Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0098

Experiment: m.b. methylglyoxal 0.005 vol%

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0096 and B158DRAFT_0097 are separated by 53 nucleotidesB158DRAFT_0097 and B158DRAFT_0098 are separated by 8 nucleotidesB158DRAFT_0098 and B158DRAFT_0099 are separated by 51 nucleotides B158DRAFT_0096: B158DRAFT_0096 - Putative Mg2+ and Co2+ transporter CorC, at 89,952 to 90,809 _0096 B158DRAFT_0097: B158DRAFT_0097 - metalloprotein, YbeY/UPF0054 family, at 90,863 to 91,369 _0097 B158DRAFT_0098: B158DRAFT_0098 - Phosphate starvation-inducible protein PhoH, predicted ATPase, at 91,378 to 92,418 _0098 B158DRAFT_0099: B158DRAFT_0099 - tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB, at 92,470 to 93,810 _0099 Position (kb) 91 92 93Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 90.438 kb on - strand, within B158DRAFT_0096at 90.687 kb on - strand, within B158DRAFT_0096at 90.706 kb on + strand, within B158DRAFT_0096at 90.884 kb on - strandat 91.420 kb on - strandat 91.435 kb on - strandat 91.435 kb on - strandat 91.435 kb on - strandat 91.435 kb on - strandat 91.435 kb on - strandat 91.435 kb on - strandat 91.581 kb on - strand, within B158DRAFT_0098at 91.581 kb on - strand, within B158DRAFT_0098at 91.588 kb on - strand, within B158DRAFT_0098at 91.619 kb on - strand, within B158DRAFT_0098at 91.685 kb on - strand, within B158DRAFT_0098at 91.685 kb on - strand, within B158DRAFT_0098at 91.690 kb on - strand, within B158DRAFT_0098at 91.698 kb on - strand, within B158DRAFT_0098at 91.891 kb on - strand, within B158DRAFT_0098at 92.259 kb on - strand, within B158DRAFT_0098at 92.332 kb on - strandat 92.332 kb on - strandat 92.340 kb on - strandat 92.376 kb on - strandat 92.417 kb on - strandat 92.427 kb on - strandat 92.434 kb on - strandat 92.546 kb on - strandat 92.666 kb on - strand, within B158DRAFT_0099at 92.666 kb on - strand, within B158DRAFT_0099at 92.666 kb on - strand, within B158DRAFT_0099at 92.671 kb on - strand, within B158DRAFT_0099at 92.671 kb on - strand, within B158DRAFT_0099at 92.671 kb on - strand, within B158DRAFT_0099at 92.795 kb on - strand, within B158DRAFT_0099at 92.795 kb on - strand, within B158DRAFT_0099at 92.807 kb on - strand, within B158DRAFT_0099at 92.983 kb on - strand, within B158DRAFT_0099at 92.983 kb on - strand, within B158DRAFT_0099at 92.983 kb on - strand, within B158DRAFT_0099at 93.015 kb on - strand, within B158DRAFT_0099at 93.015 kb on - strand, within B158DRAFT_0099at 93.030 kb on - strand, within B158DRAFT_0099at 93.071 kb on - strand, within B158DRAFT_0099at 93.174 kb on - strand, within B158DRAFT_0099at 93.174 kb on - strand, within B158DRAFT_0099at 93.198 kb on - strand, within B158DRAFT_0099at 93.299 kb on - strand, within B158DRAFT_0099at 93.312 kb on - strand, within B158DRAFT_0099at 93.315 kb on - strand, within B158DRAFT_0099

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.005 vol%
remove
90,438 - B158DRAFT_0096 0.57 -1.7
90,687 - B158DRAFT_0096 0.86 -2.6
90,706 + B158DRAFT_0096 0.88 -1.1
90,884 - +0.2
91,420 - +1.1
91,435 - +0.4
91,435 - +0.5
91,435 - +0.2
91,435 - -0.6
91,435 - +0.6
91,435 - -0.2
91,581 - B158DRAFT_0098 0.20 +0.2
91,581 - B158DRAFT_0098 0.20 -0.4
91,588 - B158DRAFT_0098 0.20 -3.2
91,619 - B158DRAFT_0098 0.23 +0.7
91,685 - B158DRAFT_0098 0.29 -0.0
91,685 - B158DRAFT_0098 0.29 -5.2
91,690 - B158DRAFT_0098 0.30 -0.6
91,698 - B158DRAFT_0098 0.31 -0.2
91,891 - B158DRAFT_0098 0.49 -1.1
92,259 - B158DRAFT_0098 0.85 -1.1
92,332 - -0.3
92,332 - +0.7
92,340 - -0.8
92,376 - -2.4
92,417 - -0.4
92,427 - +0.4
92,434 - +0.7
92,546 - +0.3
92,666 - B158DRAFT_0099 0.15 -3.3
92,666 - B158DRAFT_0099 0.15 +0.1
92,666 - B158DRAFT_0099 0.15 -0.3
92,671 - B158DRAFT_0099 0.15 -0.7
92,671 - B158DRAFT_0099 0.15 +0.7
92,671 - B158DRAFT_0099 0.15 -0.4
92,795 - B158DRAFT_0099 0.24 -1.8
92,795 - B158DRAFT_0099 0.24 +0.4
92,807 - B158DRAFT_0099 0.25 +0.5
92,983 - B158DRAFT_0099 0.38 +1.5
92,983 - B158DRAFT_0099 0.38 +0.3
92,983 - B158DRAFT_0099 0.38 -1.1
93,015 - B158DRAFT_0099 0.41 +0.8
93,015 - B158DRAFT_0099 0.41 +0.9
93,030 - B158DRAFT_0099 0.42 -0.4
93,071 - B158DRAFT_0099 0.45 +0.2
93,174 - B158DRAFT_0099 0.52 +1.1
93,174 - B158DRAFT_0099 0.52 +0.3
93,198 - B158DRAFT_0099 0.54 -2.6
93,299 - B158DRAFT_0099 0.62 -0.6
93,312 - B158DRAFT_0099 0.63 -0.1
93,315 - B158DRAFT_0099 0.63 -1.8

Or see this region's nucleotide sequence