Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0131

Experiment: m.b. Gentamicin 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0130 and B158DRAFT_0131 are separated by 82 nucleotidesB158DRAFT_0131 and B158DRAFT_0132 are separated by 60 nucleotidesB158DRAFT_0132 and B158DRAFT_0133 are separated by 62 nucleotides B158DRAFT_0130: B158DRAFT_0130 - uncharacterized domain HDIG, at 127,888 to 129,201 _0130 B158DRAFT_0131: B158DRAFT_0131 - Predicted hydrolase of the alpha/beta-hydrolase fold, at 129,284 to 130,291 _0131 B158DRAFT_0132: B158DRAFT_0132 - hypothetical protein, at 130,352 to 131,191 _0132 B158DRAFT_0133: B158DRAFT_0133 - Uncharacterized iron-regulated protein, at 131,254 to 131,937 _0133 Position (kb) 129 130 131Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 128.285 kb on - strand, within B158DRAFT_0130at 128.306 kb on - strand, within B158DRAFT_0130at 128.363 kb on + strand, within B158DRAFT_0130at 128.363 kb on + strand, within B158DRAFT_0130at 128.363 kb on + strand, within B158DRAFT_0130at 128.371 kb on - strand, within B158DRAFT_0130at 128.371 kb on - strand, within B158DRAFT_0130at 128.459 kb on + strand, within B158DRAFT_0130at 128.459 kb on + strand, within B158DRAFT_0130at 128.459 kb on + strand, within B158DRAFT_0130at 128.467 kb on - strand, within B158DRAFT_0130at 128.531 kb on + strand, within B158DRAFT_0130at 128.531 kb on + strand, within B158DRAFT_0130at 128.531 kb on + strand, within B158DRAFT_0130at 128.531 kb on + strand, within B158DRAFT_0130at 128.531 kb on + strand, within B158DRAFT_0130at 128.531 kb on + strand, within B158DRAFT_0130at 128.531 kb on + strand, within B158DRAFT_0130at 128.531 kb on + strand, within B158DRAFT_0130at 128.531 kb on + strand, within B158DRAFT_0130at 128.531 kb on + strand, within B158DRAFT_0130at 128.531 kb on + strand, within B158DRAFT_0130at 128.531 kb on + strand, within B158DRAFT_0130at 128.531 kb on + strand, within B158DRAFT_0130at 128.531 kb on + strand, within B158DRAFT_0130at 128.531 kb on + strand, within B158DRAFT_0130at 128.531 kb on + strand, within B158DRAFT_0130at 128.531 kb on + strand, within B158DRAFT_0130at 128.531 kb on + strand, within B158DRAFT_0130at 128.531 kb on + strand, within B158DRAFT_0130at 128.531 kb on + strand, within B158DRAFT_0130at 128.531 kb on + strand, within B158DRAFT_0130at 128.531 kb on + strand, within B158DRAFT_0130at 128.531 kb on + strand, within B158DRAFT_0130at 128.539 kb on - strand, within B158DRAFT_0130at 128.539 kb on - strand, within B158DRAFT_0130at 128.539 kb on - strand, within B158DRAFT_0130at 128.539 kb on - strand, within B158DRAFT_0130at 128.539 kb on - strand, within B158DRAFT_0130at 128.539 kb on - strand, within B158DRAFT_0130at 128.539 kb on - strand, within B158DRAFT_0130at 128.539 kb on - strand, within B158DRAFT_0130at 128.539 kb on - strand, within B158DRAFT_0130at 128.539 kb on - strand, within B158DRAFT_0130at 128.539 kb on - strand, within B158DRAFT_0130at 128.539 kb on - strand, within B158DRAFT_0130at 128.539 kb on - strand, within B158DRAFT_0130at 128.539 kb on - strand, within B158DRAFT_0130at 128.548 kb on - strand, within B158DRAFT_0130at 128.558 kb on - strand, within B158DRAFT_0130at 128.621 kb on + strand, within B158DRAFT_0130at 128.621 kb on + strand, within B158DRAFT_0130at 128.698 kb on + strand, within B158DRAFT_0130at 128.698 kb on + strand, within B158DRAFT_0130at 128.698 kb on - strand, within B158DRAFT_0130at 128.743 kb on + strand, within B158DRAFT_0130at 128.748 kb on + strand, within B158DRAFT_0130at 128.785 kb on + strand, within B158DRAFT_0130at 128.819 kb on + strand, within B158DRAFT_0130at 128.857 kb on + strand, within B158DRAFT_0130at 128.907 kb on + strand, within B158DRAFT_0130at 129.004 kb on - strand, within B158DRAFT_0130at 129.004 kb on - strand, within B158DRAFT_0130at 129.027 kb on + strand, within B158DRAFT_0130at 129.037 kb on + strand, within B158DRAFT_0130at 129.045 kb on - strand, within B158DRAFT_0130at 129.045 kb on - strand, within B158DRAFT_0130at 129.053 kb on + strand, within B158DRAFT_0130at 129.053 kb on + strand, within B158DRAFT_0130at 129.061 kb on - strand, within B158DRAFT_0130at 129.061 kb on - strand, within B158DRAFT_0130at 129.063 kb on + strand, within B158DRAFT_0130at 129.099 kb on + strandat 129.109 kb on + strandat 129.230 kb on - strandat 129.269 kb on + strandat 129.270 kb on - strandat 129.566 kb on + strand, within B158DRAFT_0131at 129.566 kb on + strand, within B158DRAFT_0131at 129.566 kb on + strand, within B158DRAFT_0131at 129.574 kb on - strand, within B158DRAFT_0131at 129.642 kb on + strand, within B158DRAFT_0131at 129.650 kb on - strand, within B158DRAFT_0131at 129.664 kb on + strand, within B158DRAFT_0131at 129.808 kb on - strand, within B158DRAFT_0131at 129.845 kb on - strand, within B158DRAFT_0131at 129.966 kb on + strand, within B158DRAFT_0131at 130.032 kb on - strand, within B158DRAFT_0131at 130.114 kb on - strand, within B158DRAFT_0131at 130.120 kb on - strand, within B158DRAFT_0131at 130.120 kb on - strand, within B158DRAFT_0131at 130.157 kb on + strand, within B158DRAFT_0131at 130.298 kb on + strandat 130.392 kb on + strandat 130.392 kb on + strandat 130.400 kb on - strandat 130.402 kb on - strandat 130.440 kb on - strand, within B158DRAFT_0132at 130.451 kb on - strand, within B158DRAFT_0132at 130.473 kb on + strand, within B158DRAFT_0132at 130.569 kb on + strand, within B158DRAFT_0132at 130.577 kb on + strand, within B158DRAFT_0132at 130.577 kb on - strand, within B158DRAFT_0132at 130.658 kb on + strand, within B158DRAFT_0132at 130.666 kb on - strand, within B158DRAFT_0132at 130.666 kb on - strand, within B158DRAFT_0132at 130.666 kb on - strand, within B158DRAFT_0132at 130.826 kb on - strand, within B158DRAFT_0132at 130.875 kb on + strand, within B158DRAFT_0132at 130.883 kb on - strand, within B158DRAFT_0132at 130.883 kb on - strand, within B158DRAFT_0132at 130.896 kb on - strand, within B158DRAFT_0132at 130.910 kb on + strand, within B158DRAFT_0132at 130.917 kb on - strand, within B158DRAFT_0132at 130.951 kb on + strand, within B158DRAFT_0132at 130.959 kb on - strand, within B158DRAFT_0132at 130.959 kb on - strand, within B158DRAFT_0132at 130.959 kb on - strand, within B158DRAFT_0132at 130.965 kb on + strand, within B158DRAFT_0132at 131.021 kb on + strand, within B158DRAFT_0132at 131.021 kb on + strand, within B158DRAFT_0132at 131.029 kb on - strand, within B158DRAFT_0132at 131.029 kb on - strand, within B158DRAFT_0132at 131.029 kb on - strand, within B158DRAFT_0132at 131.036 kb on + strand, within B158DRAFT_0132at 131.041 kb on + strand, within B158DRAFT_0132at 131.049 kb on - strand, within B158DRAFT_0132at 131.049 kb on - strand, within B158DRAFT_0132at 131.049 kb on - strand, within B158DRAFT_0132at 131.049 kb on - strand, within B158DRAFT_0132at 131.049 kb on - strand, within B158DRAFT_0132at 131.049 kb on - strand, within B158DRAFT_0132at 131.054 kb on - strand, within B158DRAFT_0132at 131.056 kb on + strand, within B158DRAFT_0132at 131.056 kb on + strand, within B158DRAFT_0132at 131.056 kb on + strand, within B158DRAFT_0132at 131.087 kb on + strand, within B158DRAFT_0132at 131.152 kb on - strandat 131.154 kb on + strandat 131.164 kb on - strandat 131.201 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Gentamicin 0.1 mg/ml
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128,285 - B158DRAFT_0130 0.30 -0.2
128,306 - B158DRAFT_0130 0.32 -0.4
128,363 + B158DRAFT_0130 0.36 -0.6
128,363 + B158DRAFT_0130 0.36 +0.2
128,363 + B158DRAFT_0130 0.36 -0.3
128,371 - B158DRAFT_0130 0.37 -0.4
128,371 - B158DRAFT_0130 0.37 +0.6
128,459 + B158DRAFT_0130 0.43 -0.6
128,459 + B158DRAFT_0130 0.43 -0.5
128,459 + B158DRAFT_0130 0.43 -0.2
128,467 - B158DRAFT_0130 0.44 -0.7
128,531 + B158DRAFT_0130 0.49 -0.3
128,531 + B158DRAFT_0130 0.49 +0.6
128,531 + B158DRAFT_0130 0.49 -2.9
128,531 + B158DRAFT_0130 0.49 +0.3
128,531 + B158DRAFT_0130 0.49 -0.4
128,531 + B158DRAFT_0130 0.49 -1.1
128,531 + B158DRAFT_0130 0.49 -0.5
128,531 + B158DRAFT_0130 0.49 -0.4
128,531 + B158DRAFT_0130 0.49 -0.2
128,531 + B158DRAFT_0130 0.49 +0.0
128,531 + B158DRAFT_0130 0.49 -0.6
128,531 + B158DRAFT_0130 0.49 -3.6
128,531 + B158DRAFT_0130 0.49 -0.7
128,531 + B158DRAFT_0130 0.49 +0.2
128,531 + B158DRAFT_0130 0.49 -0.8
128,531 + B158DRAFT_0130 0.49 -0.2
128,531 + B158DRAFT_0130 0.49 -0.9
128,531 + B158DRAFT_0130 0.49 +0.5
128,531 + B158DRAFT_0130 0.49 +0.2
128,531 + B158DRAFT_0130 0.49 +0.3
128,531 + B158DRAFT_0130 0.49 -0.3
128,531 + B158DRAFT_0130 0.49 +0.2
128,531 + B158DRAFT_0130 0.49 +0.4
128,539 - B158DRAFT_0130 0.50 -0.2
128,539 - B158DRAFT_0130 0.50 +1.0
128,539 - B158DRAFT_0130 0.50 +0.5
128,539 - B158DRAFT_0130 0.50 -0.1
128,539 - B158DRAFT_0130 0.50 -0.6
128,539 - B158DRAFT_0130 0.50 +0.1
128,539 - B158DRAFT_0130 0.50 -1.4
128,539 - B158DRAFT_0130 0.50 -0.7
128,539 - B158DRAFT_0130 0.50 -0.1
128,539 - B158DRAFT_0130 0.50 -0.2
128,539 - B158DRAFT_0130 0.50 -0.2
128,539 - B158DRAFT_0130 0.50 -0.0
128,539 - B158DRAFT_0130 0.50 +0.1
128,539 - B158DRAFT_0130 0.50 +0.2
128,548 - B158DRAFT_0130 0.50 -0.2
128,558 - B158DRAFT_0130 0.51 +0.3
128,621 + B158DRAFT_0130 0.56 -0.6
128,621 + B158DRAFT_0130 0.56 +0.9
128,698 + B158DRAFT_0130 0.62 +0.3
128,698 + B158DRAFT_0130 0.62 -3.6
128,698 - B158DRAFT_0130 0.62 -0.6
128,743 + B158DRAFT_0130 0.65 +1.8
128,748 + B158DRAFT_0130 0.65 -1.5
128,785 + B158DRAFT_0130 0.68 -3.8
128,819 + B158DRAFT_0130 0.71 +0.8
128,857 + B158DRAFT_0130 0.74 +0.4
128,907 + B158DRAFT_0130 0.78 -0.5
129,004 - B158DRAFT_0130 0.85 -3.9
129,004 - B158DRAFT_0130 0.85 -0.2
129,027 + B158DRAFT_0130 0.87 -0.4
129,037 + B158DRAFT_0130 0.87 -0.4
129,045 - B158DRAFT_0130 0.88 +0.3
129,045 - B158DRAFT_0130 0.88 +0.3
129,053 + B158DRAFT_0130 0.89 -0.2
129,053 + B158DRAFT_0130 0.89 -1.9
129,061 - B158DRAFT_0130 0.89 +1.2
129,061 - B158DRAFT_0130 0.89 +0.7
129,063 + B158DRAFT_0130 0.89 +0.4
129,099 + +0.2
129,109 + -0.2
129,230 - +0.7
129,269 + +0.8
129,270 - +0.1
129,566 + B158DRAFT_0131 0.28 +0.2
129,566 + B158DRAFT_0131 0.28 -0.0
129,566 + B158DRAFT_0131 0.28 -0.9
129,574 - B158DRAFT_0131 0.29 -0.3
129,642 + B158DRAFT_0131 0.36 -0.2
129,650 - B158DRAFT_0131 0.36 -0.3
129,664 + B158DRAFT_0131 0.38 -0.2
129,808 - B158DRAFT_0131 0.52 +0.2
129,845 - B158DRAFT_0131 0.56 +0.7
129,966 + B158DRAFT_0131 0.68 +0.1
130,032 - B158DRAFT_0131 0.74 -0.6
130,114 - B158DRAFT_0131 0.82 -0.3
130,120 - B158DRAFT_0131 0.83 -0.2
130,120 - B158DRAFT_0131 0.83 +0.0
130,157 + B158DRAFT_0131 0.87 +0.0
130,298 + -1.2
130,392 + -0.1
130,392 + -2.7
130,400 - -0.3
130,402 - +0.2
130,440 - B158DRAFT_0132 0.10 -0.3
130,451 - B158DRAFT_0132 0.12 -0.2
130,473 + B158DRAFT_0132 0.14 -0.2
130,569 + B158DRAFT_0132 0.26 -0.4
130,577 + B158DRAFT_0132 0.27 -1.6
130,577 - B158DRAFT_0132 0.27 +0.4
130,658 + B158DRAFT_0132 0.36 -1.6
130,666 - B158DRAFT_0132 0.37 -1.0
130,666 - B158DRAFT_0132 0.37 -0.6
130,666 - B158DRAFT_0132 0.37 +1.2
130,826 - B158DRAFT_0132 0.56 +0.7
130,875 + B158DRAFT_0132 0.62 -0.3
130,883 - B158DRAFT_0132 0.63 -0.1
130,883 - B158DRAFT_0132 0.63 +0.1
130,896 - B158DRAFT_0132 0.65 +0.4
130,910 + B158DRAFT_0132 0.66 +0.6
130,917 - B158DRAFT_0132 0.67 +0.1
130,951 + B158DRAFT_0132 0.71 +0.4
130,959 - B158DRAFT_0132 0.72 +0.1
130,959 - B158DRAFT_0132 0.72 +0.6
130,959 - B158DRAFT_0132 0.72 -0.4
130,965 + B158DRAFT_0132 0.73 -1.3
131,021 + B158DRAFT_0132 0.80 -0.7
131,021 + B158DRAFT_0132 0.80 -0.1
131,029 - B158DRAFT_0132 0.81 -4.3
131,029 - B158DRAFT_0132 0.81 -0.0
131,029 - B158DRAFT_0132 0.81 +0.2
131,036 + B158DRAFT_0132 0.81 -1.1
131,041 + B158DRAFT_0132 0.82 -2.3
131,049 - B158DRAFT_0132 0.83 -0.1
131,049 - B158DRAFT_0132 0.83 -0.0
131,049 - B158DRAFT_0132 0.83 -0.2
131,049 - B158DRAFT_0132 0.83 -0.5
131,049 - B158DRAFT_0132 0.83 +0.0
131,049 - B158DRAFT_0132 0.83 -1.3
131,054 - B158DRAFT_0132 0.84 -1.1
131,056 + B158DRAFT_0132 0.84 -0.3
131,056 + B158DRAFT_0132 0.84 -0.1
131,056 + B158DRAFT_0132 0.84 -0.6
131,087 + B158DRAFT_0132 0.88 -1.3
131,152 - -0.1
131,154 + -3.6
131,164 - +0.6
131,201 - -0.2

Or see this region's nucleotide sequence