Experiment: m.b. Gentamicin 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1510 and B158DRAFT_1511 are separated by 12 nucleotides B158DRAFT_1511 and B158DRAFT_1512 are separated by 6 nucleotides B158DRAFT_1512 and B158DRAFT_1513 are separated by 7 nucleotides B158DRAFT_1513 and B158DRAFT_1514 are separated by 165 nucleotides B158DRAFT_1514 and B158DRAFT_1515 overlap by 1 nucleotides
B158DRAFT_1510: B158DRAFT_1510 - Predicted transcriptional regulator, at 1,565,089 to 1,566,108
_1510
B158DRAFT_1511: B158DRAFT_1511 - Predicted esterase, at 1,566,121 to 1,566,690
_1511
B158DRAFT_1512: B158DRAFT_1512 - Protein of unknown function (DUF2489)., at 1,566,697 to 1,567,170
_1512
B158DRAFT_1513: B158DRAFT_1513 - tRNA_Arg_CCG, at 1,567,178 to 1,567,254
_1513
B158DRAFT_1514: B158DRAFT_1514 - Pseudouridylate synthases, 23S RNA-specific, at 1,567,420 to 1,568,088
_1514
B158DRAFT_1515: B158DRAFT_1515 - methyltransferase, putative, at 1,568,088 to 1,569,089
_1515
Position (kb)
1566
1567
1568 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1565.704 kb on + strand, within B158DRAFT_1510 at 1565.704 kb on + strand, within B158DRAFT_1510 at 1565.820 kb on + strand, within B158DRAFT_1510 at 1565.851 kb on - strand, within B158DRAFT_1510 at 1565.876 kb on + strand, within B158DRAFT_1510 at 1565.884 kb on - strand, within B158DRAFT_1510 at 1565.922 kb on + strand, within B158DRAFT_1510 at 1565.924 kb on + strand, within B158DRAFT_1510 at 1565.942 kb on - strand, within B158DRAFT_1510 at 1565.958 kb on - strand, within B158DRAFT_1510 at 1565.972 kb on + strand, within B158DRAFT_1510 at 1566.075 kb on - strand at 1566.075 kb on - strand at 1566.075 kb on - strand at 1566.084 kb on + strand at 1566.092 kb on - strand at 1566.092 kb on - strand at 1566.101 kb on - strand at 1566.109 kb on + strand at 1566.117 kb on - strand at 1566.155 kb on - strand at 1566.211 kb on + strand, within B158DRAFT_1511 at 1566.211 kb on + strand, within B158DRAFT_1511 at 1566.219 kb on - strand, within B158DRAFT_1511 at 1566.224 kb on + strand, within B158DRAFT_1511 at 1566.225 kb on - strand, within B158DRAFT_1511 at 1566.233 kb on - strand, within B158DRAFT_1511 at 1566.239 kb on + strand, within B158DRAFT_1511 at 1566.239 kb on + strand, within B158DRAFT_1511 at 1566.239 kb on + strand, within B158DRAFT_1511 at 1566.247 kb on - strand, within B158DRAFT_1511 at 1566.247 kb on - strand, within B158DRAFT_1511 at 1566.341 kb on - strand, within B158DRAFT_1511 at 1566.353 kb on + strand, within B158DRAFT_1511 at 1566.361 kb on - strand, within B158DRAFT_1511 at 1566.361 kb on - strand, within B158DRAFT_1511 at 1566.361 kb on - strand, within B158DRAFT_1511 at 1566.361 kb on - strand, within B158DRAFT_1511 at 1566.401 kb on - strand, within B158DRAFT_1511 at 1566.463 kb on - strand, within B158DRAFT_1511 at 1566.475 kb on + strand, within B158DRAFT_1511 at 1566.478 kb on + strand, within B158DRAFT_1511 at 1566.478 kb on - strand, within B158DRAFT_1511 at 1566.530 kb on + strand, within B158DRAFT_1511 at 1566.538 kb on - strand, within B158DRAFT_1511 at 1566.543 kb on - strand, within B158DRAFT_1511 at 1566.548 kb on + strand, within B158DRAFT_1511 at 1566.593 kb on + strand, within B158DRAFT_1511 at 1566.594 kb on + strand, within B158DRAFT_1511 at 1566.602 kb on - strand, within B158DRAFT_1511 at 1566.602 kb on - strand, within B158DRAFT_1511 at 1566.622 kb on + strand, within B158DRAFT_1511 at 1566.632 kb on + strand, within B158DRAFT_1511 at 1566.640 kb on - strand at 1566.640 kb on - strand at 1566.762 kb on - strand, within B158DRAFT_1512 at 1566.825 kb on - strand, within B158DRAFT_1512 at 1566.884 kb on + strand, within B158DRAFT_1512 at 1566.892 kb on - strand, within B158DRAFT_1512 at 1566.894 kb on + strand, within B158DRAFT_1512 at 1566.902 kb on - strand, within B158DRAFT_1512 at 1566.904 kb on + strand, within B158DRAFT_1512 at 1566.942 kb on + strand, within B158DRAFT_1512 at 1566.981 kb on + strand, within B158DRAFT_1512 at 1566.981 kb on + strand, within B158DRAFT_1512 at 1566.981 kb on + strand, within B158DRAFT_1512 at 1566.981 kb on + strand, within B158DRAFT_1512 at 1566.981 kb on + strand, within B158DRAFT_1512 at 1566.981 kb on + strand, within B158DRAFT_1512 at 1566.981 kb on + strand, within B158DRAFT_1512 at 1566.981 kb on + strand, within B158DRAFT_1512 at 1566.981 kb on + strand, within B158DRAFT_1512 at 1566.981 kb on + strand, within B158DRAFT_1512 at 1566.981 kb on + strand, within B158DRAFT_1512 at 1566.981 kb on + strand, within B158DRAFT_1512 at 1566.981 kb on + strand, within B158DRAFT_1512 at 1566.981 kb on + strand, within B158DRAFT_1512 at 1566.981 kb on + strand, within B158DRAFT_1512 at 1566.981 kb on + strand, within B158DRAFT_1512 at 1566.981 kb on + strand, within B158DRAFT_1512 at 1566.989 kb on - strand, within B158DRAFT_1512 at 1566.989 kb on - strand, within B158DRAFT_1512 at 1566.989 kb on - strand, within B158DRAFT_1512 at 1566.989 kb on - strand, within B158DRAFT_1512 at 1566.989 kb on - strand, within B158DRAFT_1512 at 1566.989 kb on - strand, within B158DRAFT_1512 at 1566.989 kb on - strand, within B158DRAFT_1512 at 1566.989 kb on - strand, within B158DRAFT_1512 at 1566.989 kb on - strand, within B158DRAFT_1512 at 1566.989 kb on - strand, within B158DRAFT_1512 at 1566.989 kb on - strand, within B158DRAFT_1512 at 1566.999 kb on - strand, within B158DRAFT_1512 at 1567.091 kb on - strand, within B158DRAFT_1512 at 1567.114 kb on - strand, within B158DRAFT_1512 at 1567.140 kb on + strand at 1567.148 kb on + strand at 1567.293 kb on - strand at 1567.305 kb on + strand at 1567.313 kb on - strand at 1567.358 kb on - strand at 1567.358 kb on - strand at 1567.372 kb on + strand at 1567.452 kb on - strand at 1567.475 kb on - strand at 1567.477 kb on + strand at 1567.482 kb on + strand at 1567.482 kb on + strand at 1567.482 kb on + strand at 1567.482 kb on + strand at 1567.490 kb on + strand, within B158DRAFT_1514 at 1567.490 kb on - strand, within B158DRAFT_1514 at 1567.490 kb on - strand, within B158DRAFT_1514 at 1567.490 kb on - strand, within B158DRAFT_1514 at 1567.562 kb on - strand, within B158DRAFT_1514 at 1567.562 kb on - strand, within B158DRAFT_1514 at 1567.562 kb on - strand, within B158DRAFT_1514 at 1567.562 kb on - strand, within B158DRAFT_1514 at 1567.562 kb on - strand, within B158DRAFT_1514 at 1567.569 kb on + strand, within B158DRAFT_1514 at 1567.572 kb on - strand, within B158DRAFT_1514 at 1567.572 kb on - strand, within B158DRAFT_1514 at 1567.598 kb on - strand, within B158DRAFT_1514 at 1567.626 kb on + strand, within B158DRAFT_1514 at 1567.723 kb on - strand, within B158DRAFT_1514 at 1567.793 kb on + strand, within B158DRAFT_1514 at 1567.793 kb on + strand, within B158DRAFT_1514 at 1567.798 kb on + strand, within B158DRAFT_1514 at 1567.798 kb on + strand, within B158DRAFT_1514 at 1567.803 kb on - strand, within B158DRAFT_1514 at 1567.835 kb on - strand, within B158DRAFT_1514 at 1567.916 kb on + strand, within B158DRAFT_1514 at 1567.916 kb on + strand, within B158DRAFT_1514 at 1567.916 kb on + strand, within B158DRAFT_1514 at 1567.924 kb on - strand, within B158DRAFT_1514 at 1567.924 kb on - strand, within B158DRAFT_1514 at 1567.990 kb on + strand, within B158DRAFT_1514 at 1568.051 kb on + strand at 1568.052 kb on + strand at 1568.052 kb on + strand at 1568.070 kb on - strand at 1568.142 kb on + strand at 1568.152 kb on + strand at 1568.166 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Gentamicin 0.3 mg/ml remove 1,565,704 + B158DRAFT_1510 0.60 -0.4 1,565,704 + B158DRAFT_1510 0.60 +0.4 1,565,820 + B158DRAFT_1510 0.72 +1.0 1,565,851 - B158DRAFT_1510 0.75 -0.6 1,565,876 + B158DRAFT_1510 0.77 -0.0 1,565,884 - B158DRAFT_1510 0.78 +1.1 1,565,922 + B158DRAFT_1510 0.82 -0.6 1,565,924 + B158DRAFT_1510 0.82 -0.6 1,565,942 - B158DRAFT_1510 0.84 -1.5 1,565,958 - B158DRAFT_1510 0.85 -0.3 1,565,972 + B158DRAFT_1510 0.87 +0.6 1,566,075 - +0.1 1,566,075 - +0.9 1,566,075 - +0.3 1,566,084 + -0.4 1,566,092 - +0.2 1,566,092 - +0.1 1,566,101 - +0.3 1,566,109 + +0.6 1,566,117 - +1.2 1,566,155 - -0.7 1,566,211 + B158DRAFT_1511 0.16 +0.0 1,566,211 + B158DRAFT_1511 0.16 -0.4 1,566,219 - B158DRAFT_1511 0.17 -0.2 1,566,224 + B158DRAFT_1511 0.18 +0.2 1,566,225 - B158DRAFT_1511 0.18 +0.1 1,566,233 - B158DRAFT_1511 0.20 +0.7 1,566,239 + B158DRAFT_1511 0.21 +0.2 1,566,239 + B158DRAFT_1511 0.21 +0.1 1,566,239 + B158DRAFT_1511 0.21 -0.2 1,566,247 - B158DRAFT_1511 0.22 +0.1 1,566,247 - B158DRAFT_1511 0.22 -1.7 1,566,341 - B158DRAFT_1511 0.39 -0.1 1,566,353 + B158DRAFT_1511 0.41 +0.5 1,566,361 - B158DRAFT_1511 0.42 +0.6 1,566,361 - B158DRAFT_1511 0.42 +0.1 1,566,361 - B158DRAFT_1511 0.42 -1.9 1,566,361 - B158DRAFT_1511 0.42 +0.0 1,566,401 - B158DRAFT_1511 0.49 -0.4 1,566,463 - B158DRAFT_1511 0.60 -0.9 1,566,475 + B158DRAFT_1511 0.62 +0.3 1,566,478 + B158DRAFT_1511 0.63 -0.6 1,566,478 - B158DRAFT_1511 0.63 -0.9 1,566,530 + B158DRAFT_1511 0.72 +0.7 1,566,538 - B158DRAFT_1511 0.73 +0.6 1,566,543 - B158DRAFT_1511 0.74 +1.2 1,566,548 + B158DRAFT_1511 0.75 +0.0 1,566,593 + B158DRAFT_1511 0.83 +0.2 1,566,594 + B158DRAFT_1511 0.83 -0.4 1,566,602 - B158DRAFT_1511 0.84 +0.1 1,566,602 - B158DRAFT_1511 0.84 -0.3 1,566,622 + B158DRAFT_1511 0.88 +0.3 1,566,632 + B158DRAFT_1511 0.90 +0.7 1,566,640 - -0.2 1,566,640 - -0.3 1,566,762 - B158DRAFT_1512 0.14 -0.1 1,566,825 - B158DRAFT_1512 0.27 -0.8 1,566,884 + B158DRAFT_1512 0.39 -0.1 1,566,892 - B158DRAFT_1512 0.41 -1.1 1,566,894 + B158DRAFT_1512 0.42 +1.1 1,566,902 - B158DRAFT_1512 0.43 +0.3 1,566,904 + B158DRAFT_1512 0.44 +0.1 1,566,942 + B158DRAFT_1512 0.52 -0.4 1,566,981 + B158DRAFT_1512 0.60 +0.2 1,566,981 + B158DRAFT_1512 0.60 -1.9 1,566,981 + B158DRAFT_1512 0.60 -0.0 1,566,981 + B158DRAFT_1512 0.60 -0.7 1,566,981 + B158DRAFT_1512 0.60 -1.1 1,566,981 + B158DRAFT_1512 0.60 -0.5 1,566,981 + B158DRAFT_1512 0.60 +0.2 1,566,981 + B158DRAFT_1512 0.60 -0.2 1,566,981 + B158DRAFT_1512 0.60 +0.3 1,566,981 + B158DRAFT_1512 0.60 -0.2 1,566,981 + B158DRAFT_1512 0.60 -2.5 1,566,981 + B158DRAFT_1512 0.60 -0.3 1,566,981 + B158DRAFT_1512 0.60 +0.4 1,566,981 + B158DRAFT_1512 0.60 +0.0 1,566,981 + B158DRAFT_1512 0.60 +0.5 1,566,981 + B158DRAFT_1512 0.60 +0.1 1,566,981 + B158DRAFT_1512 0.60 -4.1 1,566,989 - B158DRAFT_1512 0.62 -0.8 1,566,989 - B158DRAFT_1512 0.62 -4.2 1,566,989 - B158DRAFT_1512 0.62 -0.7 1,566,989 - B158DRAFT_1512 0.62 +0.2 1,566,989 - B158DRAFT_1512 0.62 -0.3 1,566,989 - B158DRAFT_1512 0.62 -0.2 1,566,989 - B158DRAFT_1512 0.62 +0.1 1,566,989 - B158DRAFT_1512 0.62 +1.2 1,566,989 - B158DRAFT_1512 0.62 -0.3 1,566,989 - B158DRAFT_1512 0.62 -1.1 1,566,989 - B158DRAFT_1512 0.62 -0.4 1,566,999 - B158DRAFT_1512 0.64 -1.5 1,567,091 - B158DRAFT_1512 0.83 +0.1 1,567,114 - B158DRAFT_1512 0.88 -0.5 1,567,140 + -0.8 1,567,148 + +1.1 1,567,293 - -0.1 1,567,305 + -0.9 1,567,313 - -0.1 1,567,358 - -0.0 1,567,358 - +0.5 1,567,372 + -1.9 1,567,452 - +0.2 1,567,475 - -0.3 1,567,477 + +1.2 1,567,482 + +0.3 1,567,482 + -0.3 1,567,482 + -0.2 1,567,482 + -1.3 1,567,490 + B158DRAFT_1514 0.10 -1.8 1,567,490 - B158DRAFT_1514 0.10 -1.3 1,567,490 - B158DRAFT_1514 0.10 +0.1 1,567,490 - B158DRAFT_1514 0.10 +1.1 1,567,562 - B158DRAFT_1514 0.21 +0.1 1,567,562 - B158DRAFT_1514 0.21 +0.1 1,567,562 - B158DRAFT_1514 0.21 +0.3 1,567,562 - B158DRAFT_1514 0.21 -0.6 1,567,562 - B158DRAFT_1514 0.21 -0.6 1,567,569 + B158DRAFT_1514 0.22 -1.3 1,567,572 - B158DRAFT_1514 0.23 -0.8 1,567,572 - B158DRAFT_1514 0.23 -0.7 1,567,598 - B158DRAFT_1514 0.27 +0.2 1,567,626 + B158DRAFT_1514 0.31 -0.3 1,567,723 - B158DRAFT_1514 0.45 -1.7 1,567,793 + B158DRAFT_1514 0.56 +0.2 1,567,793 + B158DRAFT_1514 0.56 -3.9 1,567,798 + B158DRAFT_1514 0.57 -0.8 1,567,798 + B158DRAFT_1514 0.57 -2.1 1,567,803 - B158DRAFT_1514 0.57 -0.3 1,567,835 - B158DRAFT_1514 0.62 +0.1 1,567,916 + B158DRAFT_1514 0.74 +1.9 1,567,916 + B158DRAFT_1514 0.74 +0.4 1,567,916 + B158DRAFT_1514 0.74 -1.0 1,567,924 - B158DRAFT_1514 0.75 +0.7 1,567,924 - B158DRAFT_1514 0.75 +0.4 1,567,990 + B158DRAFT_1514 0.85 -0.0 1,568,051 + +0.3 1,568,052 + +1.0 1,568,052 + +0.2 1,568,070 - -1.3 1,568,142 + -0.2 1,568,152 + -0.8 1,568,166 + +0.5
Or see this region's nucleotide sequence