Experiment: m.b. Gentamicin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0132 and B158DRAFT_0133 are separated by 62 nucleotides B158DRAFT_0133 and B158DRAFT_0134 are separated by 70 nucleotides B158DRAFT_0134 and B158DRAFT_0135 are separated by 35 nucleotides B158DRAFT_0135 and B158DRAFT_0136 are separated by 27 nucleotides
B158DRAFT_0132: B158DRAFT_0132 - hypothetical protein, at 130,352 to 131,191
_0132
B158DRAFT_0133: B158DRAFT_0133 - Uncharacterized iron-regulated protein, at 131,254 to 131,937
_0133
B158DRAFT_0134: B158DRAFT_0134 - Heme/copper-type cytochrome/quinol oxidase, subunit 3, at 132,008 to 132,880
_0134
B158DRAFT_0135: B158DRAFT_0135 - Cytochrome oxidase assembly factor, at 132,916 to 133,485
_0135
B158DRAFT_0136: B158DRAFT_0136 - cytochrome c oxidase, subunit I, at 133,513 to 135,072
_0136
Position (kb) 132
133 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 131.021 kb on + strand, within B158DRAFT_0132 at 131.021 kb on + strand, within B158DRAFT_0132 at 131.029 kb on - strand, within B158DRAFT_0132 at 131.029 kb on - strand, within B158DRAFT_0132 at 131.029 kb on - strand, within B158DRAFT_0132 at 131.036 kb on + strand, within B158DRAFT_0132 at 131.041 kb on + strand, within B158DRAFT_0132 at 131.049 kb on - strand, within B158DRAFT_0132 at 131.049 kb on - strand, within B158DRAFT_0132 at 131.049 kb on - strand, within B158DRAFT_0132 at 131.049 kb on - strand, within B158DRAFT_0132 at 131.049 kb on - strand, within B158DRAFT_0132 at 131.049 kb on - strand, within B158DRAFT_0132 at 131.054 kb on - strand, within B158DRAFT_0132 at 131.056 kb on + strand, within B158DRAFT_0132 at 131.056 kb on + strand, within B158DRAFT_0132 at 131.056 kb on + strand, within B158DRAFT_0132 at 131.087 kb on + strand, within B158DRAFT_0132 at 131.152 kb on - strand at 131.154 kb on + strand at 131.164 kb on - strand at 131.201 kb on - strand at 131.318 kb on + strand at 131.318 kb on + strand at 131.326 kb on - strand, within B158DRAFT_0133 at 131.328 kb on + strand, within B158DRAFT_0133 at 131.375 kb on + strand, within B158DRAFT_0133 at 131.377 kb on + strand, within B158DRAFT_0133 at 131.377 kb on + strand, within B158DRAFT_0133 at 131.377 kb on + strand, within B158DRAFT_0133 at 131.377 kb on + strand, within B158DRAFT_0133 at 131.383 kb on - strand, within B158DRAFT_0133 at 131.383 kb on - strand, within B158DRAFT_0133 at 131.385 kb on - strand, within B158DRAFT_0133 at 131.385 kb on - strand, within B158DRAFT_0133 at 131.391 kb on - strand, within B158DRAFT_0133 at 131.419 kb on + strand, within B158DRAFT_0133 at 131.443 kb on + strand, within B158DRAFT_0133 at 131.519 kb on + strand, within B158DRAFT_0133 at 131.626 kb on - strand, within B158DRAFT_0133 at 131.634 kb on - strand, within B158DRAFT_0133 at 131.634 kb on - strand, within B158DRAFT_0133 at 131.663 kb on - strand, within B158DRAFT_0133 at 131.694 kb on + strand, within B158DRAFT_0133 at 131.712 kb on + strand, within B158DRAFT_0133 at 131.841 kb on + strand, within B158DRAFT_0133 at 131.849 kb on - strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.891 kb on - strand at 131.940 kb on - strand at 131.940 kb on - strand at 132.014 kb on - strand at 132.034 kb on + strand at 132.039 kb on + strand at 132.139 kb on - strand, within B158DRAFT_0134 at 132.276 kb on + strand, within B158DRAFT_0134 at 132.284 kb on - strand, within B158DRAFT_0134 at 132.319 kb on + strand, within B158DRAFT_0134 at 132.327 kb on - strand, within B158DRAFT_0134 at 132.419 kb on - strand, within B158DRAFT_0134 at 132.481 kb on - strand, within B158DRAFT_0134 at 132.644 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.664 kb on - strand, within B158DRAFT_0134 at 132.664 kb on - strand, within B158DRAFT_0134 at 132.664 kb on - strand, within B158DRAFT_0134 at 132.664 kb on - strand, within B158DRAFT_0134 at 132.664 kb on - strand, within B158DRAFT_0134 at 132.664 kb on - strand, within B158DRAFT_0134 at 132.664 kb on - strand, within B158DRAFT_0134 at 132.758 kb on + strand, within B158DRAFT_0134 at 132.766 kb on - strand, within B158DRAFT_0134 at 132.767 kb on + strand, within B158DRAFT_0134 at 132.767 kb on + strand, within B158DRAFT_0134 at 132.886 kb on - strand at 132.890 kb on + strand at 132.898 kb on - strand at 132.908 kb on - strand at 132.908 kb on - strand at 132.908 kb on - strand at 132.908 kb on - strand at 132.913 kb on + strand at 132.965 kb on + strand at 132.965 kb on + strand at 132.965 kb on + strand at 132.965 kb on + strand at 132.973 kb on - strand, within B158DRAFT_0135 at 132.973 kb on - strand, within B158DRAFT_0135 at 132.973 kb on - strand, within B158DRAFT_0135 at 133.011 kb on - strand, within B158DRAFT_0135 at 133.011 kb on - strand, within B158DRAFT_0135 at 133.073 kb on - strand, within B158DRAFT_0135 at 133.147 kb on + strand, within B158DRAFT_0135 at 133.155 kb on - strand, within B158DRAFT_0135 at 133.199 kb on + strand, within B158DRAFT_0135 at 133.205 kb on + strand, within B158DRAFT_0135 at 133.206 kb on + strand, within B158DRAFT_0135 at 133.207 kb on - strand, within B158DRAFT_0135 at 133.317 kb on + strand, within B158DRAFT_0135 at 133.317 kb on + strand, within B158DRAFT_0135 at 133.325 kb on - strand, within B158DRAFT_0135 at 133.410 kb on + strand, within B158DRAFT_0135 at 133.440 kb on - strand at 133.483 kb on - strand at 133.506 kb on + strand at 133.575 kb on + strand at 133.583 kb on - strand at 133.584 kb on + strand at 133.640 kb on + strand at 133.669 kb on - strand, within B158DRAFT_0136 at 133.669 kb on - strand, within B158DRAFT_0136 at 133.680 kb on - strand, within B158DRAFT_0136 at 133.692 kb on + strand, within B158DRAFT_0136 at 133.700 kb on - strand, within B158DRAFT_0136 at 133.762 kb on + strand, within B158DRAFT_0136
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Gentamicin 0.1 mg/ml remove 131,021 + B158DRAFT_0132 0.80 -0.7 131,021 + B158DRAFT_0132 0.80 -0.1 131,029 - B158DRAFT_0132 0.81 -4.3 131,029 - B158DRAFT_0132 0.81 -0.0 131,029 - B158DRAFT_0132 0.81 +0.2 131,036 + B158DRAFT_0132 0.81 -1.1 131,041 + B158DRAFT_0132 0.82 -2.3 131,049 - B158DRAFT_0132 0.83 -0.1 131,049 - B158DRAFT_0132 0.83 -0.0 131,049 - B158DRAFT_0132 0.83 -0.2 131,049 - B158DRAFT_0132 0.83 -0.5 131,049 - B158DRAFT_0132 0.83 +0.0 131,049 - B158DRAFT_0132 0.83 -1.3 131,054 - B158DRAFT_0132 0.84 -1.1 131,056 + B158DRAFT_0132 0.84 -0.3 131,056 + B158DRAFT_0132 0.84 -0.1 131,056 + B158DRAFT_0132 0.84 -0.6 131,087 + B158DRAFT_0132 0.88 -1.3 131,152 - -0.1 131,154 + -3.6 131,164 - +0.6 131,201 - -0.2 131,318 + +0.6 131,318 + -0.9 131,326 - B158DRAFT_0133 0.11 -0.4 131,328 + B158DRAFT_0133 0.11 -0.7 131,375 + B158DRAFT_0133 0.18 -0.2 131,377 + B158DRAFT_0133 0.18 +0.6 131,377 + B158DRAFT_0133 0.18 +0.2 131,377 + B158DRAFT_0133 0.18 -0.7 131,377 + B158DRAFT_0133 0.18 +0.1 131,383 - B158DRAFT_0133 0.19 -0.3 131,383 - B158DRAFT_0133 0.19 +0.1 131,385 - B158DRAFT_0133 0.19 -0.5 131,385 - B158DRAFT_0133 0.19 -1.0 131,391 - B158DRAFT_0133 0.20 -0.0 131,419 + B158DRAFT_0133 0.24 +0.3 131,443 + B158DRAFT_0133 0.28 -0.1 131,519 + B158DRAFT_0133 0.39 -0.1 131,626 - B158DRAFT_0133 0.54 -0.4 131,634 - B158DRAFT_0133 0.56 +0.2 131,634 - B158DRAFT_0133 0.56 +0.5 131,663 - B158DRAFT_0133 0.60 -0.0 131,694 + B158DRAFT_0133 0.64 -0.1 131,712 + B158DRAFT_0133 0.67 +0.4 131,841 + B158DRAFT_0133 0.86 +0.5 131,849 - B158DRAFT_0133 0.87 +0.8 131,868 + B158DRAFT_0133 0.90 -0.2 131,868 + B158DRAFT_0133 0.90 +0.2 131,868 + B158DRAFT_0133 0.90 +0.5 131,868 + B158DRAFT_0133 0.90 -1.0 131,868 + B158DRAFT_0133 0.90 +0.7 131,868 + B158DRAFT_0133 0.90 +0.3 131,868 + B158DRAFT_0133 0.90 +0.4 131,868 + B158DRAFT_0133 0.90 -0.3 131,868 + B158DRAFT_0133 0.90 +0.1 131,868 + B158DRAFT_0133 0.90 -2.1 131,868 + B158DRAFT_0133 0.90 +0.1 131,868 + B158DRAFT_0133 0.90 +0.3 131,868 + B158DRAFT_0133 0.90 +0.6 131,868 + B158DRAFT_0133 0.90 +0.3 131,868 + B158DRAFT_0133 0.90 +2.0 131,868 + B158DRAFT_0133 0.90 -0.9 131,868 + B158DRAFT_0133 0.90 -0.9 131,868 + B158DRAFT_0133 0.90 +0.0 131,868 + B158DRAFT_0133 0.90 +0.1 131,868 + B158DRAFT_0133 0.90 +0.5 131,868 + B158DRAFT_0133 0.90 -0.0 131,868 + B158DRAFT_0133 0.90 +0.7 131,876 - -0.0 131,876 - -0.2 131,876 - -0.8 131,876 - +0.3 131,876 - -3.2 131,876 - +0.9 131,876 - +0.2 131,876 - +0.1 131,876 - +0.5 131,876 - +0.9 131,876 - +1.0 131,876 - -0.7 131,876 - -0.2 131,876 - +0.3 131,876 - -4.2 131,891 - +0.7 131,940 - +0.4 131,940 - +0.1 132,014 - -0.6 132,034 + -0.0 132,039 + +0.6 132,139 - B158DRAFT_0134 0.15 +1.1 132,276 + B158DRAFT_0134 0.31 +3.0 132,284 - B158DRAFT_0134 0.32 +1.3 132,319 + B158DRAFT_0134 0.36 -0.4 132,327 - B158DRAFT_0134 0.37 +0.0 132,419 - B158DRAFT_0134 0.47 +1.1 132,481 - B158DRAFT_0134 0.54 +0.9 132,644 + B158DRAFT_0134 0.73 -0.1 132,656 + B158DRAFT_0134 0.74 -0.6 132,656 + B158DRAFT_0134 0.74 -0.1 132,656 + B158DRAFT_0134 0.74 +1.3 132,656 + B158DRAFT_0134 0.74 +1.0 132,656 + B158DRAFT_0134 0.74 +0.6 132,656 + B158DRAFT_0134 0.74 +1.2 132,656 + B158DRAFT_0134 0.74 -0.8 132,656 + B158DRAFT_0134 0.74 +0.9 132,656 + B158DRAFT_0134 0.74 +2.5 132,656 + B158DRAFT_0134 0.74 +1.7 132,664 - B158DRAFT_0134 0.75 +1.2 132,664 - B158DRAFT_0134 0.75 +1.7 132,664 - B158DRAFT_0134 0.75 +2.9 132,664 - B158DRAFT_0134 0.75 +1.3 132,664 - B158DRAFT_0134 0.75 +0.9 132,664 - B158DRAFT_0134 0.75 +0.7 132,664 - B158DRAFT_0134 0.75 +1.1 132,758 + B158DRAFT_0134 0.86 +1.6 132,766 - B158DRAFT_0134 0.87 +1.4 132,767 + B158DRAFT_0134 0.87 +0.5 132,767 + B158DRAFT_0134 0.87 +1.3 132,886 - +1.2 132,890 + +0.5 132,898 - +1.2 132,908 - +0.9 132,908 - +0.8 132,908 - +0.6 132,908 - +0.6 132,913 + +1.2 132,965 + +0.9 132,965 + +0.9 132,965 + +0.5 132,965 + +1.7 132,973 - B158DRAFT_0135 0.10 +2.3 132,973 - B158DRAFT_0135 0.10 +1.6 132,973 - B158DRAFT_0135 0.10 +0.8 133,011 - B158DRAFT_0135 0.17 +0.7 133,011 - B158DRAFT_0135 0.17 +1.7 133,073 - B158DRAFT_0135 0.28 +1.6 133,147 + B158DRAFT_0135 0.41 -0.1 133,155 - B158DRAFT_0135 0.42 +1.1 133,199 + B158DRAFT_0135 0.50 +1.7 133,205 + B158DRAFT_0135 0.51 +1.3 133,206 + B158DRAFT_0135 0.51 +1.7 133,207 - B158DRAFT_0135 0.51 +2.2 133,317 + B158DRAFT_0135 0.70 +1.2 133,317 + B158DRAFT_0135 0.70 +1.5 133,325 - B158DRAFT_0135 0.72 +0.9 133,410 + B158DRAFT_0135 0.87 +1.5 133,440 - -1.1 133,483 - +2.9 133,506 + -0.4 133,575 + +0.4 133,583 - +1.1 133,584 + +1.6 133,640 + -0.1 133,669 - B158DRAFT_0136 0.10 +0.0 133,669 - B158DRAFT_0136 0.10 +1.2 133,680 - B158DRAFT_0136 0.11 +1.1 133,692 + B158DRAFT_0136 0.11 +2.3 133,700 - B158DRAFT_0136 0.12 -0.2 133,762 + B158DRAFT_0136 0.16 -0.4
Or see this region's nucleotide sequence