Experiment: m.b. Gentamicin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0545 and B158DRAFT_0546 are separated by 68 nucleotides B158DRAFT_0546 and B158DRAFT_0547 are separated by 69 nucleotides B158DRAFT_0547 and B158DRAFT_0548 are separated by 111 nucleotides
B158DRAFT_0545: B158DRAFT_0545 - glycine dehydrogenase (decarboxylating), at 550,642 to 553,527
_0545
B158DRAFT_0546: B158DRAFT_0546 - Tetrapyrrole (Corrin/Porphyrin) Methylases., at 553,596 to 554,396
_0546
B158DRAFT_0547: B158DRAFT_0547 - Aromatic-ring-opening dioxygenase LigAB, LigA subunit., at 554,466 to 554,687
_0547
B158DRAFT_0548: B158DRAFT_0548 - hypothetical protein, at 554,799 to 555,863
_0548
Position (kb) 554
555 Strain fitness (log2 ratio) -2
-1
0
1 at 553.529 kb on - strand at 553.619 kb on - strand at 553.650 kb on + strand at 553.698 kb on + strand, within B158DRAFT_0546 at 553.744 kb on + strand, within B158DRAFT_0546 at 553.752 kb on - strand, within B158DRAFT_0546 at 553.850 kb on + strand, within B158DRAFT_0546 at 553.858 kb on - strand, within B158DRAFT_0546 at 553.952 kb on + strand, within B158DRAFT_0546 at 554.022 kb on + strand, within B158DRAFT_0546 at 554.130 kb on - strand, within B158DRAFT_0546 at 554.152 kb on + strand, within B158DRAFT_0546 at 554.243 kb on + strand, within B158DRAFT_0546 at 554.251 kb on - strand, within B158DRAFT_0546 at 554.251 kb on - strand, within B158DRAFT_0546 at 554.321 kb on + strand at 554.396 kb on - strand at 554.526 kb on - strand, within B158DRAFT_0547 at 554.618 kb on + strand, within B158DRAFT_0547 at 554.733 kb on + strand at 554.888 kb on + strand at 554.920 kb on + strand, within B158DRAFT_0548 at 554.920 kb on + strand, within B158DRAFT_0548 at 554.920 kb on + strand, within B158DRAFT_0548 at 554.938 kb on - strand, within B158DRAFT_0548 at 554.943 kb on - strand, within B158DRAFT_0548 at 555.005 kb on + strand, within B158DRAFT_0548 at 555.013 kb on - strand, within B158DRAFT_0548 at 555.147 kb on + strand, within B158DRAFT_0548 at 555.206 kb on - strand, within B158DRAFT_0548 at 555.287 kb on - strand, within B158DRAFT_0548
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Gentamicin 0.1 mg/ml remove 553,529 - -0.0 553,619 - +0.5 553,650 + -0.1 553,698 + B158DRAFT_0546 0.13 +1.6 553,744 + B158DRAFT_0546 0.18 -0.9 553,752 - B158DRAFT_0546 0.19 -0.4 553,850 + B158DRAFT_0546 0.32 -0.4 553,858 - B158DRAFT_0546 0.33 -1.5 553,952 + B158DRAFT_0546 0.44 -2.0 554,022 + B158DRAFT_0546 0.53 -0.0 554,130 - B158DRAFT_0546 0.67 -0.1 554,152 + B158DRAFT_0546 0.69 +0.3 554,243 + B158DRAFT_0546 0.81 -1.6 554,251 - B158DRAFT_0546 0.82 +0.1 554,251 - B158DRAFT_0546 0.82 -0.6 554,321 + +0.5 554,396 - +0.1 554,526 - B158DRAFT_0547 0.27 -1.0 554,618 + B158DRAFT_0547 0.68 +0.9 554,733 + -0.3 554,888 + -1.9 554,920 + B158DRAFT_0548 0.11 -1.3 554,920 + B158DRAFT_0548 0.11 -0.4 554,920 + B158DRAFT_0548 0.11 -1.9 554,938 - B158DRAFT_0548 0.13 -0.9 554,943 - B158DRAFT_0548 0.14 +0.2 555,005 + B158DRAFT_0548 0.19 -0.3 555,013 - B158DRAFT_0548 0.20 +0.1 555,147 + B158DRAFT_0548 0.33 +0.1 555,206 - B158DRAFT_0548 0.38 -0.7 555,287 - B158DRAFT_0548 0.46 +0.1
Or see this region's nucleotide sequence