Experiment: m.b. Gentamicin 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0787 and B158DRAFT_0788 are separated by 90 nucleotides B158DRAFT_0788 and B158DRAFT_0789 are separated by 19 nucleotides B158DRAFT_0789 and B158DRAFT_0790 overlap by 4 nucleotides
B158DRAFT_0787: B158DRAFT_0787 - PilZ domain., at 791,154 to 791,447
_0787
B158DRAFT_0788: B158DRAFT_0788 - dimethyladenosine transferase, at 791,538 to 792,347
_0788
B158DRAFT_0789: B158DRAFT_0789 - 4-hydroxythreonine-4-phosphate dehydrogenase, at 792,367 to 793,365
_0789
B158DRAFT_0790: B158DRAFT_0790 - periplasmic chaperone for outer membrane proteins SurA, at 793,362 to 794,645
_0790
Position (kb) 792
793
794 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 791.384 kb on + strand, within B158DRAFT_0787 at 791.384 kb on + strand, within B158DRAFT_0787 at 791.384 kb on + strand, within B158DRAFT_0787 at 791.384 kb on + strand, within B158DRAFT_0787 at 791.434 kb on + strand at 791.442 kb on - strand at 791.503 kb on + strand at 791.511 kb on - strand at 791.571 kb on + strand at 791.579 kb on - strand at 791.595 kb on + strand at 791.595 kb on + strand at 791.605 kb on + strand at 791.608 kb on - strand at 791.618 kb on + strand at 791.633 kb on + strand, within B158DRAFT_0788 at 791.680 kb on + strand, within B158DRAFT_0788 at 791.703 kb on + strand, within B158DRAFT_0788 at 791.727 kb on + strand, within B158DRAFT_0788 at 791.745 kb on + strand, within B158DRAFT_0788 at 791.758 kb on - strand, within B158DRAFT_0788 at 791.763 kb on - strand, within B158DRAFT_0788 at 791.779 kb on - strand, within B158DRAFT_0788 at 791.779 kb on - strand, within B158DRAFT_0788 at 791.813 kb on - strand, within B158DRAFT_0788 at 791.832 kb on - strand, within B158DRAFT_0788 at 791.889 kb on + strand, within B158DRAFT_0788 at 791.897 kb on + strand, within B158DRAFT_0788 at 791.905 kb on - strand, within B158DRAFT_0788 at 791.915 kb on - strand, within B158DRAFT_0788 at 791.955 kb on + strand, within B158DRAFT_0788 at 791.999 kb on - strand, within B158DRAFT_0788 at 792.006 kb on + strand, within B158DRAFT_0788 at 792.030 kb on - strand, within B158DRAFT_0788 at 792.030 kb on - strand, within B158DRAFT_0788 at 792.030 kb on - strand, within B158DRAFT_0788 at 792.030 kb on - strand, within B158DRAFT_0788 at 792.085 kb on + strand, within B158DRAFT_0788 at 792.136 kb on + strand, within B158DRAFT_0788 at 792.169 kb on + strand, within B158DRAFT_0788 at 792.177 kb on - strand, within B158DRAFT_0788 at 792.205 kb on - strand, within B158DRAFT_0788 at 792.211 kb on - strand, within B158DRAFT_0788 at 792.254 kb on + strand, within B158DRAFT_0788 at 792.268 kb on + strand at 792.312 kb on + strand at 792.322 kb on + strand at 792.322 kb on + strand at 792.329 kb on - strand at 792.388 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Gentamicin 0.3 mg/ml remove 791,384 + B158DRAFT_0787 0.78 -0.1 791,384 + B158DRAFT_0787 0.78 +0.5 791,384 + B158DRAFT_0787 0.78 -0.8 791,384 + B158DRAFT_0787 0.78 -0.5 791,434 + -0.6 791,442 - +0.3 791,503 + -2.6 791,511 - +0.4 791,571 + -1.0 791,579 - +0.2 791,595 + -1.8 791,595 + -1.9 791,605 + -0.3 791,608 - -0.4 791,618 + -0.3 791,633 + B158DRAFT_0788 0.12 -3.0 791,680 + B158DRAFT_0788 0.18 -0.3 791,703 + B158DRAFT_0788 0.20 -0.7 791,727 + B158DRAFT_0788 0.23 -1.0 791,745 + B158DRAFT_0788 0.26 +0.7 791,758 - B158DRAFT_0788 0.27 -0.8 791,763 - B158DRAFT_0788 0.28 -0.2 791,779 - B158DRAFT_0788 0.30 +0.4 791,779 - B158DRAFT_0788 0.30 +0.6 791,813 - B158DRAFT_0788 0.34 -0.6 791,832 - B158DRAFT_0788 0.36 -0.4 791,889 + B158DRAFT_0788 0.43 -0.4 791,897 + B158DRAFT_0788 0.44 +0.6 791,905 - B158DRAFT_0788 0.45 -2.4 791,915 - B158DRAFT_0788 0.47 -0.5 791,955 + B158DRAFT_0788 0.51 -3.0 791,999 - B158DRAFT_0788 0.57 -3.9 792,006 + B158DRAFT_0788 0.58 -1.0 792,030 - B158DRAFT_0788 0.61 +0.9 792,030 - B158DRAFT_0788 0.61 -0.7 792,030 - B158DRAFT_0788 0.61 -3.8 792,030 - B158DRAFT_0788 0.61 -0.2 792,085 + B158DRAFT_0788 0.68 +0.0 792,136 + B158DRAFT_0788 0.74 -1.1 792,169 + B158DRAFT_0788 0.78 -0.5 792,177 - B158DRAFT_0788 0.79 -2.9 792,205 - B158DRAFT_0788 0.82 -2.0 792,211 - B158DRAFT_0788 0.83 -0.7 792,254 + B158DRAFT_0788 0.88 -1.3 792,268 + -0.6 792,312 + -0.7 792,322 + -0.2 792,322 + +0.6 792,329 - -0.8 792,388 + -2.8
Or see this region's nucleotide sequence