Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0487

Experiment: m.b. methylglyoxal 0.005 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0486 and B158DRAFT_0487 are separated by 37 nucleotidesB158DRAFT_0487 and B158DRAFT_0488 are separated by 74 nucleotidesB158DRAFT_0488 and B158DRAFT_0489 are separated by 60 nucleotides B158DRAFT_0486: B158DRAFT_0486 - iron-sulfur cluster binding protein, putative, at 486,608 to 487,756 _0486 B158DRAFT_0487: B158DRAFT_0487 - Cytochrome c5, at 487,794 to 488,108 _0487 B158DRAFT_0488: B158DRAFT_0488 - Cytochrome c5, at 488,183 to 488,623 _0488 B158DRAFT_0489: B158DRAFT_0489 - uncharacterized domain 1, at 488,684 to 489,307 _0489 Position (kb) 487 488 489Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 486.855 kb on + strand, within B158DRAFT_0486at 486.889 kb on - strand, within B158DRAFT_0486at 486.889 kb on - strand, within B158DRAFT_0486at 486.897 kb on - strand, within B158DRAFT_0486at 486.902 kb on - strand, within B158DRAFT_0486at 486.926 kb on - strand, within B158DRAFT_0486at 486.926 kb on - strand, within B158DRAFT_0486at 486.984 kb on + strand, within B158DRAFT_0486at 487.044 kb on - strand, within B158DRAFT_0486at 487.141 kb on + strand, within B158DRAFT_0486at 487.141 kb on + strand, within B158DRAFT_0486at 487.149 kb on - strand, within B158DRAFT_0486at 487.173 kb on + strand, within B158DRAFT_0486at 487.181 kb on - strand, within B158DRAFT_0486at 487.265 kb on + strand, within B158DRAFT_0486at 487.285 kb on + strand, within B158DRAFT_0486at 487.376 kb on + strand, within B158DRAFT_0486at 487.433 kb on + strand, within B158DRAFT_0486at 487.541 kb on - strand, within B158DRAFT_0486at 487.618 kb on + strand, within B158DRAFT_0486at 487.630 kb on + strand, within B158DRAFT_0486at 487.647 kb on - strandat 487.672 kb on - strandat 487.680 kb on - strandat 487.769 kb on + strandat 487.818 kb on + strandat 487.818 kb on + strandat 487.818 kb on + strandat 487.820 kb on - strandat 487.826 kb on - strand, within B158DRAFT_0487at 487.864 kb on + strand, within B158DRAFT_0487at 487.864 kb on + strand, within B158DRAFT_0487at 487.864 kb on + strand, within B158DRAFT_0487at 487.872 kb on - strand, within B158DRAFT_0487at 487.872 kb on - strand, within B158DRAFT_0487at 487.872 kb on - strand, within B158DRAFT_0487at 487.887 kb on - strand, within B158DRAFT_0487at 487.929 kb on - strand, within B158DRAFT_0487at 487.954 kb on - strand, within B158DRAFT_0487at 487.970 kb on - strand, within B158DRAFT_0487at 487.970 kb on - strand, within B158DRAFT_0487at 488.032 kb on - strand, within B158DRAFT_0487at 488.042 kb on + strand, within B158DRAFT_0487at 488.042 kb on + strand, within B158DRAFT_0487at 488.050 kb on - strand, within B158DRAFT_0487at 488.096 kb on - strandat 488.168 kb on + strandat 488.173 kb on + strandat 488.239 kb on + strand, within B158DRAFT_0488at 488.243 kb on - strand, within B158DRAFT_0488at 488.299 kb on - strand, within B158DRAFT_0488at 488.312 kb on - strand, within B158DRAFT_0488at 488.322 kb on + strand, within B158DRAFT_0488at 488.322 kb on + strand, within B158DRAFT_0488at 488.397 kb on + strand, within B158DRAFT_0488at 488.410 kb on + strand, within B158DRAFT_0488at 488.410 kb on + strand, within B158DRAFT_0488at 488.418 kb on - strand, within B158DRAFT_0488at 488.418 kb on - strand, within B158DRAFT_0488at 488.508 kb on + strand, within B158DRAFT_0488at 488.516 kb on - strand, within B158DRAFT_0488at 488.516 kb on - strand, within B158DRAFT_0488at 488.516 kb on - strand, within B158DRAFT_0488at 488.545 kb on + strand, within B158DRAFT_0488at 488.619 kb on + strandat 488.637 kb on + strandat 488.637 kb on + strandat 488.637 kb on + strandat 488.637 kb on + strandat 488.637 kb on + strandat 488.645 kb on - strandat 488.645 kb on - strandat 488.645 kb on - strandat 488.645 kb on - strandat 488.645 kb on - strandat 488.645 kb on - strandat 488.645 kb on - strandat 488.652 kb on - strandat 488.654 kb on + strandat 488.692 kb on + strandat 488.700 kb on - strandat 488.814 kb on - strand, within B158DRAFT_0489at 488.836 kb on - strand, within B158DRAFT_0489at 488.916 kb on + strand, within B158DRAFT_0489at 489.038 kb on + strand, within B158DRAFT_0489at 489.038 kb on + strand, within B158DRAFT_0489at 489.038 kb on + strand, within B158DRAFT_0489

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.005 vol%
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486,855 + B158DRAFT_0486 0.21 -0.8
486,889 - B158DRAFT_0486 0.24 -0.3
486,889 - B158DRAFT_0486 0.24 -0.3
486,897 - B158DRAFT_0486 0.25 +2.1
486,902 - B158DRAFT_0486 0.26 -0.8
486,926 - B158DRAFT_0486 0.28 +0.3
486,926 - B158DRAFT_0486 0.28 -3.1
486,984 + B158DRAFT_0486 0.33 +0.4
487,044 - B158DRAFT_0486 0.38 +0.2
487,141 + B158DRAFT_0486 0.46 -0.1
487,141 + B158DRAFT_0486 0.46 -0.3
487,149 - B158DRAFT_0486 0.47 +0.2
487,173 + B158DRAFT_0486 0.49 -0.7
487,181 - B158DRAFT_0486 0.50 +0.1
487,265 + B158DRAFT_0486 0.57 +0.7
487,285 + B158DRAFT_0486 0.59 -1.9
487,376 + B158DRAFT_0486 0.67 +0.2
487,433 + B158DRAFT_0486 0.72 +0.2
487,541 - B158DRAFT_0486 0.81 +0.1
487,618 + B158DRAFT_0486 0.88 +2.7
487,630 + B158DRAFT_0486 0.89 +0.1
487,647 - -2.1
487,672 - +0.4
487,680 - +0.1
487,769 + +0.2
487,818 + -0.6
487,818 + -1.4
487,818 + -2.2
487,820 - +0.3
487,826 - B158DRAFT_0487 0.10 -1.0
487,864 + B158DRAFT_0487 0.22 -0.4
487,864 + B158DRAFT_0487 0.22 -1.4
487,864 + B158DRAFT_0487 0.22 -3.8
487,872 - B158DRAFT_0487 0.25 -1.8
487,872 - B158DRAFT_0487 0.25 -1.8
487,872 - B158DRAFT_0487 0.25 -0.5
487,887 - B158DRAFT_0487 0.30 -0.4
487,929 - B158DRAFT_0487 0.43 -1.5
487,954 - B158DRAFT_0487 0.51 -0.1
487,970 - B158DRAFT_0487 0.56 -1.3
487,970 - B158DRAFT_0487 0.56 -0.5
488,032 - B158DRAFT_0487 0.76 +0.9
488,042 + B158DRAFT_0487 0.79 -2.1
488,042 + B158DRAFT_0487 0.79 -1.4
488,050 - B158DRAFT_0487 0.81 -3.1
488,096 - -0.0
488,168 + -1.6
488,173 + -3.0
488,239 + B158DRAFT_0488 0.13 -0.8
488,243 - B158DRAFT_0488 0.14 -2.1
488,299 - B158DRAFT_0488 0.26 -1.4
488,312 - B158DRAFT_0488 0.29 -0.8
488,322 + B158DRAFT_0488 0.32 -2.0
488,322 + B158DRAFT_0488 0.32 -1.3
488,397 + B158DRAFT_0488 0.49 -2.1
488,410 + B158DRAFT_0488 0.51 -2.3
488,410 + B158DRAFT_0488 0.51 -1.7
488,418 - B158DRAFT_0488 0.53 -1.5
488,418 - B158DRAFT_0488 0.53 -1.2
488,508 + B158DRAFT_0488 0.74 -0.8
488,516 - B158DRAFT_0488 0.76 +0.5
488,516 - B158DRAFT_0488 0.76 -0.1
488,516 - B158DRAFT_0488 0.76 +0.5
488,545 + B158DRAFT_0488 0.82 -1.8
488,619 + -0.7
488,637 + +0.0
488,637 + -2.0
488,637 + -1.5
488,637 + -1.7
488,637 + -2.7
488,645 - -1.2
488,645 - -2.1
488,645 - -0.6
488,645 - -1.2
488,645 - -0.5
488,645 - +0.3
488,645 - -1.8
488,652 - -0.7
488,654 + -1.2
488,692 + +1.4
488,700 - +0.7
488,814 - B158DRAFT_0489 0.21 +1.4
488,836 - B158DRAFT_0489 0.24 -0.1
488,916 + B158DRAFT_0489 0.37 +0.7
489,038 + B158DRAFT_0489 0.57 -4.9
489,038 + B158DRAFT_0489 0.57 +0.1
489,038 + B158DRAFT_0489 0.57 -0.0

Or see this region's nucleotide sequence