Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0625

Experiment: m.b. methylglyoxal 0.005 vol%

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0624 and B158DRAFT_0625 overlap by 4 nucleotidesB158DRAFT_0625 and B158DRAFT_0626 overlap by 8 nucleotidesB158DRAFT_0626 and B158DRAFT_0627 overlap by 8 nucleotides B158DRAFT_0624: B158DRAFT_0624 - Fatty-acid desaturase, at 632,804 to 633,715 _0624 B158DRAFT_0625: B158DRAFT_0625 - Predicted NAD/FAD-binding protein, at 633,712 to 634,983 _0625 B158DRAFT_0626: B158DRAFT_0626 - Uncharacterized conserved protein, at 634,976 to 635,869 _0626 B158DRAFT_0627: B158DRAFT_0627 - Cyclopropane fatty acid synthase and related methyltransferases, at 635,862 to 637,181 _0627 Position (kb) 633 634 635Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 632.851 kb on + strandat 632.856 kb on + strandat 632.856 kb on + strandat 632.866 kb on + strandat 632.906 kb on + strand, within B158DRAFT_0624at 632.906 kb on + strand, within B158DRAFT_0624at 632.947 kb on + strand, within B158DRAFT_0624at 632.947 kb on + strand, within B158DRAFT_0624at 632.955 kb on - strand, within B158DRAFT_0624at 632.955 kb on - strand, within B158DRAFT_0624at 632.955 kb on - strand, within B158DRAFT_0624at 633.087 kb on - strand, within B158DRAFT_0624at 633.090 kb on + strand, within B158DRAFT_0624at 633.098 kb on - strand, within B158DRAFT_0624at 633.098 kb on - strand, within B158DRAFT_0624at 633.098 kb on - strand, within B158DRAFT_0624at 633.098 kb on - strand, within B158DRAFT_0624at 633.100 kb on + strand, within B158DRAFT_0624at 633.100 kb on - strand, within B158DRAFT_0624at 633.108 kb on - strand, within B158DRAFT_0624at 633.108 kb on - strand, within B158DRAFT_0624at 633.182 kb on - strand, within B158DRAFT_0624at 633.182 kb on - strand, within B158DRAFT_0624at 633.251 kb on + strand, within B158DRAFT_0624at 633.259 kb on - strand, within B158DRAFT_0624at 633.270 kb on + strand, within B158DRAFT_0624at 633.278 kb on - strand, within B158DRAFT_0624at 633.326 kb on + strand, within B158DRAFT_0624at 633.326 kb on + strand, within B158DRAFT_0624at 633.326 kb on + strand, within B158DRAFT_0624at 633.326 kb on + strand, within B158DRAFT_0624at 633.339 kb on + strand, within B158DRAFT_0624at 633.366 kb on + strand, within B158DRAFT_0624at 633.366 kb on + strand, within B158DRAFT_0624at 633.374 kb on - strand, within B158DRAFT_0624at 633.395 kb on + strand, within B158DRAFT_0624at 633.395 kb on + strand, within B158DRAFT_0624at 633.403 kb on - strand, within B158DRAFT_0624at 633.530 kb on + strand, within B158DRAFT_0624at 633.530 kb on + strand, within B158DRAFT_0624at 633.530 kb on + strand, within B158DRAFT_0624at 633.538 kb on - strand, within B158DRAFT_0624at 633.665 kb on + strandat 633.803 kb on + strandat 633.907 kb on + strand, within B158DRAFT_0625at 633.985 kb on - strand, within B158DRAFT_0625at 634.011 kb on - strand, within B158DRAFT_0625at 634.232 kb on - strand, within B158DRAFT_0625at 634.234 kb on - strand, within B158DRAFT_0625at 634.241 kb on - strand, within B158DRAFT_0625at 634.296 kb on - strand, within B158DRAFT_0625at 634.343 kb on + strand, within B158DRAFT_0625at 634.460 kb on + strand, within B158DRAFT_0625at 634.639 kb on + strand, within B158DRAFT_0625at 634.639 kb on + strand, within B158DRAFT_0625at 634.683 kb on + strand, within B158DRAFT_0625at 634.686 kb on - strand, within B158DRAFT_0625at 634.775 kb on + strand, within B158DRAFT_0625at 634.778 kb on - strand, within B158DRAFT_0625at 634.814 kb on - strand, within B158DRAFT_0625at 634.872 kb on + strandat 634.872 kb on + strandat 634.880 kb on - strandat 634.975 kb on - strandat 635.004 kb on + strandat 635.034 kb on - strandat 635.034 kb on - strandat 635.177 kb on - strand, within B158DRAFT_0626at 635.332 kb on - strand, within B158DRAFT_0626at 635.511 kb on - strand, within B158DRAFT_0626at 635.569 kb on + strand, within B158DRAFT_0626at 635.569 kb on + strand, within B158DRAFT_0626at 635.569 kb on + strand, within B158DRAFT_0626at 635.577 kb on - strand, within B158DRAFT_0626at 635.577 kb on - strand, within B158DRAFT_0626at 635.577 kb on - strand, within B158DRAFT_0626at 635.699 kb on + strand, within B158DRAFT_0626at 635.699 kb on + strand, within B158DRAFT_0626at 635.699 kb on + strand, within B158DRAFT_0626at 635.704 kb on + strand, within B158DRAFT_0626at 635.704 kb on + strand, within B158DRAFT_0626at 635.712 kb on - strand, within B158DRAFT_0626at 635.720 kb on + strand, within B158DRAFT_0626at 635.836 kb on - strandat 635.885 kb on + strandat 635.885 kb on + strandat 635.906 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.005 vol%
remove
632,851 + -0.3
632,856 + +0.7
632,856 + +0.1
632,866 + +0.5
632,906 + B158DRAFT_0624 0.11 +0.3
632,906 + B158DRAFT_0624 0.11 +0.4
632,947 + B158DRAFT_0624 0.16 +0.5
632,947 + B158DRAFT_0624 0.16 +0.4
632,955 - B158DRAFT_0624 0.17 +0.0
632,955 - B158DRAFT_0624 0.17 +1.2
632,955 - B158DRAFT_0624 0.17 +0.0
633,087 - B158DRAFT_0624 0.31 +0.5
633,090 + B158DRAFT_0624 0.31 +0.1
633,098 - B158DRAFT_0624 0.32 +0.5
633,098 - B158DRAFT_0624 0.32 -2.3
633,098 - B158DRAFT_0624 0.32 +0.5
633,098 - B158DRAFT_0624 0.32 +0.7
633,100 + B158DRAFT_0624 0.32 -0.7
633,100 - B158DRAFT_0624 0.32 +0.1
633,108 - B158DRAFT_0624 0.33 -0.1
633,108 - B158DRAFT_0624 0.33 +0.1
633,182 - B158DRAFT_0624 0.41 +0.2
633,182 - B158DRAFT_0624 0.41 +0.9
633,251 + B158DRAFT_0624 0.49 +1.1
633,259 - B158DRAFT_0624 0.50 -0.0
633,270 + B158DRAFT_0624 0.51 -0.1
633,278 - B158DRAFT_0624 0.52 +0.3
633,326 + B158DRAFT_0624 0.57 -0.9
633,326 + B158DRAFT_0624 0.57 +1.1
633,326 + B158DRAFT_0624 0.57 +0.3
633,326 + B158DRAFT_0624 0.57 -0.7
633,339 + B158DRAFT_0624 0.59 -0.7
633,366 + B158DRAFT_0624 0.62 -0.3
633,366 + B158DRAFT_0624 0.62 +0.7
633,374 - B158DRAFT_0624 0.62 +0.3
633,395 + B158DRAFT_0624 0.65 +0.7
633,395 + B158DRAFT_0624 0.65 -1.1
633,403 - B158DRAFT_0624 0.66 +1.3
633,530 + B158DRAFT_0624 0.80 +0.6
633,530 + B158DRAFT_0624 0.80 -0.3
633,530 + B158DRAFT_0624 0.80 +1.0
633,538 - B158DRAFT_0624 0.80 -0.3
633,665 + -0.0
633,803 + -0.1
633,907 + B158DRAFT_0625 0.15 +0.4
633,985 - B158DRAFT_0625 0.21 +2.8
634,011 - B158DRAFT_0625 0.24 -0.0
634,232 - B158DRAFT_0625 0.41 +0.1
634,234 - B158DRAFT_0625 0.41 +0.2
634,241 - B158DRAFT_0625 0.42 -0.1
634,296 - B158DRAFT_0625 0.46 -0.1
634,343 + B158DRAFT_0625 0.50 -2.2
634,460 + B158DRAFT_0625 0.59 +0.5
634,639 + B158DRAFT_0625 0.73 +0.3
634,639 + B158DRAFT_0625 0.73 +0.4
634,683 + B158DRAFT_0625 0.76 -0.1
634,686 - B158DRAFT_0625 0.77 +0.9
634,775 + B158DRAFT_0625 0.84 +0.4
634,778 - B158DRAFT_0625 0.84 +0.3
634,814 - B158DRAFT_0625 0.87 +1.1
634,872 + +0.6
634,872 + +0.9
634,880 - -0.7
634,975 - +0.2
635,004 + +0.1
635,034 - +0.6
635,034 - +0.4
635,177 - B158DRAFT_0626 0.22 +0.4
635,332 - B158DRAFT_0626 0.40 +0.3
635,511 - B158DRAFT_0626 0.60 -1.9
635,569 + B158DRAFT_0626 0.66 -2.4
635,569 + B158DRAFT_0626 0.66 -3.0
635,569 + B158DRAFT_0626 0.66 +1.9
635,577 - B158DRAFT_0626 0.67 -0.5
635,577 - B158DRAFT_0626 0.67 +1.3
635,577 - B158DRAFT_0626 0.67 -1.0
635,699 + B158DRAFT_0626 0.81 +0.7
635,699 + B158DRAFT_0626 0.81 -0.3
635,699 + B158DRAFT_0626 0.81 -0.1
635,704 + B158DRAFT_0626 0.81 +0.5
635,704 + B158DRAFT_0626 0.81 -0.2
635,712 - B158DRAFT_0626 0.82 +0.5
635,720 + B158DRAFT_0626 0.83 +0.2
635,836 - -1.6
635,885 + -0.4
635,885 + -3.8
635,906 + +0.9

Or see this region's nucleotide sequence