Experiment: m.b. methylglyoxal 0.005 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0335 and B158DRAFT_0336 are separated by 249 nucleotides B158DRAFT_0336 and B158DRAFT_0337 are separated by 103 nucleotides B158DRAFT_0337 and B158DRAFT_0338 are separated by 191 nucleotides B158DRAFT_0338 and B158DRAFT_0339 are separated by 64 nucleotides
B158DRAFT_0335: B158DRAFT_0335 - Signal transduction histidine kinase, at 337,197 to 338,639
_0335
B158DRAFT_0336: B158DRAFT_0336 - hypothetical protein, at 338,889 to 339,176
_0336
B158DRAFT_0337: B158DRAFT_0337 - hypothetical protein, at 339,280 to 339,687
_0337
B158DRAFT_0338: B158DRAFT_0338 - hypothetical protein, at 339,879 to 340,409
_0338
B158DRAFT_0339: B158DRAFT_0339 - hypothetical protein, at 340,474 to 341,049
_0339
Position (kb) 339
340 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 338.383 kb on + strand, within B158DRAFT_0335 at 338.408 kb on - strand, within B158DRAFT_0335 at 338.486 kb on - strand, within B158DRAFT_0335 at 338.514 kb on - strand at 338.571 kb on + strand at 338.676 kb on - strand at 338.689 kb on + strand at 338.720 kb on + strand at 338.749 kb on + strand at 338.757 kb on + strand at 338.860 kb on + strand at 338.894 kb on + strand at 338.920 kb on + strand, within B158DRAFT_0336 at 339.007 kb on + strand, within B158DRAFT_0336 at 339.209 kb on + strand at 339.226 kb on + strand at 339.329 kb on - strand, within B158DRAFT_0337 at 339.371 kb on + strand, within B158DRAFT_0337 at 339.379 kb on - strand, within B158DRAFT_0337 at 339.379 kb on - strand, within B158DRAFT_0337 at 339.403 kb on - strand, within B158DRAFT_0337 at 339.418 kb on + strand, within B158DRAFT_0337 at 339.619 kb on - strand, within B158DRAFT_0337 at 339.839 kb on + strand at 339.884 kb on - strand at 339.884 kb on - strand at 339.886 kb on + strand at 339.913 kb on - strand at 339.913 kb on - strand at 340.105 kb on - strand, within B158DRAFT_0338 at 340.136 kb on + strand, within B158DRAFT_0338 at 340.395 kb on - strand at 340.538 kb on - strand, within B158DRAFT_0339 at 340.557 kb on - strand, within B158DRAFT_0339 at 340.680 kb on + strand, within B158DRAFT_0339
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.005 vol% remove 338,383 + B158DRAFT_0335 0.82 +1.4 338,408 - B158DRAFT_0335 0.84 +2.0 338,486 - B158DRAFT_0335 0.89 +0.3 338,514 - -0.7 338,571 + -1.3 338,676 - +0.3 338,689 + +0.2 338,720 + +0.2 338,749 + +0.5 338,757 + -0.1 338,860 + +0.4 338,894 + +1.6 338,920 + B158DRAFT_0336 0.11 +0.2 339,007 + B158DRAFT_0336 0.41 -4.6 339,209 + +0.1 339,226 + +0.5 339,329 - B158DRAFT_0337 0.12 +0.4 339,371 + B158DRAFT_0337 0.22 -0.7 339,379 - B158DRAFT_0337 0.24 -1.7 339,379 - B158DRAFT_0337 0.24 +0.6 339,403 - B158DRAFT_0337 0.30 +0.8 339,418 + B158DRAFT_0337 0.34 +0.0 339,619 - B158DRAFT_0337 0.83 +0.5 339,839 + +0.9 339,884 - +0.4 339,884 - -0.8 339,886 + -0.0 339,913 - +0.0 339,913 - +0.9 340,105 - B158DRAFT_0338 0.43 -0.3 340,136 + B158DRAFT_0338 0.48 +0.4 340,395 - +0.5 340,538 - B158DRAFT_0339 0.11 +0.1 340,557 - B158DRAFT_0339 0.14 -0.9 340,680 + B158DRAFT_0339 0.36 -0.6
Or see this region's nucleotide sequence