Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2020

Experiment: m.b. Gentamicin 0.3 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2019 and B158DRAFT_2020 are separated by 109 nucleotidesB158DRAFT_2020 and B158DRAFT_2021 are separated by 27 nucleotides B158DRAFT_2019: B158DRAFT_2019 - hypothetical protein, at 148,346 to 149,326 _2019 B158DRAFT_2020: B158DRAFT_2020 - Polyketide cyclase / dehydrase and lipid transport., at 149,436 to 149,975 _2020 B158DRAFT_2021: B158DRAFT_2021 - Outer membrane phospholipase A, at 150,003 to 151,283 _2021 Position (kb) 149 150Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 148.501 kb on + strand, within B158DRAFT_2019at 148.611 kb on + strand, within B158DRAFT_2019at 148.651 kb on - strand, within B158DRAFT_2019at 148.658 kb on - strand, within B158DRAFT_2019at 148.658 kb on - strand, within B158DRAFT_2019at 148.670 kb on - strand, within B158DRAFT_2019at 148.680 kb on - strand, within B158DRAFT_2019at 148.804 kb on + strand, within B158DRAFT_2019at 148.812 kb on - strand, within B158DRAFT_2019at 148.816 kb on - strand, within B158DRAFT_2019at 148.830 kb on + strand, within B158DRAFT_2019at 148.914 kb on - strand, within B158DRAFT_2019at 149.134 kb on + strand, within B158DRAFT_2019at 149.134 kb on + strand, within B158DRAFT_2019at 149.134 kb on + strand, within B158DRAFT_2019at 149.134 kb on + strand, within B158DRAFT_2019at 149.134 kb on + strand, within B158DRAFT_2019at 149.134 kb on + strand, within B158DRAFT_2019at 149.142 kb on - strand, within B158DRAFT_2019at 149.142 kb on - strand, within B158DRAFT_2019at 149.142 kb on - strand, within B158DRAFT_2019at 149.225 kb on + strand, within B158DRAFT_2019at 149.247 kb on - strandat 149.247 kb on - strandat 149.269 kb on + strandat 149.288 kb on - strandat 149.336 kb on + strandat 149.336 kb on + strandat 149.336 kb on + strandat 149.336 kb on + strandat 149.344 kb on - strandat 149.344 kb on - strandat 149.344 kb on - strandat 149.344 kb on - strandat 149.344 kb on - strandat 149.344 kb on - strandat 149.544 kb on - strand, within B158DRAFT_2020at 149.553 kb on + strand, within B158DRAFT_2020at 149.553 kb on + strand, within B158DRAFT_2020at 149.573 kb on - strand, within B158DRAFT_2020at 149.641 kb on + strand, within B158DRAFT_2020at 149.652 kb on + strand, within B158DRAFT_2020at 149.657 kb on + strand, within B158DRAFT_2020at 149.664 kb on + strand, within B158DRAFT_2020at 149.710 kb on + strand, within B158DRAFT_2020at 149.844 kb on + strand, within B158DRAFT_2020at 149.852 kb on - strand, within B158DRAFT_2020at 149.892 kb on + strand, within B158DRAFT_2020at 149.909 kb on + strand, within B158DRAFT_2020at 149.909 kb on + strand, within B158DRAFT_2020at 149.914 kb on - strand, within B158DRAFT_2020at 149.961 kb on + strandat 149.964 kb on + strandat 149.969 kb on - strandat 149.969 kb on - strandat 149.989 kb on - strandat 150.007 kb on + strandat 150.124 kb on + strandat 150.133 kb on - strand, within B158DRAFT_2021at 150.142 kb on + strand, within B158DRAFT_2021at 150.266 kb on - strand, within B158DRAFT_2021at 150.268 kb on + strand, within B158DRAFT_2021at 150.276 kb on - strand, within B158DRAFT_2021at 150.355 kb on + strand, within B158DRAFT_2021at 150.363 kb on - strand, within B158DRAFT_2021at 150.363 kb on - strand, within B158DRAFT_2021at 150.448 kb on + strand, within B158DRAFT_2021at 150.453 kb on + strand, within B158DRAFT_2021at 150.456 kb on - strand, within B158DRAFT_2021at 150.463 kb on + strand, within B158DRAFT_2021at 150.471 kb on - strand, within B158DRAFT_2021at 150.490 kb on + strand, within B158DRAFT_2021at 150.717 kb on - strand, within B158DRAFT_2021at 150.732 kb on + strand, within B158DRAFT_2021at 150.732 kb on + strand, within B158DRAFT_2021at 150.739 kb on + strand, within B158DRAFT_2021at 150.744 kb on + strand, within B158DRAFT_2021at 150.744 kb on + strand, within B158DRAFT_2021at 150.744 kb on + strand, within B158DRAFT_2021at 150.744 kb on + strand, within B158DRAFT_2021at 150.747 kb on - strand, within B158DRAFT_2021at 150.747 kb on - strand, within B158DRAFT_2021at 150.752 kb on - strand, within B158DRAFT_2021at 150.847 kb on - strand, within B158DRAFT_2021at 150.871 kb on - strand, within B158DRAFT_2021at 150.879 kb on + strand, within B158DRAFT_2021at 150.887 kb on - strand, within B158DRAFT_2021at 150.935 kb on + strand, within B158DRAFT_2021at 150.940 kb on + strand, within B158DRAFT_2021at 150.940 kb on + strand, within B158DRAFT_2021at 150.940 kb on + strand, within B158DRAFT_2021at 150.948 kb on - strand, within B158DRAFT_2021at 150.948 kb on - strand, within B158DRAFT_2021at 150.948 kb on - strand, within B158DRAFT_2021at 150.948 kb on - strand, within B158DRAFT_2021at 150.950 kb on + strand, within B158DRAFT_2021at 150.950 kb on + strand, within B158DRAFT_2021at 150.950 kb on + strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Gentamicin 0.3 mg/ml
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148,501 + B158DRAFT_2019 0.16 +1.4
148,611 + B158DRAFT_2019 0.27 -0.3
148,651 - B158DRAFT_2019 0.31 -0.8
148,658 - B158DRAFT_2019 0.32 -0.3
148,658 - B158DRAFT_2019 0.32 +0.0
148,670 - B158DRAFT_2019 0.33 -0.1
148,680 - B158DRAFT_2019 0.34 +0.1
148,804 + B158DRAFT_2019 0.47 +0.3
148,812 - B158DRAFT_2019 0.48 -0.1
148,816 - B158DRAFT_2019 0.48 -0.4
148,830 + B158DRAFT_2019 0.49 +1.3
148,914 - B158DRAFT_2019 0.58 +0.2
149,134 + B158DRAFT_2019 0.80 +0.1
149,134 + B158DRAFT_2019 0.80 +0.3
149,134 + B158DRAFT_2019 0.80 -1.4
149,134 + B158DRAFT_2019 0.80 -1.0
149,134 + B158DRAFT_2019 0.80 +0.0
149,134 + B158DRAFT_2019 0.80 +0.5
149,142 - B158DRAFT_2019 0.81 +0.0
149,142 - B158DRAFT_2019 0.81 -0.8
149,142 - B158DRAFT_2019 0.81 +0.3
149,225 + B158DRAFT_2019 0.90 +0.3
149,247 - -0.6
149,247 - +0.2
149,269 + -3.4
149,288 - -1.4
149,336 + -0.2
149,336 + -0.7
149,336 + -0.8
149,336 + -0.2
149,344 - +0.5
149,344 - -0.0
149,344 - +0.3
149,344 - -1.3
149,344 - +0.0
149,344 - -3.1
149,544 - B158DRAFT_2020 0.20 -0.1
149,553 + B158DRAFT_2020 0.22 +0.0
149,553 + B158DRAFT_2020 0.22 -0.7
149,573 - B158DRAFT_2020 0.25 -0.6
149,641 + B158DRAFT_2020 0.38 -0.3
149,652 + B158DRAFT_2020 0.40 +0.1
149,657 + B158DRAFT_2020 0.41 +1.3
149,664 + B158DRAFT_2020 0.42 +0.3
149,710 + B158DRAFT_2020 0.51 +0.3
149,844 + B158DRAFT_2020 0.76 -1.1
149,852 - B158DRAFT_2020 0.77 +0.1
149,892 + B158DRAFT_2020 0.84 -0.2
149,909 + B158DRAFT_2020 0.88 -0.3
149,909 + B158DRAFT_2020 0.88 -0.6
149,914 - B158DRAFT_2020 0.89 -0.7
149,961 + -0.3
149,964 + +0.3
149,969 - -0.1
149,969 - -0.9
149,989 - +0.5
150,007 + -0.4
150,124 + -0.6
150,133 - B158DRAFT_2021 0.10 +0.8
150,142 + B158DRAFT_2021 0.11 -0.5
150,266 - B158DRAFT_2021 0.21 -0.1
150,268 + B158DRAFT_2021 0.21 +1.6
150,276 - B158DRAFT_2021 0.21 -1.6
150,355 + B158DRAFT_2021 0.27 +0.2
150,363 - B158DRAFT_2021 0.28 +0.5
150,363 - B158DRAFT_2021 0.28 +0.1
150,448 + B158DRAFT_2021 0.35 +0.4
150,453 + B158DRAFT_2021 0.35 -0.2
150,456 - B158DRAFT_2021 0.35 +0.3
150,463 + B158DRAFT_2021 0.36 +0.2
150,471 - B158DRAFT_2021 0.37 -0.6
150,490 + B158DRAFT_2021 0.38 +0.3
150,717 - B158DRAFT_2021 0.56 +0.5
150,732 + B158DRAFT_2021 0.57 +0.2
150,732 + B158DRAFT_2021 0.57 +0.4
150,739 + B158DRAFT_2021 0.57 +0.5
150,744 + B158DRAFT_2021 0.58 +0.7
150,744 + B158DRAFT_2021 0.58 -3.3
150,744 + B158DRAFT_2021 0.58 +0.0
150,744 + B158DRAFT_2021 0.58 +0.3
150,747 - B158DRAFT_2021 0.58 +0.1
150,747 - B158DRAFT_2021 0.58 +0.2
150,752 - B158DRAFT_2021 0.58 +0.3
150,847 - B158DRAFT_2021 0.66 -0.3
150,871 - B158DRAFT_2021 0.68 -0.1
150,879 + B158DRAFT_2021 0.68 -0.4
150,887 - B158DRAFT_2021 0.69 -0.0
150,935 + B158DRAFT_2021 0.73 -0.7
150,940 + B158DRAFT_2021 0.73 -0.6
150,940 + B158DRAFT_2021 0.73 +0.4
150,940 + B158DRAFT_2021 0.73 -0.3
150,948 - B158DRAFT_2021 0.74 +0.2
150,948 - B158DRAFT_2021 0.74 +0.2
150,948 - B158DRAFT_2021 0.74 -2.5
150,948 - B158DRAFT_2021 0.74 +0.2
150,950 + B158DRAFT_2021 0.74 +0.1
150,950 + B158DRAFT_2021 0.74 +1.9
150,950 + B158DRAFT_2021 0.74 +0.2
150,958 - B158DRAFT_2021 0.75 +1.0
150,958 - B158DRAFT_2021 0.75 -0.1
150,958 - B158DRAFT_2021 0.75 +0.3
150,958 - B158DRAFT_2021 0.75 +0.3
150,958 - B158DRAFT_2021 0.75 +1.4
150,958 - B158DRAFT_2021 0.75 +0.8

Or see this region's nucleotide sequence