Experiment: m.b. Gentamicin 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0098 and B158DRAFT_0099 are separated by 51 nucleotides B158DRAFT_0099 and B158DRAFT_0100 are separated by 149 nucleotides
B158DRAFT_0098: B158DRAFT_0098 - Phosphate starvation-inducible protein PhoH, predicted ATPase, at 91,378 to 92,418
_0098
B158DRAFT_0099: B158DRAFT_0099 - tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB, at 92,470 to 93,810
_0099
B158DRAFT_0100: B158DRAFT_0100 - Na+/proline symporter, at 93,960 to 95,360
_0100
Position (kb)
92
93
94 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 91.581 kb on - strand, within B158DRAFT_0098 at 91.581 kb on - strand, within B158DRAFT_0098 at 91.588 kb on - strand, within B158DRAFT_0098 at 91.619 kb on - strand, within B158DRAFT_0098 at 91.685 kb on - strand, within B158DRAFT_0098 at 91.685 kb on - strand, within B158DRAFT_0098 at 91.690 kb on - strand, within B158DRAFT_0098 at 91.698 kb on - strand, within B158DRAFT_0098 at 91.891 kb on - strand, within B158DRAFT_0098 at 92.259 kb on - strand, within B158DRAFT_0098 at 92.332 kb on - strand at 92.332 kb on - strand at 92.340 kb on - strand at 92.376 kb on - strand at 92.417 kb on - strand at 92.427 kb on - strand at 92.434 kb on - strand at 92.546 kb on - strand at 92.666 kb on - strand, within B158DRAFT_0099 at 92.666 kb on - strand, within B158DRAFT_0099 at 92.666 kb on - strand, within B158DRAFT_0099 at 92.671 kb on - strand, within B158DRAFT_0099 at 92.671 kb on - strand, within B158DRAFT_0099 at 92.671 kb on - strand, within B158DRAFT_0099 at 92.795 kb on - strand, within B158DRAFT_0099 at 92.795 kb on - strand, within B158DRAFT_0099 at 92.807 kb on - strand, within B158DRAFT_0099 at 92.983 kb on - strand, within B158DRAFT_0099 at 92.983 kb on - strand, within B158DRAFT_0099 at 92.983 kb on - strand, within B158DRAFT_0099 at 93.015 kb on - strand, within B158DRAFT_0099 at 93.015 kb on - strand, within B158DRAFT_0099 at 93.030 kb on - strand, within B158DRAFT_0099 at 93.071 kb on - strand, within B158DRAFT_0099 at 93.174 kb on - strand, within B158DRAFT_0099 at 93.174 kb on - strand, within B158DRAFT_0099 at 93.198 kb on - strand, within B158DRAFT_0099 at 93.299 kb on - strand, within B158DRAFT_0099 at 93.312 kb on - strand, within B158DRAFT_0099 at 93.315 kb on - strand, within B158DRAFT_0099 at 93.588 kb on - strand, within B158DRAFT_0099 at 93.588 kb on - strand, within B158DRAFT_0099 at 93.883 kb on - strand at 93.883 kb on - strand at 93.883 kb on - strand at 93.883 kb on - strand at 93.883 kb on - strand at 93.893 kb on - strand at 93.932 kb on + strand at 93.940 kb on - strand at 94.013 kb on - strand at 94.020 kb on + strand at 94.064 kb on - strand at 94.108 kb on + strand, within B158DRAFT_0100 at 94.116 kb on - strand, within B158DRAFT_0100 at 94.119 kb on + strand, within B158DRAFT_0100 at 94.119 kb on + strand, within B158DRAFT_0100 at 94.127 kb on - strand, within B158DRAFT_0100 at 94.175 kb on + strand, within B158DRAFT_0100 at 94.184 kb on + strand, within B158DRAFT_0100 at 94.222 kb on - strand, within B158DRAFT_0100 at 94.222 kb on - strand, within B158DRAFT_0100 at 94.228 kb on - strand, within B158DRAFT_0100 at 94.229 kb on - strand, within B158DRAFT_0100 at 94.229 kb on - strand, within B158DRAFT_0100 at 94.231 kb on + strand, within B158DRAFT_0100 at 94.231 kb on + strand, within B158DRAFT_0100 at 94.239 kb on - strand, within B158DRAFT_0100 at 94.239 kb on - strand, within B158DRAFT_0100 at 94.239 kb on - strand, within B158DRAFT_0100 at 94.244 kb on + strand, within B158DRAFT_0100 at 94.274 kb on + strand, within B158DRAFT_0100 at 94.289 kb on - strand, within B158DRAFT_0100 at 94.327 kb on - strand, within B158DRAFT_0100 at 94.338 kb on - strand, within B158DRAFT_0100 at 94.532 kb on - strand, within B158DRAFT_0100 at 94.545 kb on + strand, within B158DRAFT_0100 at 94.558 kb on + strand, within B158DRAFT_0100 at 94.566 kb on - strand, within B158DRAFT_0100 at 94.576 kb on - strand, within B158DRAFT_0100 at 94.583 kb on + strand, within B158DRAFT_0100 at 94.591 kb on - strand, within B158DRAFT_0100 at 94.591 kb on - strand, within B158DRAFT_0100 at 94.591 kb on - strand, within B158DRAFT_0100 at 94.591 kb on - strand, within B158DRAFT_0100 at 94.601 kb on + strand, within B158DRAFT_0100 at 94.626 kb on - strand, within B158DRAFT_0100 at 94.630 kb on - strand, within B158DRAFT_0100 at 94.707 kb on - strand, within B158DRAFT_0100 at 94.733 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.751 kb on - strand, within B158DRAFT_0100
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Gentamicin 0.3 mg/ml remove 91,581 - B158DRAFT_0098 0.20 +0.7 91,581 - B158DRAFT_0098 0.20 +0.3 91,588 - B158DRAFT_0098 0.20 -2.0 91,619 - B158DRAFT_0098 0.23 +0.3 91,685 - B158DRAFT_0098 0.29 -0.0 91,685 - B158DRAFT_0098 0.29 -0.1 91,690 - B158DRAFT_0098 0.30 -0.4 91,698 - B158DRAFT_0098 0.31 -0.1 91,891 - B158DRAFT_0098 0.49 +0.0 92,259 - B158DRAFT_0098 0.85 +0.0 92,332 - -0.7 92,332 - +0.3 92,340 - +0.5 92,376 - -2.2 92,417 - -0.5 92,427 - -1.3 92,434 - -0.2 92,546 - -0.2 92,666 - B158DRAFT_0099 0.15 -0.8 92,666 - B158DRAFT_0099 0.15 -0.7 92,666 - B158DRAFT_0099 0.15 -0.2 92,671 - B158DRAFT_0099 0.15 +0.5 92,671 - B158DRAFT_0099 0.15 -3.3 92,671 - B158DRAFT_0099 0.15 -0.0 92,795 - B158DRAFT_0099 0.24 -0.1 92,795 - B158DRAFT_0099 0.24 +0.3 92,807 - B158DRAFT_0099 0.25 -4.5 92,983 - B158DRAFT_0099 0.38 -0.9 92,983 - B158DRAFT_0099 0.38 -0.3 92,983 - B158DRAFT_0099 0.38 +0.1 93,015 - B158DRAFT_0099 0.41 -0.2 93,015 - B158DRAFT_0099 0.41 -0.3 93,030 - B158DRAFT_0099 0.42 -0.2 93,071 - B158DRAFT_0099 0.45 -1.9 93,174 - B158DRAFT_0099 0.52 +0.1 93,174 - B158DRAFT_0099 0.52 -1.3 93,198 - B158DRAFT_0099 0.54 -2.5 93,299 - B158DRAFT_0099 0.62 -1.3 93,312 - B158DRAFT_0099 0.63 +0.3 93,315 - B158DRAFT_0099 0.63 -3.2 93,588 - B158DRAFT_0099 0.83 -0.9 93,588 - B158DRAFT_0099 0.83 -1.0 93,883 - +0.7 93,883 - +0.0 93,883 - +0.0 93,883 - -0.7 93,883 - -0.1 93,893 - -0.1 93,932 + -0.9 93,940 - -0.8 94,013 - +0.1 94,020 + -1.3 94,064 - -0.3 94,108 + B158DRAFT_0100 0.11 -0.4 94,116 - B158DRAFT_0100 0.11 +0.5 94,119 + B158DRAFT_0100 0.11 +0.5 94,119 + B158DRAFT_0100 0.11 -0.4 94,127 - B158DRAFT_0100 0.12 +0.1 94,175 + B158DRAFT_0100 0.15 -0.1 94,184 + B158DRAFT_0100 0.16 -0.3 94,222 - B158DRAFT_0100 0.19 -1.8 94,222 - B158DRAFT_0100 0.19 -0.2 94,228 - B158DRAFT_0100 0.19 +0.1 94,229 - B158DRAFT_0100 0.19 +0.5 94,229 - B158DRAFT_0100 0.19 -0.2 94,231 + B158DRAFT_0100 0.19 +0.7 94,231 + B158DRAFT_0100 0.19 +0.5 94,239 - B158DRAFT_0100 0.20 -0.0 94,239 - B158DRAFT_0100 0.20 +0.4 94,239 - B158DRAFT_0100 0.20 -1.5 94,244 + B158DRAFT_0100 0.20 -0.3 94,274 + B158DRAFT_0100 0.22 -0.3 94,289 - B158DRAFT_0100 0.23 -0.1 94,327 - B158DRAFT_0100 0.26 +0.6 94,338 - B158DRAFT_0100 0.27 -0.9 94,532 - B158DRAFT_0100 0.41 +0.2 94,545 + B158DRAFT_0100 0.42 -1.6 94,558 + B158DRAFT_0100 0.43 -0.1 94,566 - B158DRAFT_0100 0.43 +0.5 94,576 - B158DRAFT_0100 0.44 -3.4 94,583 + B158DRAFT_0100 0.44 -1.5 94,591 - B158DRAFT_0100 0.45 -0.5 94,591 - B158DRAFT_0100 0.45 -0.6 94,591 - B158DRAFT_0100 0.45 +1.3 94,591 - B158DRAFT_0100 0.45 -0.2 94,601 + B158DRAFT_0100 0.46 +0.3 94,626 - B158DRAFT_0100 0.48 +0.1 94,630 - B158DRAFT_0100 0.48 +0.7 94,707 - B158DRAFT_0100 0.53 -0.3 94,733 + B158DRAFT_0100 0.55 -0.6 94,743 + B158DRAFT_0100 0.56 -0.8 94,743 + B158DRAFT_0100 0.56 -0.5 94,743 + B158DRAFT_0100 0.56 -1.1 94,743 + B158DRAFT_0100 0.56 +0.0 94,743 + B158DRAFT_0100 0.56 +0.7 94,743 + B158DRAFT_0100 0.56 +0.1 94,743 + B158DRAFT_0100 0.56 -3.3 94,743 + B158DRAFT_0100 0.56 -0.3 94,751 - B158DRAFT_0100 0.56 -0.1
Or see this region's nucleotide sequence