Experiment: m.b. Gentamicin 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1940 and B158DRAFT_1941 are separated by 164 nucleotides B158DRAFT_1941 and B158DRAFT_1942 are separated by 321 nucleotides
B158DRAFT_1940: B158DRAFT_1940 - Gametolysin peptidase M11., at 75,090 to 77,096
_1940
B158DRAFT_1941: B158DRAFT_1941 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 77,261 to 78,607
_1941
B158DRAFT_1942: B158DRAFT_1942 - Cytochrome B561, at 78,929 to 79,459
_1942
Position (kb)
77
78
79 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 76.263 kb on + strand, within B158DRAFT_1940 at 76.271 kb on - strand, within B158DRAFT_1940 at 76.271 kb on - strand, within B158DRAFT_1940 at 76.291 kb on + strand, within B158DRAFT_1940 at 76.311 kb on - strand, within B158DRAFT_1940 at 76.323 kb on + strand, within B158DRAFT_1940 at 76.340 kb on - strand, within B158DRAFT_1940 at 76.354 kb on - strand, within B158DRAFT_1940 at 76.367 kb on - strand, within B158DRAFT_1940 at 76.379 kb on + strand, within B158DRAFT_1940 at 76.425 kb on + strand, within B158DRAFT_1940 at 76.430 kb on + strand, within B158DRAFT_1940 at 76.433 kb on - strand, within B158DRAFT_1940 at 76.438 kb on - strand, within B158DRAFT_1940 at 76.438 kb on - strand, within B158DRAFT_1940 at 76.478 kb on - strand, within B158DRAFT_1940 at 76.528 kb on + strand, within B158DRAFT_1940 at 76.536 kb on - strand, within B158DRAFT_1940 at 76.545 kb on + strand, within B158DRAFT_1940 at 76.562 kb on - strand, within B158DRAFT_1940 at 76.648 kb on + strand, within B158DRAFT_1940 at 76.656 kb on - strand, within B158DRAFT_1940 at 76.750 kb on + strand, within B158DRAFT_1940 at 76.755 kb on + strand, within B158DRAFT_1940 at 76.758 kb on - strand, within B158DRAFT_1940 at 76.758 kb on - strand, within B158DRAFT_1940 at 76.762 kb on + strand, within B158DRAFT_1940 at 76.762 kb on + strand, within B158DRAFT_1940 at 76.762 kb on + strand, within B158DRAFT_1940 at 76.762 kb on + strand, within B158DRAFT_1940 at 76.765 kb on - strand, within B158DRAFT_1940 at 76.770 kb on - strand, within B158DRAFT_1940 at 76.833 kb on - strand, within B158DRAFT_1940 at 76.839 kb on - strand, within B158DRAFT_1940 at 76.926 kb on - strand at 76.938 kb on - strand at 76.942 kb on + strand at 77.011 kb on + strand at 77.011 kb on + strand at 77.011 kb on + strand at 77.011 kb on + strand at 77.011 kb on + strand at 77.011 kb on + strand at 77.011 kb on + strand at 77.019 kb on - strand at 77.019 kb on - strand at 77.019 kb on - strand at 77.019 kb on - strand at 77.019 kb on - strand at 77.019 kb on - strand at 77.019 kb on - strand at 77.019 kb on - strand at 77.063 kb on - strand at 77.096 kb on + strand at 77.278 kb on - strand at 77.401 kb on - strand, within B158DRAFT_1941 at 77.404 kb on + strand, within B158DRAFT_1941 at 77.412 kb on - strand, within B158DRAFT_1941 at 77.412 kb on - strand, within B158DRAFT_1941 at 77.529 kb on + strand, within B158DRAFT_1941 at 77.529 kb on + strand, within B158DRAFT_1941 at 77.582 kb on + strand, within B158DRAFT_1941 at 77.590 kb on - strand, within B158DRAFT_1941 at 77.733 kb on + strand, within B158DRAFT_1941 at 77.734 kb on + strand, within B158DRAFT_1941 at 77.852 kb on - strand, within B158DRAFT_1941 at 77.895 kb on + strand, within B158DRAFT_1941 at 77.895 kb on + strand, within B158DRAFT_1941 at 77.930 kb on + strand, within B158DRAFT_1941 at 77.967 kb on - strand, within B158DRAFT_1941 at 78.013 kb on + strand, within B158DRAFT_1941 at 78.094 kb on - strand, within B158DRAFT_1941 at 78.142 kb on - strand, within B158DRAFT_1941 at 78.176 kb on + strand, within B158DRAFT_1941 at 78.184 kb on - strand, within B158DRAFT_1941 at 78.184 kb on - strand, within B158DRAFT_1941 at 78.184 kb on - strand, within B158DRAFT_1941 at 78.281 kb on - strand, within B158DRAFT_1941 at 78.893 kb on - strand at 78.990 kb on - strand, within B158DRAFT_1942 at 79.001 kb on + strand, within B158DRAFT_1942 at 79.105 kb on + strand, within B158DRAFT_1942 at 79.105 kb on + strand, within B158DRAFT_1942 at 79.112 kb on + strand, within B158DRAFT_1942 at 79.140 kb on + strand, within B158DRAFT_1942 at 79.179 kb on + strand, within B158DRAFT_1942 at 79.292 kb on + strand, within B158DRAFT_1942 at 79.292 kb on + strand, within B158DRAFT_1942 at 79.292 kb on + strand, within B158DRAFT_1942 at 79.292 kb on + strand, within B158DRAFT_1942 at 79.292 kb on + strand, within B158DRAFT_1942 at 79.300 kb on - strand, within B158DRAFT_1942 at 79.300 kb on - strand, within B158DRAFT_1942 at 79.300 kb on - strand, within B158DRAFT_1942 at 79.300 kb on - strand, within B158DRAFT_1942 at 79.300 kb on - strand, within B158DRAFT_1942 at 79.410 kb on - strand at 79.555 kb on + strand at 79.559 kb on + strand at 79.564 kb on + strand at 79.565 kb on + strand at 79.568 kb on - strand at 79.570 kb on + strand at 79.573 kb on - strand at 79.590 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Gentamicin 0.3 mg/ml remove 76,263 + B158DRAFT_1940 0.58 -0.2 76,271 - B158DRAFT_1940 0.59 +0.1 76,271 - B158DRAFT_1940 0.59 -0.5 76,291 + B158DRAFT_1940 0.60 +0.3 76,311 - B158DRAFT_1940 0.61 -0.7 76,323 + B158DRAFT_1940 0.61 -0.2 76,340 - B158DRAFT_1940 0.62 +0.1 76,354 - B158DRAFT_1940 0.63 -1.1 76,367 - B158DRAFT_1940 0.64 +0.3 76,379 + B158DRAFT_1940 0.64 -0.1 76,425 + B158DRAFT_1940 0.67 -0.0 76,430 + B158DRAFT_1940 0.67 -1.1 76,433 - B158DRAFT_1940 0.67 -0.2 76,438 - B158DRAFT_1940 0.67 +0.7 76,438 - B158DRAFT_1940 0.67 -0.1 76,478 - B158DRAFT_1940 0.69 +2.2 76,528 + B158DRAFT_1940 0.72 -0.1 76,536 - B158DRAFT_1940 0.72 -1.5 76,545 + B158DRAFT_1940 0.72 -0.0 76,562 - B158DRAFT_1940 0.73 +1.2 76,648 + B158DRAFT_1940 0.78 +0.6 76,656 - B158DRAFT_1940 0.78 +0.3 76,750 + B158DRAFT_1940 0.83 +0.3 76,755 + B158DRAFT_1940 0.83 -0.2 76,758 - B158DRAFT_1940 0.83 -1.3 76,758 - B158DRAFT_1940 0.83 -1.0 76,762 + B158DRAFT_1940 0.83 -0.4 76,762 + B158DRAFT_1940 0.83 +0.1 76,762 + B158DRAFT_1940 0.83 -0.7 76,762 + B158DRAFT_1940 0.83 -0.3 76,765 - B158DRAFT_1940 0.83 +0.2 76,770 - B158DRAFT_1940 0.84 +0.4 76,833 - B158DRAFT_1940 0.87 +0.2 76,839 - B158DRAFT_1940 0.87 +0.1 76,926 - +0.1 76,938 - -0.5 76,942 + +0.2 77,011 + +0.0 77,011 + -1.0 77,011 + -0.2 77,011 + -1.0 77,011 + -0.9 77,011 + -1.3 77,011 + +1.1 77,019 - +0.0 77,019 - -0.1 77,019 - -1.8 77,019 - -0.2 77,019 - -0.1 77,019 - -2.3 77,019 - +0.4 77,019 - -3.4 77,063 - +0.2 77,096 + -2.6 77,278 - -0.2 77,401 - B158DRAFT_1941 0.10 +0.8 77,404 + B158DRAFT_1941 0.11 -3.3 77,412 - B158DRAFT_1941 0.11 -0.2 77,412 - B158DRAFT_1941 0.11 -0.8 77,529 + B158DRAFT_1941 0.20 +2.4 77,529 + B158DRAFT_1941 0.20 -0.5 77,582 + B158DRAFT_1941 0.24 -0.4 77,590 - B158DRAFT_1941 0.24 +0.6 77,733 + B158DRAFT_1941 0.35 +0.2 77,734 + B158DRAFT_1941 0.35 -0.1 77,852 - B158DRAFT_1941 0.44 +0.3 77,895 + B158DRAFT_1941 0.47 +1.5 77,895 + B158DRAFT_1941 0.47 +0.0 77,930 + B158DRAFT_1941 0.50 -0.2 77,967 - B158DRAFT_1941 0.52 +0.6 78,013 + B158DRAFT_1941 0.56 -0.9 78,094 - B158DRAFT_1941 0.62 -0.1 78,142 - B158DRAFT_1941 0.65 +0.3 78,176 + B158DRAFT_1941 0.68 -0.6 78,184 - B158DRAFT_1941 0.69 -0.3 78,184 - B158DRAFT_1941 0.69 +0.3 78,184 - B158DRAFT_1941 0.69 +0.5 78,281 - B158DRAFT_1941 0.76 +0.2 78,893 - +0.2 78,990 - B158DRAFT_1942 0.11 -0.1 79,001 + B158DRAFT_1942 0.14 -0.1 79,105 + B158DRAFT_1942 0.33 +0.4 79,105 + B158DRAFT_1942 0.33 -0.5 79,112 + B158DRAFT_1942 0.34 +0.6 79,140 + B158DRAFT_1942 0.40 -0.5 79,179 + B158DRAFT_1942 0.47 +0.0 79,292 + B158DRAFT_1942 0.68 +0.2 79,292 + B158DRAFT_1942 0.68 +0.8 79,292 + B158DRAFT_1942 0.68 -0.1 79,292 + B158DRAFT_1942 0.68 -0.0 79,292 + B158DRAFT_1942 0.68 -1.3 79,300 - B158DRAFT_1942 0.70 +0.8 79,300 - B158DRAFT_1942 0.70 +0.5 79,300 - B158DRAFT_1942 0.70 +0.1 79,300 - B158DRAFT_1942 0.70 -0.6 79,300 - B158DRAFT_1942 0.70 -0.8 79,410 - +0.3 79,555 + +0.3 79,559 + -0.5 79,564 + +0.3 79,565 + +0.5 79,568 - -0.1 79,570 + -0.0 79,573 - -1.7 79,590 + +0.2
Or see this region's nucleotide sequence