Experiment: m.b. methylglyoxal 0.005 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0596 and B158DRAFT_0597 overlap by 7 nucleotides B158DRAFT_0597 and B158DRAFT_0598 are separated by 17 nucleotides B158DRAFT_0598 and B158DRAFT_0599 are separated by 123 nucleotides B158DRAFT_0599 and B158DRAFT_0600 are separated by 319 nucleotides
B158DRAFT_0596: B158DRAFT_0596 - RNA polymerase sigma factor, sigma-70 family, at 602,321 to 602,971
_0596
B158DRAFT_0597: B158DRAFT_0597 - hypothetical protein, at 602,965 to 603,207
_0597
B158DRAFT_0598: B158DRAFT_0598 - Beta-barrel assembly machine subunit BamE, at 603,225 to 603,545
_0598
B158DRAFT_0599: B158DRAFT_0599 - Fe2+/Zn2+ uptake regulation proteins, at 603,669 to 604,070
_0599
B158DRAFT_0600: B158DRAFT_0600 - hypothetical protein, at 604,390 to 605,163
_0600
Position (kb) 603
604
605 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 602.699 kb on - strand, within B158DRAFT_0596 at 602.739 kb on - strand, within B158DRAFT_0596 at 602.765 kb on + strand, within B158DRAFT_0596 at 602.786 kb on + strand, within B158DRAFT_0596 at 602.794 kb on - strand, within B158DRAFT_0596 at 602.794 kb on - strand, within B158DRAFT_0596 at 602.804 kb on + strand, within B158DRAFT_0596 at 602.879 kb on - strand, within B158DRAFT_0596 at 602.879 kb on - strand, within B158DRAFT_0596 at 602.980 kb on + strand at 603.013 kb on - strand, within B158DRAFT_0597 at 603.042 kb on + strand, within B158DRAFT_0597 at 603.235 kb on + strand at 603.253 kb on - strand at 603.432 kb on - strand, within B158DRAFT_0598 at 603.697 kb on + strand at 603.718 kb on + strand, within B158DRAFT_0599 at 603.726 kb on - strand, within B158DRAFT_0599 at 603.745 kb on + strand, within B158DRAFT_0599 at 603.764 kb on - strand, within B158DRAFT_0599 at 603.769 kb on - strand, within B158DRAFT_0599 at 603.786 kb on + strand, within B158DRAFT_0599 at 603.866 kb on - strand, within B158DRAFT_0599 at 603.877 kb on + strand, within B158DRAFT_0599 at 603.878 kb on + strand, within B158DRAFT_0599 at 603.886 kb on - strand, within B158DRAFT_0599 at 604.047 kb on - strand at 604.047 kb on - strand at 604.113 kb on + strand at 604.121 kb on - strand at 604.127 kb on - strand at 604.143 kb on + strand at 604.143 kb on - strand at 604.190 kb on + strand at 604.191 kb on + strand at 604.211 kb on - strand at 604.361 kb on + strand at 604.369 kb on - strand at 604.369 kb on - strand at 604.500 kb on - strand, within B158DRAFT_0600 at 604.572 kb on + strand, within B158DRAFT_0600 at 604.572 kb on + strand, within B158DRAFT_0600 at 604.580 kb on - strand, within B158DRAFT_0600 at 604.580 kb on - strand, within B158DRAFT_0600 at 604.620 kb on - strand, within B158DRAFT_0600 at 604.635 kb on - strand, within B158DRAFT_0600 at 604.738 kb on + strand, within B158DRAFT_0600 at 604.770 kb on - strand, within B158DRAFT_0600 at 604.937 kb on + strand, within B158DRAFT_0600 at 604.956 kb on + strand, within B158DRAFT_0600 at 604.956 kb on + strand, within B158DRAFT_0600 at 604.956 kb on + strand, within B158DRAFT_0600 at 604.956 kb on + strand, within B158DRAFT_0600 at 604.956 kb on + strand, within B158DRAFT_0600 at 604.956 kb on + strand, within B158DRAFT_0600 at 604.956 kb on + strand, within B158DRAFT_0600 at 604.956 kb on + strand, within B158DRAFT_0600 at 604.956 kb on + strand, within B158DRAFT_0600 at 604.958 kb on + strand, within B158DRAFT_0600 at 604.958 kb on - strand, within B158DRAFT_0600 at 604.964 kb on - strand, within B158DRAFT_0600 at 604.964 kb on - strand, within B158DRAFT_0600 at 604.964 kb on - strand, within B158DRAFT_0600 at 604.964 kb on - strand, within B158DRAFT_0600 at 604.964 kb on - strand, within B158DRAFT_0600 at 604.964 kb on - strand, within B158DRAFT_0600 at 604.964 kb on - strand, within B158DRAFT_0600 at 604.964 kb on - strand, within B158DRAFT_0600 at 604.964 kb on - strand, within B158DRAFT_0600 at 604.964 kb on - strand, within B158DRAFT_0600 at 604.966 kb on - strand, within B158DRAFT_0600 at 605.004 kb on + strand, within B158DRAFT_0600
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.005 vol% remove 602,699 - B158DRAFT_0596 0.58 +0.6 602,739 - B158DRAFT_0596 0.64 -0.1 602,765 + B158DRAFT_0596 0.68 +0.7 602,786 + B158DRAFT_0596 0.71 +1.0 602,794 - B158DRAFT_0596 0.73 +0.8 602,794 - B158DRAFT_0596 0.73 -0.5 602,804 + B158DRAFT_0596 0.74 +1.5 602,879 - B158DRAFT_0596 0.86 -0.0 602,879 - B158DRAFT_0596 0.86 +0.6 602,980 + +0.8 603,013 - B158DRAFT_0597 0.20 +1.3 603,042 + B158DRAFT_0597 0.32 +0.5 603,235 + +0.6 603,253 - +1.1 603,432 - B158DRAFT_0598 0.64 -2.2 603,697 + -2.1 603,718 + B158DRAFT_0599 0.12 -4.7 603,726 - B158DRAFT_0599 0.14 -4.6 603,745 + B158DRAFT_0599 0.19 +0.4 603,764 - B158DRAFT_0599 0.24 -1.1 603,769 - B158DRAFT_0599 0.25 -2.4 603,786 + B158DRAFT_0599 0.29 -3.1 603,866 - B158DRAFT_0599 0.49 -2.9 603,877 + B158DRAFT_0599 0.52 -0.7 603,878 + B158DRAFT_0599 0.52 -3.2 603,886 - B158DRAFT_0599 0.54 -4.0 604,047 - -2.3 604,047 - -2.2 604,113 + -0.7 604,121 - -1.6 604,127 - +0.4 604,143 + -0.3 604,143 - +0.5 604,190 + -0.6 604,191 + +1.4 604,211 - -2.5 604,361 + +0.8 604,369 - +1.3 604,369 - +0.6 604,500 - B158DRAFT_0600 0.14 +0.7 604,572 + B158DRAFT_0600 0.24 +0.4 604,572 + B158DRAFT_0600 0.24 -1.1 604,580 - B158DRAFT_0600 0.25 +0.9 604,580 - B158DRAFT_0600 0.25 -0.7 604,620 - B158DRAFT_0600 0.30 +1.0 604,635 - B158DRAFT_0600 0.32 -0.1 604,738 + B158DRAFT_0600 0.45 +0.6 604,770 - B158DRAFT_0600 0.49 -0.1 604,937 + B158DRAFT_0600 0.71 +0.2 604,956 + B158DRAFT_0600 0.73 -0.0 604,956 + B158DRAFT_0600 0.73 +0.2 604,956 + B158DRAFT_0600 0.73 +0.2 604,956 + B158DRAFT_0600 0.73 -0.9 604,956 + B158DRAFT_0600 0.73 +0.7 604,956 + B158DRAFT_0600 0.73 +0.9 604,956 + B158DRAFT_0600 0.73 +0.7 604,956 + B158DRAFT_0600 0.73 -0.8 604,956 + B158DRAFT_0600 0.73 +0.8 604,958 + B158DRAFT_0600 0.73 -0.7 604,958 - B158DRAFT_0600 0.73 +1.3 604,964 - B158DRAFT_0600 0.74 +0.6 604,964 - B158DRAFT_0600 0.74 -0.3 604,964 - B158DRAFT_0600 0.74 -0.3 604,964 - B158DRAFT_0600 0.74 -1.3 604,964 - B158DRAFT_0600 0.74 +0.5 604,964 - B158DRAFT_0600 0.74 +0.2 604,964 - B158DRAFT_0600 0.74 -0.4 604,964 - B158DRAFT_0600 0.74 +0.5 604,964 - B158DRAFT_0600 0.74 -0.3 604,964 - B158DRAFT_0600 0.74 +1.4 604,966 - B158DRAFT_0600 0.74 +0.3 605,004 + B158DRAFT_0600 0.79 +0.2
Or see this region's nucleotide sequence