Experiment: m.b. methylglyoxal 0.005 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0309 and B158DRAFT_0310 are separated by 65 nucleotides B158DRAFT_0310 and B158DRAFT_0311 are separated by 86 nucleotides B158DRAFT_0311 and B158DRAFT_0312 are separated by 207 nucleotides B158DRAFT_0312 and B158DRAFT_0313 are separated by 22 nucleotides B158DRAFT_0313 and B158DRAFT_0314 overlap by 4 nucleotides
B158DRAFT_0309: B158DRAFT_0309 - diguanylate cyclase (GGDEF) domain, at 314,259 to 315,437
_0309
B158DRAFT_0310: B158DRAFT_0310 - Uncharacterized conserved protein, at 315,503 to 315,787
_0310
B158DRAFT_0311: B158DRAFT_0311 - hypothetical protein, at 315,874 to 316,572
_0311
B158DRAFT_0312: B158DRAFT_0312 - hypothetical protein, at 316,780 to 317,160
_0312
B158DRAFT_0313: B158DRAFT_0313 - hypothetical protein, at 317,183 to 317,380
_0313
B158DRAFT_0314: B158DRAFT_0314 - hypothetical protein, at 317,377 to 317,808
_0314
Position (kb) 315
316
317 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 315.076 kb on + strand, within B158DRAFT_0309 at 315.120 kb on + strand, within B158DRAFT_0309 at 315.202 kb on + strand, within B158DRAFT_0309 at 315.212 kb on + strand, within B158DRAFT_0309 at 315.317 kb on + strand, within B158DRAFT_0309 at 315.383 kb on + strand at 315.571 kb on + strand, within B158DRAFT_0310 at 315.579 kb on - strand, within B158DRAFT_0310 at 315.579 kb on - strand, within B158DRAFT_0310 at 315.794 kb on + strand at 315.834 kb on - strand at 315.989 kb on + strand, within B158DRAFT_0311 at 315.997 kb on - strand, within B158DRAFT_0311 at 316.010 kb on + strand, within B158DRAFT_0311 at 316.172 kb on + strand, within B158DRAFT_0311 at 316.201 kb on + strand, within B158DRAFT_0311 at 316.201 kb on + strand, within B158DRAFT_0311 at 316.201 kb on - strand, within B158DRAFT_0311 at 316.209 kb on - strand, within B158DRAFT_0311 at 316.225 kb on + strand, within B158DRAFT_0311 at 316.238 kb on - strand, within B158DRAFT_0311 at 316.304 kb on + strand, within B158DRAFT_0311 at 316.371 kb on - strand, within B158DRAFT_0311 at 316.681 kb on - strand at 316.795 kb on - strand at 316.949 kb on + strand, within B158DRAFT_0312 at 316.990 kb on + strand, within B158DRAFT_0312 at 317.201 kb on - strand at 317.297 kb on + strand, within B158DRAFT_0313 at 317.304 kb on - strand, within B158DRAFT_0313 at 317.361 kb on - strand at 317.433 kb on - strand, within B158DRAFT_0314 at 317.446 kb on + strand, within B158DRAFT_0314 at 317.465 kb on - strand, within B158DRAFT_0314
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.005 vol% remove 315,076 + B158DRAFT_0309 0.69 +0.1 315,120 + B158DRAFT_0309 0.73 +1.4 315,202 + B158DRAFT_0309 0.80 +0.8 315,212 + B158DRAFT_0309 0.81 -0.2 315,317 + B158DRAFT_0309 0.90 +0.6 315,383 + +0.6 315,571 + B158DRAFT_0310 0.24 -0.5 315,579 - B158DRAFT_0310 0.27 -0.3 315,579 - B158DRAFT_0310 0.27 +0.1 315,794 + +0.7 315,834 - +1.0 315,989 + B158DRAFT_0311 0.16 +1.1 315,997 - B158DRAFT_0311 0.18 +0.2 316,010 + B158DRAFT_0311 0.19 +0.9 316,172 + B158DRAFT_0311 0.43 +0.3 316,201 + B158DRAFT_0311 0.47 +0.7 316,201 + B158DRAFT_0311 0.47 +0.4 316,201 - B158DRAFT_0311 0.47 +0.9 316,209 - B158DRAFT_0311 0.48 -0.7 316,225 + B158DRAFT_0311 0.50 +1.0 316,238 - B158DRAFT_0311 0.52 +1.0 316,304 + B158DRAFT_0311 0.62 -0.7 316,371 - B158DRAFT_0311 0.71 +0.9 316,681 - +0.1 316,795 - +0.3 316,949 + B158DRAFT_0312 0.44 +0.9 316,990 + B158DRAFT_0312 0.55 +0.1 317,201 - +0.7 317,297 + B158DRAFT_0313 0.58 +0.9 317,304 - B158DRAFT_0313 0.61 -0.2 317,361 - +0.0 317,433 - B158DRAFT_0314 0.13 -3.7 317,446 + B158DRAFT_0314 0.16 +0.0 317,465 - B158DRAFT_0314 0.20 -0.3
Or see this region's nucleotide sequence