Experiment: m.b. methylglyoxal 0.005 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0243 and B158DRAFT_0244 are separated by 3 nucleotides B158DRAFT_0244 and B158DRAFT_0245 are separated by 14 nucleotides B158DRAFT_0245 and B158DRAFT_0246 are separated by 98 nucleotides B158DRAFT_0246 and B158DRAFT_0247 overlap by 4 nucleotides
B158DRAFT_0243: B158DRAFT_0243 - haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E, at 251,542 to 252,207
_0243
B158DRAFT_0244: B158DRAFT_0244 - tyrosine recombinase XerC subunit, at 252,211 to 253,110
_0244
B158DRAFT_0245: B158DRAFT_0245 - Uncharacterized protein conserved in bacteria, at 253,125 to 253,802
_0245
B158DRAFT_0246: B158DRAFT_0246 - diaminopimelate epimerase (EC 5.1.1.7), at 253,901 to 254,731
_0246
B158DRAFT_0247: B158DRAFT_0247 - hypothetical protein, at 254,728 to 254,955
_0247
Position (kb) 253
254 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 252.325 kb on + strand, within B158DRAFT_0244 at 252.335 kb on + strand, within B158DRAFT_0244 at 252.379 kb on - strand, within B158DRAFT_0244 at 252.379 kb on - strand, within B158DRAFT_0244 at 252.648 kb on + strand, within B158DRAFT_0244 at 252.827 kb on - strand, within B158DRAFT_0244 at 252.885 kb on - strand, within B158DRAFT_0244 at 252.887 kb on + strand, within B158DRAFT_0244 at 252.887 kb on + strand, within B158DRAFT_0244 at 252.897 kb on + strand, within B158DRAFT_0244 at 252.963 kb on - strand, within B158DRAFT_0244 at 253.188 kb on + strand at 253.224 kb on + strand, within B158DRAFT_0245 at 253.224 kb on + strand, within B158DRAFT_0245 at 253.418 kb on - strand, within B158DRAFT_0245 at 253.418 kb on - strand, within B158DRAFT_0245 at 253.495 kb on + strand, within B158DRAFT_0245 at 253.538 kb on + strand, within B158DRAFT_0245 at 253.538 kb on + strand, within B158DRAFT_0245 at 253.572 kb on - strand, within B158DRAFT_0245 at 253.673 kb on - strand, within B158DRAFT_0245 at 253.692 kb on - strand, within B158DRAFT_0245 at 253.692 kb on - strand, within B158DRAFT_0245
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.005 vol% remove 252,325 + B158DRAFT_0244 0.13 -4.0 252,335 + B158DRAFT_0244 0.14 -1.6 252,379 - B158DRAFT_0244 0.19 -2.6 252,379 - B158DRAFT_0244 0.19 -4.6 252,648 + B158DRAFT_0244 0.49 -3.4 252,827 - B158DRAFT_0244 0.68 -5.3 252,885 - B158DRAFT_0244 0.75 -4.6 252,887 + B158DRAFT_0244 0.75 -3.3 252,887 + B158DRAFT_0244 0.75 -2.4 252,897 + B158DRAFT_0244 0.76 -2.6 252,963 - B158DRAFT_0244 0.84 -5.0 253,188 + -2.1 253,224 + B158DRAFT_0245 0.15 -3.2 253,224 + B158DRAFT_0245 0.15 -0.8 253,418 - B158DRAFT_0245 0.43 -0.1 253,418 - B158DRAFT_0245 0.43 -1.2 253,495 + B158DRAFT_0245 0.55 -3.9 253,538 + B158DRAFT_0245 0.61 -2.9 253,538 + B158DRAFT_0245 0.61 -3.8 253,572 - B158DRAFT_0245 0.66 +1.1 253,673 - B158DRAFT_0245 0.81 -2.1 253,692 - B158DRAFT_0245 0.84 -1.2 253,692 - B158DRAFT_0245 0.84 +0.6
Or see this region's nucleotide sequence