Experiment: m.b. methylglyoxal 0.005 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0904 and B158DRAFT_0905 are separated by 76 nucleotides B158DRAFT_0905 and B158DRAFT_0906 are separated by 181 nucleotides B158DRAFT_0906 and B158DRAFT_0907 are separated by 48 nucleotides
B158DRAFT_0904: B158DRAFT_0904 - 1-aminocyclopropane-1-carboxylate deaminase, at 928,282 to 929,145
_0904
B158DRAFT_0905: B158DRAFT_0905 - large conductance mechanosensitive channel protein, at 929,222 to 929,629
_0905
B158DRAFT_0906: B158DRAFT_0906 - Predicted membrane protein, at 929,811 to 930,278
_0906
B158DRAFT_0907: B158DRAFT_0907 - Predicted integral membrane protein, at 930,327 to 931,634
_0907
Position (kb) 929
930 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 928.346 kb on - strand at 928.388 kb on - strand, within B158DRAFT_0904 at 928.516 kb on + strand, within B158DRAFT_0904 at 928.620 kb on - strand, within B158DRAFT_0904 at 928.637 kb on - strand, within B158DRAFT_0904 at 928.829 kb on - strand, within B158DRAFT_0904 at 928.886 kb on - strand, within B158DRAFT_0904 at 928.893 kb on + strand, within B158DRAFT_0904 at 928.893 kb on + strand, within B158DRAFT_0904 at 928.901 kb on - strand, within B158DRAFT_0904 at 928.901 kb on - strand, within B158DRAFT_0904 at 928.901 kb on - strand, within B158DRAFT_0904 at 928.913 kb on - strand, within B158DRAFT_0904 at 928.973 kb on - strand, within B158DRAFT_0904 at 929.277 kb on + strand, within B158DRAFT_0905 at 929.280 kb on - strand, within B158DRAFT_0905 at 929.293 kb on - strand, within B158DRAFT_0905 at 929.345 kb on - strand, within B158DRAFT_0905 at 929.408 kb on + strand, within B158DRAFT_0905 at 929.408 kb on + strand, within B158DRAFT_0905 at 929.828 kb on - strand at 929.835 kb on + strand at 929.843 kb on - strand at 929.843 kb on - strand at 929.903 kb on + strand, within B158DRAFT_0906 at 929.908 kb on + strand, within B158DRAFT_0906 at 929.908 kb on + strand, within B158DRAFT_0906 at 929.913 kb on + strand, within B158DRAFT_0906 at 929.913 kb on + strand, within B158DRAFT_0906 at 929.913 kb on + strand, within B158DRAFT_0906 at 929.913 kb on + strand, within B158DRAFT_0906 at 929.913 kb on + strand, within B158DRAFT_0906 at 929.913 kb on + strand, within B158DRAFT_0906 at 929.967 kb on + strand, within B158DRAFT_0906 at 929.967 kb on + strand, within B158DRAFT_0906 at 930.060 kb on + strand, within B158DRAFT_0906 at 930.068 kb on - strand, within B158DRAFT_0906 at 930.079 kb on + strand, within B158DRAFT_0906 at 930.079 kb on + strand, within B158DRAFT_0906 at 930.087 kb on - strand, within B158DRAFT_0906 at 930.101 kb on + strand, within B158DRAFT_0906 at 930.109 kb on - strand, within B158DRAFT_0906 at 930.123 kb on + strand, within B158DRAFT_0906 at 930.134 kb on + strand, within B158DRAFT_0906 at 930.493 kb on - strand, within B158DRAFT_0907 at 930.533 kb on + strand, within B158DRAFT_0907
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.005 vol% remove 928,346 - -0.4 928,388 - B158DRAFT_0904 0.12 +1.1 928,516 + B158DRAFT_0904 0.27 +0.9 928,620 - B158DRAFT_0904 0.39 -3.7 928,637 - B158DRAFT_0904 0.41 +1.7 928,829 - B158DRAFT_0904 0.63 -0.8 928,886 - B158DRAFT_0904 0.70 +0.8 928,893 + B158DRAFT_0904 0.71 -0.1 928,893 + B158DRAFT_0904 0.71 +0.2 928,901 - B158DRAFT_0904 0.72 +0.5 928,901 - B158DRAFT_0904 0.72 +0.5 928,901 - B158DRAFT_0904 0.72 -0.2 928,913 - B158DRAFT_0904 0.73 -4.0 928,973 - B158DRAFT_0904 0.80 -0.4 929,277 + B158DRAFT_0905 0.13 +0.9 929,280 - B158DRAFT_0905 0.14 +1.6 929,293 - B158DRAFT_0905 0.17 +0.8 929,345 - B158DRAFT_0905 0.30 +0.3 929,408 + B158DRAFT_0905 0.46 +1.0 929,408 + B158DRAFT_0905 0.46 -0.1 929,828 - -0.1 929,835 + +0.5 929,843 - +0.8 929,843 - +0.7 929,903 + B158DRAFT_0906 0.20 +0.4 929,908 + B158DRAFT_0906 0.21 +0.1 929,908 + B158DRAFT_0906 0.21 +1.1 929,913 + B158DRAFT_0906 0.22 +0.4 929,913 + B158DRAFT_0906 0.22 +0.8 929,913 + B158DRAFT_0906 0.22 -1.5 929,913 + B158DRAFT_0906 0.22 +0.6 929,913 + B158DRAFT_0906 0.22 +0.2 929,913 + B158DRAFT_0906 0.22 +0.1 929,967 + B158DRAFT_0906 0.33 -2.1 929,967 + B158DRAFT_0906 0.33 +0.8 930,060 + B158DRAFT_0906 0.53 +0.8 930,068 - B158DRAFT_0906 0.55 +0.5 930,079 + B158DRAFT_0906 0.57 +0.2 930,079 + B158DRAFT_0906 0.57 -0.2 930,087 - B158DRAFT_0906 0.59 -0.1 930,101 + B158DRAFT_0906 0.62 +0.6 930,109 - B158DRAFT_0906 0.64 +1.8 930,123 + B158DRAFT_0906 0.67 +1.0 930,134 + B158DRAFT_0906 0.69 +1.1 930,493 - B158DRAFT_0907 0.13 +0.2 930,533 + B158DRAFT_0907 0.16 +0.1
Or see this region's nucleotide sequence