Experiment: m.b. Gentamicin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0725 and B158DRAFT_0726 are separated by 195 nucleotides B158DRAFT_0726 and B158DRAFT_0727 are separated by 6 nucleotides B158DRAFT_0727 and B158DRAFT_0728 overlap by 4 nucleotides
B158DRAFT_0725: B158DRAFT_0725 - GTP-binding protein TypA/BipA, at 727,639 to 729,462
_0725
B158DRAFT_0726: B158DRAFT_0726 - hypothetical protein, at 729,658 to 730,026
_0726
B158DRAFT_0727: B158DRAFT_0727 - D-tyrosyl-tRNA(Tyr) deacylase, at 730,033 to 730,470
_0727
B158DRAFT_0728: B158DRAFT_0728 - Activator of Hsp90 ATPase homolog 1-like protein., at 730,467 to 731,027
_0728
Position (kb) 729
730
731 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 728.675 kb on + strand, within B158DRAFT_0725 at 728.698 kb on + strand, within B158DRAFT_0725 at 728.703 kb on + strand, within B158DRAFT_0725 at 728.733 kb on - strand, within B158DRAFT_0725 at 728.767 kb on + strand, within B158DRAFT_0725 at 728.824 kb on - strand, within B158DRAFT_0725 at 728.843 kb on - strand, within B158DRAFT_0725 at 728.857 kb on - strand, within B158DRAFT_0725 at 728.869 kb on + strand, within B158DRAFT_0725 at 728.869 kb on + strand, within B158DRAFT_0725 at 728.877 kb on - strand, within B158DRAFT_0725 at 728.887 kb on - strand, within B158DRAFT_0725 at 728.887 kb on - strand, within B158DRAFT_0725 at 728.909 kb on - strand, within B158DRAFT_0725 at 728.911 kb on + strand, within B158DRAFT_0725 at 728.943 kb on - strand, within B158DRAFT_0725 at 728.972 kb on + strand, within B158DRAFT_0725 at 728.972 kb on + strand, within B158DRAFT_0725 at 728.980 kb on - strand, within B158DRAFT_0725 at 729.041 kb on + strand, within B158DRAFT_0725 at 729.049 kb on - strand, within B158DRAFT_0725 at 729.049 kb on - strand, within B158DRAFT_0725 at 729.060 kb on + strand, within B158DRAFT_0725 at 729.068 kb on - strand, within B158DRAFT_0725 at 729.068 kb on - strand, within B158DRAFT_0725 at 729.124 kb on + strand, within B158DRAFT_0725 at 729.129 kb on + strand, within B158DRAFT_0725 at 729.190 kb on + strand, within B158DRAFT_0725 at 729.290 kb on - strand at 729.311 kb on - strand at 729.311 kb on - strand at 729.369 kb on + strand at 729.369 kb on + strand at 729.377 kb on - strand at 729.389 kb on + strand at 729.745 kb on + strand, within B158DRAFT_0726 at 729.802 kb on - strand, within B158DRAFT_0726 at 729.804 kb on + strand, within B158DRAFT_0726 at 729.834 kb on + strand, within B158DRAFT_0726 at 729.834 kb on + strand, within B158DRAFT_0726 at 729.849 kb on + strand, within B158DRAFT_0726 at 730.117 kb on - strand, within B158DRAFT_0727 at 730.363 kb on + strand, within B158DRAFT_0727 at 730.368 kb on + strand, within B158DRAFT_0727 at 730.368 kb on + strand, within B158DRAFT_0727 at 730.368 kb on + strand, within B158DRAFT_0727 at 730.404 kb on + strand, within B158DRAFT_0727 at 730.559 kb on + strand, within B158DRAFT_0728 at 730.559 kb on + strand, within B158DRAFT_0728 at 730.567 kb on - strand, within B158DRAFT_0728 at 730.596 kb on + strand, within B158DRAFT_0728 at 730.598 kb on + strand, within B158DRAFT_0728 at 730.598 kb on + strand, within B158DRAFT_0728 at 730.606 kb on - strand, within B158DRAFT_0728 at 730.684 kb on + strand, within B158DRAFT_0728 at 730.714 kb on - strand, within B158DRAFT_0728
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Gentamicin 0.1 mg/ml remove 728,675 + B158DRAFT_0725 0.57 +0.8 728,698 + B158DRAFT_0725 0.58 -1.9 728,703 + B158DRAFT_0725 0.58 +0.7 728,733 - B158DRAFT_0725 0.60 -0.4 728,767 + B158DRAFT_0725 0.62 -0.3 728,824 - B158DRAFT_0725 0.65 -1.4 728,843 - B158DRAFT_0725 0.66 -1.0 728,857 - B158DRAFT_0725 0.67 +0.5 728,869 + B158DRAFT_0725 0.67 -0.3 728,869 + B158DRAFT_0725 0.67 -0.1 728,877 - B158DRAFT_0725 0.68 -0.1 728,887 - B158DRAFT_0725 0.68 -0.8 728,887 - B158DRAFT_0725 0.68 -0.7 728,909 - B158DRAFT_0725 0.70 -3.4 728,911 + B158DRAFT_0725 0.70 -0.9 728,943 - B158DRAFT_0725 0.71 +0.3 728,972 + B158DRAFT_0725 0.73 +0.4 728,972 + B158DRAFT_0725 0.73 -0.8 728,980 - B158DRAFT_0725 0.74 -0.2 729,041 + B158DRAFT_0725 0.77 +0.1 729,049 - B158DRAFT_0725 0.77 +0.6 729,049 - B158DRAFT_0725 0.77 +0.3 729,060 + B158DRAFT_0725 0.78 +0.3 729,068 - B158DRAFT_0725 0.78 -0.4 729,068 - B158DRAFT_0725 0.78 -0.1 729,124 + B158DRAFT_0725 0.81 +0.6 729,129 + B158DRAFT_0725 0.82 +0.1 729,190 + B158DRAFT_0725 0.85 -0.3 729,290 - +0.2 729,311 - +0.6 729,311 - +0.4 729,369 + -3.6 729,369 + +0.7 729,377 - +1.6 729,389 + -1.3 729,745 + B158DRAFT_0726 0.24 +0.4 729,802 - B158DRAFT_0726 0.39 +0.0 729,804 + B158DRAFT_0726 0.40 -1.1 729,834 + B158DRAFT_0726 0.48 -0.1 729,834 + B158DRAFT_0726 0.48 +0.6 729,849 + B158DRAFT_0726 0.52 -0.4 730,117 - B158DRAFT_0727 0.19 -4.4 730,363 + B158DRAFT_0727 0.75 -0.2 730,368 + B158DRAFT_0727 0.76 -2.0 730,368 + B158DRAFT_0727 0.76 -1.3 730,368 + B158DRAFT_0727 0.76 -0.5 730,404 + B158DRAFT_0727 0.85 -0.9 730,559 + B158DRAFT_0728 0.16 -0.8 730,559 + B158DRAFT_0728 0.16 +0.8 730,567 - B158DRAFT_0728 0.18 -1.0 730,596 + B158DRAFT_0728 0.23 -1.7 730,598 + B158DRAFT_0728 0.23 -1.0 730,598 + B158DRAFT_0728 0.23 +1.2 730,606 - B158DRAFT_0728 0.25 +0.0 730,684 + B158DRAFT_0728 0.39 +0.2 730,714 - B158DRAFT_0728 0.44 +0.1
Or see this region's nucleotide sequence