Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1610

Experiment: m.b. Gentamicin 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1609 and B158DRAFT_1610 are separated by 20 nucleotidesB158DRAFT_1610 and B158DRAFT_1611 are separated by 29 nucleotidesB158DRAFT_1611 and B158DRAFT_1612 are separated by 106 nucleotidesB158DRAFT_1612 and B158DRAFT_1613 are separated by 91 nucleotides B158DRAFT_1609: B158DRAFT_1609 - putative thymidine phosphorylase, at 1,670,376 to 1,671,890 _1609 B158DRAFT_1610: B158DRAFT_1610 - Metal-dependent hydrolase, at 1,671,911 to 1,672,657 _1610 B158DRAFT_1611: B158DRAFT_1611 - hypothetical protein, at 1,672,687 to 1,672,977 _1611 B158DRAFT_1612: B158DRAFT_1612 - hypothetical protein, at 1,673,084 to 1,673,251 _1612 B158DRAFT_1613: B158DRAFT_1613 - arsenical-resistance protein, at 1,673,343 to 1,674,362 _1613 Position (kb) 1671 1672 1673Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1670.955 kb on - strand, within B158DRAFT_1609at 1670.960 kb on + strand, within B158DRAFT_1609at 1670.962 kb on + strand, within B158DRAFT_1609at 1670.975 kb on - strand, within B158DRAFT_1609at 1670.975 kb on - strand, within B158DRAFT_1609at 1670.977 kb on + strand, within B158DRAFT_1609at 1670.977 kb on - strand, within B158DRAFT_1609at 1670.986 kb on + strand, within B158DRAFT_1609at 1671.071 kb on - strand, within B158DRAFT_1609at 1671.117 kb on + strand, within B158DRAFT_1609at 1671.117 kb on + strand, within B158DRAFT_1609at 1671.117 kb on + strand, within B158DRAFT_1609at 1671.117 kb on + strand, within B158DRAFT_1609at 1671.117 kb on + strand, within B158DRAFT_1609at 1671.125 kb on - strand, within B158DRAFT_1609at 1671.125 kb on - strand, within B158DRAFT_1609at 1671.143 kb on + strand, within B158DRAFT_1609at 1671.310 kb on - strand, within B158DRAFT_1609at 1671.369 kb on - strand, within B158DRAFT_1609at 1671.494 kb on + strand, within B158DRAFT_1609at 1671.495 kb on + strand, within B158DRAFT_1609at 1671.495 kb on + strand, within B158DRAFT_1609at 1671.502 kb on - strand, within B158DRAFT_1609at 1671.503 kb on - strand, within B158DRAFT_1609at 1671.503 kb on - strand, within B158DRAFT_1609at 1671.613 kb on + strand, within B158DRAFT_1609at 1671.695 kb on + strand, within B158DRAFT_1609at 1671.761 kb on + strandat 1671.994 kb on - strand, within B158DRAFT_1610at 1672.058 kb on + strand, within B158DRAFT_1610at 1672.058 kb on - strand, within B158DRAFT_1610at 1672.101 kb on + strand, within B158DRAFT_1610at 1672.109 kb on - strand, within B158DRAFT_1610at 1672.111 kb on - strand, within B158DRAFT_1610at 1672.124 kb on - strand, within B158DRAFT_1610at 1672.124 kb on - strand, within B158DRAFT_1610at 1672.312 kb on - strand, within B158DRAFT_1610at 1672.331 kb on - strand, within B158DRAFT_1610at 1672.426 kb on - strand, within B158DRAFT_1610at 1672.453 kb on + strand, within B158DRAFT_1610at 1672.498 kb on + strand, within B158DRAFT_1610at 1672.545 kb on + strand, within B158DRAFT_1610at 1672.553 kb on - strand, within B158DRAFT_1610at 1672.558 kb on + strand, within B158DRAFT_1610at 1672.601 kb on - strandat 1672.620 kb on - strandat 1672.630 kb on + strandat 1672.653 kb on - strandat 1672.666 kb on + strandat 1672.706 kb on - strandat 1672.727 kb on - strand, within B158DRAFT_1611at 1672.814 kb on + strand, within B158DRAFT_1611at 1672.814 kb on + strand, within B158DRAFT_1611at 1672.820 kb on + strand, within B158DRAFT_1611at 1672.826 kb on + strand, within B158DRAFT_1611at 1672.827 kb on + strand, within B158DRAFT_1611at 1672.922 kb on + strand, within B158DRAFT_1611at 1672.922 kb on + strand, within B158DRAFT_1611at 1672.922 kb on + strand, within B158DRAFT_1611at 1672.922 kb on + strand, within B158DRAFT_1611at 1672.922 kb on + strand, within B158DRAFT_1611at 1672.930 kb on - strand, within B158DRAFT_1611at 1672.930 kb on - strand, within B158DRAFT_1611at 1672.930 kb on - strand, within B158DRAFT_1611at 1672.930 kb on - strand, within B158DRAFT_1611at 1672.930 kb on - strand, within B158DRAFT_1611at 1672.988 kb on + strandat 1672.988 kb on + strandat 1672.988 kb on + strandat 1672.996 kb on - strandat 1673.002 kb on + strandat 1673.002 kb on + strandat 1673.002 kb on + strandat 1673.002 kb on + strandat 1673.002 kb on + strandat 1673.010 kb on + strandat 1673.010 kb on - strandat 1673.010 kb on - strandat 1673.010 kb on - strandat 1673.010 kb on - strandat 1673.010 kb on - strandat 1673.010 kb on - strandat 1673.010 kb on - strandat 1673.010 kb on - strandat 1673.018 kb on - strandat 1673.018 kb on - strandat 1673.118 kb on + strand, within B158DRAFT_1612at 1673.187 kb on + strand, within B158DRAFT_1612at 1673.187 kb on + strand, within B158DRAFT_1612at 1673.289 kb on + strandat 1673.289 kb on + strandat 1673.294 kb on + strandat 1673.294 kb on + strandat 1673.313 kb on - strandat 1673.348 kb on + strandat 1673.404 kb on + strandat 1673.443 kb on + strandat 1673.443 kb on + strandat 1673.443 kb on + strandat 1673.443 kb on + strandat 1673.443 kb on + strandat 1673.443 kb on + strandat 1673.443 kb on + strandat 1673.451 kb on - strand, within B158DRAFT_1613at 1673.451 kb on - strand, within B158DRAFT_1613at 1673.451 kb on - strand, within B158DRAFT_1613at 1673.451 kb on - strand, within B158DRAFT_1613at 1673.451 kb on - strand, within B158DRAFT_1613at 1673.460 kb on - strand, within B158DRAFT_1613at 1673.570 kb on - strand, within B158DRAFT_1613

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Gentamicin 0.1 mg/ml
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1,670,955 - B158DRAFT_1609 0.38 +0.1
1,670,960 + B158DRAFT_1609 0.39 -0.9
1,670,962 + B158DRAFT_1609 0.39 +0.6
1,670,975 - B158DRAFT_1609 0.40 -0.9
1,670,975 - B158DRAFT_1609 0.40 -0.1
1,670,977 + B158DRAFT_1609 0.40 +0.2
1,670,977 - B158DRAFT_1609 0.40 -1.7
1,670,986 + B158DRAFT_1609 0.40 -0.1
1,671,071 - B158DRAFT_1609 0.46 +0.3
1,671,117 + B158DRAFT_1609 0.49 +2.4
1,671,117 + B158DRAFT_1609 0.49 +0.4
1,671,117 + B158DRAFT_1609 0.49 +0.8
1,671,117 + B158DRAFT_1609 0.49 -1.1
1,671,117 + B158DRAFT_1609 0.49 +0.3
1,671,125 - B158DRAFT_1609 0.49 -0.4
1,671,125 - B158DRAFT_1609 0.49 -0.5
1,671,143 + B158DRAFT_1609 0.51 -0.1
1,671,310 - B158DRAFT_1609 0.62 -2.2
1,671,369 - B158DRAFT_1609 0.66 -1.2
1,671,494 + B158DRAFT_1609 0.74 +0.7
1,671,495 + B158DRAFT_1609 0.74 -0.6
1,671,495 + B158DRAFT_1609 0.74 -0.1
1,671,502 - B158DRAFT_1609 0.74 -1.0
1,671,503 - B158DRAFT_1609 0.74 -0.5
1,671,503 - B158DRAFT_1609 0.74 -1.4
1,671,613 + B158DRAFT_1609 0.82 -0.4
1,671,695 + B158DRAFT_1609 0.87 +0.3
1,671,761 + -0.9
1,671,994 - B158DRAFT_1610 0.11 +0.2
1,672,058 + B158DRAFT_1610 0.20 -0.6
1,672,058 - B158DRAFT_1610 0.20 +0.2
1,672,101 + B158DRAFT_1610 0.25 +0.7
1,672,109 - B158DRAFT_1610 0.27 -0.1
1,672,111 - B158DRAFT_1610 0.27 -0.4
1,672,124 - B158DRAFT_1610 0.29 -0.0
1,672,124 - B158DRAFT_1610 0.29 -0.3
1,672,312 - B158DRAFT_1610 0.54 -0.7
1,672,331 - B158DRAFT_1610 0.56 -0.3
1,672,426 - B158DRAFT_1610 0.69 +0.5
1,672,453 + B158DRAFT_1610 0.73 -0.6
1,672,498 + B158DRAFT_1610 0.79 -0.3
1,672,545 + B158DRAFT_1610 0.85 +0.4
1,672,553 - B158DRAFT_1610 0.86 -0.9
1,672,558 + B158DRAFT_1610 0.87 +0.8
1,672,601 - +0.1
1,672,620 - -0.7
1,672,630 + -3.1
1,672,653 - +0.5
1,672,666 + +0.2
1,672,706 - +0.3
1,672,727 - B158DRAFT_1611 0.14 -0.4
1,672,814 + B158DRAFT_1611 0.44 -0.6
1,672,814 + B158DRAFT_1611 0.44 +0.6
1,672,820 + B158DRAFT_1611 0.46 +0.9
1,672,826 + B158DRAFT_1611 0.48 -1.0
1,672,827 + B158DRAFT_1611 0.48 +1.1
1,672,922 + B158DRAFT_1611 0.81 -0.8
1,672,922 + B158DRAFT_1611 0.81 -0.6
1,672,922 + B158DRAFT_1611 0.81 -3.1
1,672,922 + B158DRAFT_1611 0.81 -0.4
1,672,922 + B158DRAFT_1611 0.81 +0.0
1,672,930 - B158DRAFT_1611 0.84 -2.0
1,672,930 - B158DRAFT_1611 0.84 -0.0
1,672,930 - B158DRAFT_1611 0.84 +0.4
1,672,930 - B158DRAFT_1611 0.84 +0.3
1,672,930 - B158DRAFT_1611 0.84 +1.3
1,672,988 + -0.4
1,672,988 + +0.2
1,672,988 + +0.9
1,672,996 - -1.0
1,673,002 + -1.4
1,673,002 + +0.5
1,673,002 + +0.9
1,673,002 + +0.5
1,673,002 + -0.3
1,673,010 + -4.0
1,673,010 - -0.0
1,673,010 - -0.0
1,673,010 - +0.1
1,673,010 - -0.2
1,673,010 - +0.9
1,673,010 - +0.2
1,673,010 - -1.1
1,673,010 - +0.5
1,673,018 - +0.1
1,673,018 - -0.2
1,673,118 + B158DRAFT_1612 0.20 -1.9
1,673,187 + B158DRAFT_1612 0.61 -1.3
1,673,187 + B158DRAFT_1612 0.61 -0.2
1,673,289 + -0.2
1,673,289 + -0.4
1,673,294 + +0.6
1,673,294 + +0.2
1,673,313 - -0.2
1,673,348 + -0.4
1,673,404 + +0.4
1,673,443 + -0.2
1,673,443 + +0.7
1,673,443 + -1.0
1,673,443 + +0.2
1,673,443 + -0.3
1,673,443 + -0.1
1,673,443 + +0.1
1,673,451 - B158DRAFT_1613 0.11 -0.2
1,673,451 - B158DRAFT_1613 0.11 +0.2
1,673,451 - B158DRAFT_1613 0.11 -0.6
1,673,451 - B158DRAFT_1613 0.11 -0.1
1,673,451 - B158DRAFT_1613 0.11 +0.5
1,673,460 - B158DRAFT_1613 0.11 -0.5
1,673,570 - B158DRAFT_1613 0.22 -3.5

Or see this region's nucleotide sequence