Experiment: m.b. Gentamicin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2001 and B158DRAFT_2002 are separated by 137 nucleotides B158DRAFT_2002 and B158DRAFT_2003 are separated by 14 nucleotides B158DRAFT_2003 and B158DRAFT_2004 are separated by 25 nucleotides B158DRAFT_2004 and B158DRAFT_2005 are separated by 140 nucleotides B158DRAFT_2005 and B158DRAFT_2006 are separated by 23 nucleotides
B158DRAFT_2001: B158DRAFT_2001 - hypothetical protein, at 136,269 to 136,850
_2001
B158DRAFT_2002: B158DRAFT_2002 - ribosomal protein S6, at 136,988 to 137,386
_2002
B158DRAFT_2003: B158DRAFT_2003 - ribosomal protein S18, at 137,401 to 137,628
_2003
B158DRAFT_2004: B158DRAFT_2004 - LSU ribosomal protein L9P, at 137,654 to 138,109
_2004
B158DRAFT_2005: B158DRAFT_2005 - hypothetical protein, at 138,250 to 139,080
_2005
B158DRAFT_2006: B158DRAFT_2006 - Uncharacterized conserved protein, at 139,104 to 139,502
_2006
Position (kb) 137
138
139 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 136.662 kb on + strand, within B158DRAFT_2001 at 136.705 kb on - strand, within B158DRAFT_2001 at 136.705 kb on - strand, within B158DRAFT_2001 at 136.728 kb on - strand, within B158DRAFT_2001 at 136.838 kb on - strand at 136.840 kb on + strand at 137.729 kb on + strand, within B158DRAFT_2004 at 137.760 kb on - strand, within B158DRAFT_2004 at 137.800 kb on + strand, within B158DRAFT_2004 at 137.846 kb on + strand, within B158DRAFT_2004 at 137.846 kb on + strand, within B158DRAFT_2004 at 137.846 kb on + strand, within B158DRAFT_2004 at 137.854 kb on - strand, within B158DRAFT_2004 at 137.854 kb on - strand, within B158DRAFT_2004 at 137.864 kb on - strand, within B158DRAFT_2004 at 137.896 kb on - strand, within B158DRAFT_2004 at 137.934 kb on + strand, within B158DRAFT_2004 at 137.971 kb on - strand, within B158DRAFT_2004 at 138.112 kb on - strand at 138.120 kb on - strand at 138.215 kb on + strand at 138.345 kb on - strand, within B158DRAFT_2005 at 138.381 kb on + strand, within B158DRAFT_2005 at 138.422 kb on + strand, within B158DRAFT_2005 at 138.441 kb on + strand, within B158DRAFT_2005 at 138.529 kb on - strand, within B158DRAFT_2005 at 138.536 kb on - strand, within B158DRAFT_2005 at 138.579 kb on + strand, within B158DRAFT_2005 at 138.579 kb on + strand, within B158DRAFT_2005 at 138.579 kb on + strand, within B158DRAFT_2005 at 138.579 kb on + strand, within B158DRAFT_2005 at 138.579 kb on + strand, within B158DRAFT_2005 at 138.587 kb on - strand, within B158DRAFT_2005 at 138.587 kb on - strand, within B158DRAFT_2005 at 138.587 kb on - strand, within B158DRAFT_2005 at 138.597 kb on - strand, within B158DRAFT_2005 at 138.615 kb on - strand, within B158DRAFT_2005 at 138.629 kb on + strand, within B158DRAFT_2005 at 138.629 kb on + strand, within B158DRAFT_2005 at 138.637 kb on - strand, within B158DRAFT_2005 at 138.724 kb on + strand, within B158DRAFT_2005 at 138.724 kb on + strand, within B158DRAFT_2005 at 138.807 kb on + strand, within B158DRAFT_2005 at 138.807 kb on + strand, within B158DRAFT_2005 at 138.815 kb on - strand, within B158DRAFT_2005 at 138.815 kb on - strand, within B158DRAFT_2005 at 138.826 kb on + strand, within B158DRAFT_2005 at 138.838 kb on + strand, within B158DRAFT_2005 at 138.953 kb on + strand, within B158DRAFT_2005 at 138.953 kb on + strand, within B158DRAFT_2005 at 138.958 kb on + strand, within B158DRAFT_2005 at 138.958 kb on - strand, within B158DRAFT_2005 at 138.961 kb on - strand, within B158DRAFT_2005 at 138.961 kb on - strand, within B158DRAFT_2005 at 138.961 kb on - strand, within B158DRAFT_2005 at 138.978 kb on + strand, within B158DRAFT_2005 at 138.986 kb on - strand, within B158DRAFT_2005 at 138.986 kb on - strand, within B158DRAFT_2005 at 139.040 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Gentamicin 0.1 mg/ml remove 136,662 + B158DRAFT_2001 0.68 +0.7 136,705 - B158DRAFT_2001 0.75 -0.4 136,705 - B158DRAFT_2001 0.75 +0.1 136,728 - B158DRAFT_2001 0.79 +0.1 136,838 - -0.6 136,840 + -0.1 137,729 + B158DRAFT_2004 0.16 -0.5 137,760 - B158DRAFT_2004 0.23 +0.2 137,800 + B158DRAFT_2004 0.32 -1.3 137,846 + B158DRAFT_2004 0.42 -1.0 137,846 + B158DRAFT_2004 0.42 -2.1 137,846 + B158DRAFT_2004 0.42 +0.4 137,854 - B158DRAFT_2004 0.44 +0.1 137,854 - B158DRAFT_2004 0.44 -1.5 137,864 - B158DRAFT_2004 0.46 -4.0 137,896 - B158DRAFT_2004 0.53 -0.5 137,934 + B158DRAFT_2004 0.61 -0.6 137,971 - B158DRAFT_2004 0.70 +0.3 138,112 - -0.7 138,120 - -0.4 138,215 + -0.5 138,345 - B158DRAFT_2005 0.11 -0.2 138,381 + B158DRAFT_2005 0.16 +0.6 138,422 + B158DRAFT_2005 0.21 +1.7 138,441 + B158DRAFT_2005 0.23 +0.1 138,529 - B158DRAFT_2005 0.34 -0.6 138,536 - B158DRAFT_2005 0.34 -0.4 138,579 + B158DRAFT_2005 0.40 +1.3 138,579 + B158DRAFT_2005 0.40 +0.1 138,579 + B158DRAFT_2005 0.40 -1.7 138,579 + B158DRAFT_2005 0.40 +0.5 138,579 + B158DRAFT_2005 0.40 +2.0 138,587 - B158DRAFT_2005 0.41 -0.9 138,587 - B158DRAFT_2005 0.41 +0.1 138,587 - B158DRAFT_2005 0.41 -0.6 138,597 - B158DRAFT_2005 0.42 +0.7 138,615 - B158DRAFT_2005 0.44 +0.3 138,629 + B158DRAFT_2005 0.46 +0.9 138,629 + B158DRAFT_2005 0.46 +0.7 138,637 - B158DRAFT_2005 0.47 -0.9 138,724 + B158DRAFT_2005 0.57 +0.2 138,724 + B158DRAFT_2005 0.57 +1.1 138,807 + B158DRAFT_2005 0.67 -0.4 138,807 + B158DRAFT_2005 0.67 -0.0 138,815 - B158DRAFT_2005 0.68 +2.1 138,815 - B158DRAFT_2005 0.68 -2.2 138,826 + B158DRAFT_2005 0.69 -1.7 138,838 + B158DRAFT_2005 0.71 +0.4 138,953 + B158DRAFT_2005 0.85 -1.6 138,953 + B158DRAFT_2005 0.85 -1.8 138,958 + B158DRAFT_2005 0.85 -1.7 138,958 - B158DRAFT_2005 0.85 -3.4 138,961 - B158DRAFT_2005 0.86 +0.6 138,961 - B158DRAFT_2005 0.86 -0.9 138,961 - B158DRAFT_2005 0.86 +0.7 138,978 + B158DRAFT_2005 0.88 +0.3 138,986 - B158DRAFT_2005 0.89 -0.4 138,986 - B158DRAFT_2005 0.89 -1.5 139,040 + -0.2
Or see this region's nucleotide sequence