Experiment: m.b. Gentamicin 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0628 and B158DRAFT_0629 overlap by 10 nucleotides B158DRAFT_0629 and B158DRAFT_0630 are separated by 43 nucleotides B158DRAFT_0630 and B158DRAFT_0631 are separated by 82 nucleotides
B158DRAFT_0628: B158DRAFT_0628 - Protein of unknown function (DUF2878)., at 637,160 to 637,726
_0628
B158DRAFT_0629: B158DRAFT_0629 - Predicted membrane protein, at 637,717 to 638,490
_0629
B158DRAFT_0630: B158DRAFT_0630 - Cyclopropane fatty acid synthase and related methyltransferases, at 638,534 to 639,568
_0630
B158DRAFT_0631: B158DRAFT_0631 - Signal transduction histidine kinase, at 639,651 to 640,949
_0631
Position (kb) 638
639
640 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 637.586 kb on + strand, within B158DRAFT_0628 at 637.699 kb on + strand at 637.770 kb on + strand at 637.781 kb on + strand at 637.781 kb on + strand at 637.881 kb on - strand, within B158DRAFT_0629 at 637.933 kb on - strand, within B158DRAFT_0629 at 638.067 kb on - strand, within B158DRAFT_0629 at 638.067 kb on - strand, within B158DRAFT_0629 at 638.067 kb on - strand, within B158DRAFT_0629 at 638.076 kb on + strand, within B158DRAFT_0629 at 638.084 kb on - strand, within B158DRAFT_0629 at 638.140 kb on - strand, within B158DRAFT_0629 at 638.207 kb on - strand, within B158DRAFT_0629 at 638.528 kb on + strand at 638.528 kb on + strand at 638.536 kb on - strand at 638.536 kb on - strand at 638.601 kb on + strand at 638.647 kb on - strand, within B158DRAFT_0630 at 638.654 kb on - strand, within B158DRAFT_0630 at 638.802 kb on - strand, within B158DRAFT_0630 at 638.835 kb on + strand, within B158DRAFT_0630 at 638.933 kb on - strand, within B158DRAFT_0630 at 639.023 kb on - strand, within B158DRAFT_0630 at 639.115 kb on + strand, within B158DRAFT_0630 at 639.145 kb on + strand, within B158DRAFT_0630 at 639.301 kb on - strand, within B158DRAFT_0630 at 639.301 kb on - strand, within B158DRAFT_0630 at 639.372 kb on + strand, within B158DRAFT_0630 at 639.380 kb on - strand, within B158DRAFT_0630 at 639.427 kb on + strand, within B158DRAFT_0630 at 639.427 kb on + strand, within B158DRAFT_0630 at 639.435 kb on - strand, within B158DRAFT_0630 at 639.555 kb on - strand at 639.555 kb on - strand at 639.686 kb on + strand at 639.716 kb on + strand at 639.870 kb on + strand, within B158DRAFT_0631 at 639.878 kb on - strand, within B158DRAFT_0631 at 639.878 kb on - strand, within B158DRAFT_0631 at 640.036 kb on - strand, within B158DRAFT_0631 at 640.126 kb on + strand, within B158DRAFT_0631 at 640.158 kb on + strand, within B158DRAFT_0631 at 640.168 kb on + strand, within B158DRAFT_0631 at 640.168 kb on + strand, within B158DRAFT_0631 at 640.176 kb on - strand, within B158DRAFT_0631 at 640.176 kb on - strand, within B158DRAFT_0631 at 640.176 kb on - strand, within B158DRAFT_0631 at 640.176 kb on - strand, within B158DRAFT_0631 at 640.176 kb on - strand, within B158DRAFT_0631 at 640.176 kb on - strand, within B158DRAFT_0631 at 640.176 kb on - strand, within B158DRAFT_0631 at 640.176 kb on - strand, within B158DRAFT_0631 at 640.176 kb on - strand, within B158DRAFT_0631 at 640.176 kb on - strand, within B158DRAFT_0631 at 640.176 kb on - strand, within B158DRAFT_0631 at 640.176 kb on - strand, within B158DRAFT_0631 at 640.176 kb on - strand, within B158DRAFT_0631 at 640.176 kb on - strand, within B158DRAFT_0631 at 640.176 kb on - strand, within B158DRAFT_0631 at 640.258 kb on + strand, within B158DRAFT_0631 at 640.287 kb on - strand, within B158DRAFT_0631
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Gentamicin 0.3 mg/ml remove 637,586 + B158DRAFT_0628 0.75 -0.1 637,699 + -0.6 637,770 + +0.3 637,781 + -0.1 637,781 + +0.1 637,881 - B158DRAFT_0629 0.21 +0.3 637,933 - B158DRAFT_0629 0.28 +0.0 638,067 - B158DRAFT_0629 0.45 +0.7 638,067 - B158DRAFT_0629 0.45 -1.4 638,067 - B158DRAFT_0629 0.45 +1.8 638,076 + B158DRAFT_0629 0.46 -0.2 638,084 - B158DRAFT_0629 0.47 +0.0 638,140 - B158DRAFT_0629 0.55 +1.0 638,207 - B158DRAFT_0629 0.63 +0.2 638,528 + +0.1 638,528 + -2.3 638,536 - -0.5 638,536 - -0.9 638,601 + +0.2 638,647 - B158DRAFT_0630 0.11 +0.1 638,654 - B158DRAFT_0630 0.12 +1.2 638,802 - B158DRAFT_0630 0.26 +0.3 638,835 + B158DRAFT_0630 0.29 +0.4 638,933 - B158DRAFT_0630 0.39 -0.6 639,023 - B158DRAFT_0630 0.47 -1.9 639,115 + B158DRAFT_0630 0.56 -2.0 639,145 + B158DRAFT_0630 0.59 -0.2 639,301 - B158DRAFT_0630 0.74 -0.2 639,301 - B158DRAFT_0630 0.74 +0.1 639,372 + B158DRAFT_0630 0.81 +0.0 639,380 - B158DRAFT_0630 0.82 -0.1 639,427 + B158DRAFT_0630 0.86 -0.1 639,427 + B158DRAFT_0630 0.86 +0.1 639,435 - B158DRAFT_0630 0.87 -1.9 639,555 - -0.9 639,555 - -1.5 639,686 + +1.6 639,716 + +0.0 639,870 + B158DRAFT_0631 0.17 +0.9 639,878 - B158DRAFT_0631 0.17 -0.6 639,878 - B158DRAFT_0631 0.17 +0.2 640,036 - B158DRAFT_0631 0.30 -0.2 640,126 + B158DRAFT_0631 0.37 +0.5 640,158 + B158DRAFT_0631 0.39 +0.9 640,168 + B158DRAFT_0631 0.40 +0.2 640,168 + B158DRAFT_0631 0.40 +0.4 640,176 - B158DRAFT_0631 0.40 +0.5 640,176 - B158DRAFT_0631 0.40 +0.3 640,176 - B158DRAFT_0631 0.40 +0.2 640,176 - B158DRAFT_0631 0.40 -0.5 640,176 - B158DRAFT_0631 0.40 +1.0 640,176 - B158DRAFT_0631 0.40 +0.9 640,176 - B158DRAFT_0631 0.40 +0.0 640,176 - B158DRAFT_0631 0.40 -1.3 640,176 - B158DRAFT_0631 0.40 +0.2 640,176 - B158DRAFT_0631 0.40 +0.1 640,176 - B158DRAFT_0631 0.40 -1.0 640,176 - B158DRAFT_0631 0.40 -0.0 640,176 - B158DRAFT_0631 0.40 +0.0 640,176 - B158DRAFT_0631 0.40 -4.2 640,176 - B158DRAFT_0631 0.40 -0.0 640,258 + B158DRAFT_0631 0.47 +2.1 640,287 - B158DRAFT_0631 0.49 +0.4
Or see this region's nucleotide sequence