Experiment: m.b. methylglyoxal 0.005 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0960 and B158DRAFT_0961 are separated by 427 nucleotides B158DRAFT_0961 and B158DRAFT_0962 overlap by 4 nucleotides
B158DRAFT_0960: B158DRAFT_0960 - Site-specific recombinases, DNA invertase Pin homologs, at 991,081 to 991,635
_0960
B158DRAFT_0961: B158DRAFT_0961 - hypothetical protein, at 992,063 to 993,115
_0961
B158DRAFT_0962: B158DRAFT_0962 - Restriction endonuclease, at 993,112 to 994,197
_0962
Position (kb) 992
993
994 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 991.094 kb on + strand at 991.094 kb on + strand at 991.150 kb on + strand, within B158DRAFT_0960 at 991.150 kb on + strand, within B158DRAFT_0960 at 991.258 kb on + strand, within B158DRAFT_0960 at 991.286 kb on + strand, within B158DRAFT_0960 at 991.294 kb on - strand, within B158DRAFT_0960 at 991.405 kb on + strand, within B158DRAFT_0960 at 991.422 kb on + strand, within B158DRAFT_0960 at 991.422 kb on + strand, within B158DRAFT_0960 at 991.430 kb on - strand, within B158DRAFT_0960 at 991.430 kb on - strand, within B158DRAFT_0960 at 991.440 kb on - strand, within B158DRAFT_0960 at 991.461 kb on - strand, within B158DRAFT_0960 at 991.492 kb on - strand, within B158DRAFT_0960 at 991.548 kb on - strand, within B158DRAFT_0960 at 991.654 kb on + strand at 991.678 kb on + strand at 991.723 kb on + strand at 991.731 kb on - strand at 991.735 kb on + strand at 991.794 kb on + strand at 991.953 kb on - strand at 991.978 kb on + strand at 992.319 kb on + strand, within B158DRAFT_0961 at 992.429 kb on - strand, within B158DRAFT_0961 at 992.431 kb on + strand, within B158DRAFT_0961 at 992.439 kb on - strand, within B158DRAFT_0961 at 992.439 kb on - strand, within B158DRAFT_0961 at 992.439 kb on - strand, within B158DRAFT_0961 at 992.793 kb on + strand, within B158DRAFT_0961 at 992.801 kb on - strand, within B158DRAFT_0961 at 992.873 kb on + strand, within B158DRAFT_0961 at 992.875 kb on + strand, within B158DRAFT_0961 at 992.883 kb on - strand, within B158DRAFT_0961 at 992.908 kb on + strand, within B158DRAFT_0961 at 992.908 kb on + strand, within B158DRAFT_0961 at 992.908 kb on + strand, within B158DRAFT_0961 at 992.913 kb on + strand, within B158DRAFT_0961 at 992.916 kb on - strand, within B158DRAFT_0961 at 992.916 kb on - strand, within B158DRAFT_0961 at 992.916 kb on - strand, within B158DRAFT_0961 at 992.916 kb on - strand, within B158DRAFT_0961 at 992.916 kb on - strand, within B158DRAFT_0961 at 992.916 kb on - strand, within B158DRAFT_0961 at 993.022 kb on + strand at 993.306 kb on + strand, within B158DRAFT_0962 at 993.314 kb on - strand, within B158DRAFT_0962 at 993.354 kb on + strand, within B158DRAFT_0962 at 993.405 kb on - strand, within B158DRAFT_0962 at 993.573 kb on + strand, within B158DRAFT_0962 at 993.581 kb on - strand, within B158DRAFT_0962 at 993.842 kb on + strand, within B158DRAFT_0962 at 993.848 kb on - strand, within B158DRAFT_0962
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.005 vol% remove 991,094 + +0.9 991,094 + +0.4 991,150 + B158DRAFT_0960 0.12 -0.5 991,150 + B158DRAFT_0960 0.12 +0.4 991,258 + B158DRAFT_0960 0.32 -0.2 991,286 + B158DRAFT_0960 0.37 +0.7 991,294 - B158DRAFT_0960 0.38 +1.0 991,405 + B158DRAFT_0960 0.58 +0.6 991,422 + B158DRAFT_0960 0.61 +0.4 991,422 + B158DRAFT_0960 0.61 +0.0 991,430 - B158DRAFT_0960 0.63 +1.5 991,430 - B158DRAFT_0960 0.63 +1.2 991,440 - B158DRAFT_0960 0.65 +0.7 991,461 - B158DRAFT_0960 0.68 -0.2 991,492 - B158DRAFT_0960 0.74 +0.4 991,548 - B158DRAFT_0960 0.84 +0.1 991,654 + +0.7 991,678 + -0.4 991,723 + +0.2 991,731 - +0.2 991,735 + +0.9 991,794 + -0.9 991,953 - -0.2 991,978 + +0.4 992,319 + B158DRAFT_0961 0.24 +1.1 992,429 - B158DRAFT_0961 0.35 +0.8 992,431 + B158DRAFT_0961 0.35 +0.4 992,439 - B158DRAFT_0961 0.36 -0.5 992,439 - B158DRAFT_0961 0.36 +0.6 992,439 - B158DRAFT_0961 0.36 +1.8 992,793 + B158DRAFT_0961 0.69 -0.0 992,801 - B158DRAFT_0961 0.70 +0.5 992,873 + B158DRAFT_0961 0.77 +1.4 992,875 + B158DRAFT_0961 0.77 -0.6 992,883 - B158DRAFT_0961 0.78 +0.5 992,908 + B158DRAFT_0961 0.80 -1.5 992,908 + B158DRAFT_0961 0.80 +0.4 992,908 + B158DRAFT_0961 0.80 +0.9 992,913 + B158DRAFT_0961 0.81 +0.6 992,916 - B158DRAFT_0961 0.81 +1.3 992,916 - B158DRAFT_0961 0.81 -0.0 992,916 - B158DRAFT_0961 0.81 -0.1 992,916 - B158DRAFT_0961 0.81 +0.7 992,916 - B158DRAFT_0961 0.81 +0.9 992,916 - B158DRAFT_0961 0.81 -0.6 993,022 + +1.0 993,306 + B158DRAFT_0962 0.18 +1.8 993,314 - B158DRAFT_0962 0.19 +0.4 993,354 + B158DRAFT_0962 0.22 -0.9 993,405 - B158DRAFT_0962 0.27 +0.0 993,573 + B158DRAFT_0962 0.42 -1.0 993,581 - B158DRAFT_0962 0.43 +0.3 993,842 + B158DRAFT_0962 0.67 -2.9 993,848 - B158DRAFT_0962 0.68 -2.2
Or see this region's nucleotide sequence