Experiment: m.b. Gentamicin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0836 and B158DRAFT_0837 overlap by 1 nucleotides B158DRAFT_0837 and B158DRAFT_0838 overlap by 11 nucleotides
B158DRAFT_0836: B158DRAFT_0836 - Type II secretory pathway, component ExeA (predicted ATPase), at 846,046 to 847,779
_0836
B158DRAFT_0837: B158DRAFT_0837 - hypothetical protein, at 847,779 to 848,597
_0837
B158DRAFT_0838: B158DRAFT_0838 - Predicted Zn-dependent peptidases, at 848,587 to 851,451
_0838
Position (kb) 847
848
849 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 846.782 kb on - strand, within B158DRAFT_0836 at 846.811 kb on - strand, within B158DRAFT_0836 at 846.811 kb on - strand, within B158DRAFT_0836 at 846.822 kb on + strand, within B158DRAFT_0836 at 846.912 kb on - strand, within B158DRAFT_0836 at 846.929 kb on + strand, within B158DRAFT_0836 at 846.937 kb on - strand, within B158DRAFT_0836 at 847.005 kb on - strand, within B158DRAFT_0836 at 847.026 kb on + strand, within B158DRAFT_0836 at 847.026 kb on + strand, within B158DRAFT_0836 at 847.026 kb on + strand, within B158DRAFT_0836 at 847.034 kb on - strand, within B158DRAFT_0836 at 847.055 kb on + strand, within B158DRAFT_0836 at 847.062 kb on + strand, within B158DRAFT_0836 at 847.179 kb on - strand, within B158DRAFT_0836 at 847.302 kb on + strand, within B158DRAFT_0836 at 847.388 kb on - strand, within B158DRAFT_0836 at 847.388 kb on - strand, within B158DRAFT_0836 at 847.388 kb on - strand, within B158DRAFT_0836 at 847.388 kb on - strand, within B158DRAFT_0836 at 847.483 kb on + strand, within B158DRAFT_0836 at 847.491 kb on - strand, within B158DRAFT_0836 at 847.491 kb on - strand, within B158DRAFT_0836 at 847.865 kb on - strand, within B158DRAFT_0837 at 848.000 kb on - strand, within B158DRAFT_0837 at 848.084 kb on + strand, within B158DRAFT_0837 at 848.220 kb on - strand, within B158DRAFT_0837 at 848.318 kb on - strand, within B158DRAFT_0837 at 848.330 kb on - strand, within B158DRAFT_0837 at 848.404 kb on + strand, within B158DRAFT_0837 at 848.411 kb on - strand, within B158DRAFT_0837 at 848.416 kb on - strand, within B158DRAFT_0837 at 848.479 kb on + strand, within B158DRAFT_0837 at 848.479 kb on + strand, within B158DRAFT_0837 at 848.487 kb on - strand, within B158DRAFT_0837 at 848.568 kb on + strand at 848.574 kb on + strand at 848.804 kb on + strand at 848.804 kb on + strand at 848.804 kb on + strand at 848.829 kb on - strand at 848.855 kb on + strand at 848.864 kb on - strand at 849.093 kb on + strand, within B158DRAFT_0838 at 849.101 kb on - strand, within B158DRAFT_0838 at 849.101 kb on - strand, within B158DRAFT_0838 at 849.101 kb on - strand, within B158DRAFT_0838 at 849.155 kb on + strand, within B158DRAFT_0838 at 849.220 kb on - strand, within B158DRAFT_0838 at 849.400 kb on + strand, within B158DRAFT_0838 at 849.418 kb on - strand, within B158DRAFT_0838 at 849.464 kb on + strand, within B158DRAFT_0838 at 849.464 kb on + strand, within B158DRAFT_0838 at 849.469 kb on + strand, within B158DRAFT_0838 at 849.469 kb on + strand, within B158DRAFT_0838 at 849.469 kb on + strand, within B158DRAFT_0838 at 849.474 kb on + strand, within B158DRAFT_0838 at 849.507 kb on + strand, within B158DRAFT_0838
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Gentamicin 0.1 mg/ml remove 846,782 - B158DRAFT_0836 0.42 -0.4 846,811 - B158DRAFT_0836 0.44 -2.3 846,811 - B158DRAFT_0836 0.44 -0.2 846,822 + B158DRAFT_0836 0.45 +0.5 846,912 - B158DRAFT_0836 0.50 +0.1 846,929 + B158DRAFT_0836 0.51 +0.9 846,937 - B158DRAFT_0836 0.51 +1.5 847,005 - B158DRAFT_0836 0.55 +1.0 847,026 + B158DRAFT_0836 0.57 -0.1 847,026 + B158DRAFT_0836 0.57 +0.3 847,026 + B158DRAFT_0836 0.57 -0.3 847,034 - B158DRAFT_0836 0.57 +0.3 847,055 + B158DRAFT_0836 0.58 -0.0 847,062 + B158DRAFT_0836 0.59 -0.0 847,179 - B158DRAFT_0836 0.65 -0.2 847,302 + B158DRAFT_0836 0.72 +0.5 847,388 - B158DRAFT_0836 0.77 +0.0 847,388 - B158DRAFT_0836 0.77 +0.4 847,388 - B158DRAFT_0836 0.77 +0.0 847,388 - B158DRAFT_0836 0.77 +0.3 847,483 + B158DRAFT_0836 0.83 -0.0 847,491 - B158DRAFT_0836 0.83 +0.6 847,491 - B158DRAFT_0836 0.83 -0.9 847,865 - B158DRAFT_0837 0.11 +0.1 848,000 - B158DRAFT_0837 0.27 +0.1 848,084 + B158DRAFT_0837 0.37 +0.2 848,220 - B158DRAFT_0837 0.54 +0.0 848,318 - B158DRAFT_0837 0.66 -0.7 848,330 - B158DRAFT_0837 0.67 -1.4 848,404 + B158DRAFT_0837 0.76 -0.2 848,411 - B158DRAFT_0837 0.77 -0.7 848,416 - B158DRAFT_0837 0.78 -0.0 848,479 + B158DRAFT_0837 0.85 -0.7 848,479 + B158DRAFT_0837 0.85 -0.5 848,487 - B158DRAFT_0837 0.86 +0.3 848,568 + -0.1 848,574 + -0.5 848,804 + -0.7 848,804 + -0.7 848,804 + -3.1 848,829 - -4.1 848,855 + -0.6 848,864 - -0.2 849,093 + B158DRAFT_0838 0.18 -0.7 849,101 - B158DRAFT_0838 0.18 +0.4 849,101 - B158DRAFT_0838 0.18 +0.2 849,101 - B158DRAFT_0838 0.18 -0.6 849,155 + B158DRAFT_0838 0.20 -0.1 849,220 - B158DRAFT_0838 0.22 -1.5 849,400 + B158DRAFT_0838 0.28 -0.2 849,418 - B158DRAFT_0838 0.29 +0.4 849,464 + B158DRAFT_0838 0.31 +0.1 849,464 + B158DRAFT_0838 0.31 +0.2 849,469 + B158DRAFT_0838 0.31 +0.9 849,469 + B158DRAFT_0838 0.31 -0.1 849,469 + B158DRAFT_0838 0.31 +0.0 849,474 + B158DRAFT_0838 0.31 -1.9 849,507 + B158DRAFT_0838 0.32 +0.6
Or see this region's nucleotide sequence