Experiment: m.b. sodium fluoride 30 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1339 and B158DRAFT_1340 are separated by 130 nucleotides B158DRAFT_1340 and B158DRAFT_1341 overlap by 8 nucleotides
B158DRAFT_1339: B158DRAFT_1339 - L-serine dehydratase, iron-sulfur-dependent, single chain form, at 1,380,566 to 1,381,939
_1339
B158DRAFT_1340: B158DRAFT_1340 - NTP pyrophosphohydrolases including oxidative damage repair enzymes, at 1,382,070 to 1,382,633
_1340
B158DRAFT_1341: B158DRAFT_1341 - aminodeoxychorismate synthase, component I, bacterial clade, at 1,382,626 to 1,384,044
_1341
Position (kb)
1382
1383 Strain fitness (log2 ratio)
-1
0
1 at 1381.073 kb on + strand, within B158DRAFT_1339 at 1381.135 kb on + strand, within B158DRAFT_1339 at 1381.135 kb on + strand, within B158DRAFT_1339 at 1381.135 kb on + strand, within B158DRAFT_1339 at 1381.135 kb on + strand, within B158DRAFT_1339 at 1381.135 kb on + strand, within B158DRAFT_1339 at 1381.135 kb on + strand, within B158DRAFT_1339 at 1381.135 kb on + strand, within B158DRAFT_1339 at 1381.143 kb on - strand, within B158DRAFT_1339 at 1381.143 kb on - strand, within B158DRAFT_1339 at 1381.143 kb on - strand, within B158DRAFT_1339 at 1381.143 kb on - strand, within B158DRAFT_1339 at 1381.143 kb on - strand, within B158DRAFT_1339 at 1381.143 kb on - strand, within B158DRAFT_1339 at 1381.143 kb on - strand, within B158DRAFT_1339 at 1381.143 kb on - strand, within B158DRAFT_1339 at 1381.153 kb on - strand, within B158DRAFT_1339 at 1381.222 kb on + strand, within B158DRAFT_1339 at 1381.282 kb on - strand, within B158DRAFT_1339 at 1381.402 kb on - strand, within B158DRAFT_1339 at 1381.410 kb on + strand, within B158DRAFT_1339 at 1381.741 kb on - strand, within B158DRAFT_1339 at 1381.761 kb on + strand, within B158DRAFT_1339 at 1381.762 kb on - strand, within B158DRAFT_1339 at 1381.762 kb on - strand, within B158DRAFT_1339 at 1381.774 kb on + strand, within B158DRAFT_1339 at 1381.854 kb on - strand at 1381.854 kb on - strand at 1381.868 kb on + strand at 1381.873 kb on + strand at 1381.873 kb on + strand at 1381.873 kb on + strand at 1381.873 kb on + strand at 1381.881 kb on - strand at 1381.881 kb on - strand at 1381.881 kb on - strand at 1381.881 kb on - strand at 1381.881 kb on - strand at 1381.881 kb on - strand at 1381.892 kb on + strand at 1381.892 kb on + strand at 1381.898 kb on + strand at 1381.916 kb on - strand at 1381.990 kb on + strand at 1382.000 kb on + strand at 1382.003 kb on - strand at 1382.068 kb on + strand at 1382.068 kb on + strand at 1382.075 kb on - strand at 1382.077 kb on - strand at 1382.077 kb on - strand at 1382.138 kb on + strand, within B158DRAFT_1340 at 1382.166 kb on + strand, within B158DRAFT_1340 at 1382.199 kb on - strand, within B158DRAFT_1340 at 1382.204 kb on - strand, within B158DRAFT_1340 at 1382.242 kb on - strand, within B158DRAFT_1340 at 1382.267 kb on + strand, within B158DRAFT_1340 at 1382.299 kb on + strand, within B158DRAFT_1340 at 1382.300 kb on + strand, within B158DRAFT_1340 at 1382.382 kb on - strand, within B158DRAFT_1340 at 1382.395 kb on + strand, within B158DRAFT_1340 at 1382.395 kb on + strand, within B158DRAFT_1340 at 1382.400 kb on + strand, within B158DRAFT_1340 at 1382.403 kb on - strand, within B158DRAFT_1340 at 1382.405 kb on + strand, within B158DRAFT_1340 at 1382.405 kb on + strand, within B158DRAFT_1340 at 1382.405 kb on + strand, within B158DRAFT_1340 at 1382.405 kb on + strand, within B158DRAFT_1340 at 1382.408 kb on - strand, within B158DRAFT_1340 at 1382.410 kb on + strand, within B158DRAFT_1340 at 1382.413 kb on - strand, within B158DRAFT_1340 at 1382.413 kb on - strand, within B158DRAFT_1340 at 1382.418 kb on - strand, within B158DRAFT_1340 at 1382.460 kb on + strand, within B158DRAFT_1340 at 1382.460 kb on + strand, within B158DRAFT_1340 at 1382.503 kb on + strand, within B158DRAFT_1340 at 1382.503 kb on + strand, within B158DRAFT_1340 at 1382.556 kb on + strand, within B158DRAFT_1340 at 1382.558 kb on + strand, within B158DRAFT_1340 at 1382.558 kb on + strand, within B158DRAFT_1340 at 1382.598 kb on + strand at 1382.604 kb on + strand at 1382.609 kb on + strand at 1382.612 kb on - strand at 1382.614 kb on + strand at 1382.644 kb on + strand at 1382.645 kb on + strand at 1382.653 kb on - strand at 1382.701 kb on - strand at 1382.707 kb on + strand at 1382.715 kb on - strand at 1382.715 kb on - strand at 1382.758 kb on + strand at 1382.803 kb on + strand, within B158DRAFT_1341 at 1382.803 kb on + strand, within B158DRAFT_1341 at 1382.803 kb on + strand, within B158DRAFT_1341 at 1382.808 kb on + strand, within B158DRAFT_1341 at 1382.816 kb on - strand, within B158DRAFT_1341 at 1382.823 kb on + strand, within B158DRAFT_1341 at 1382.834 kb on - strand, within B158DRAFT_1341 at 1382.859 kb on + strand, within B158DRAFT_1341 at 1382.867 kb on - strand, within B158DRAFT_1341 at 1382.872 kb on + strand, within B158DRAFT_1341 at 1382.872 kb on + strand, within B158DRAFT_1341 at 1382.872 kb on + strand, within B158DRAFT_1341 at 1382.880 kb on - strand, within B158DRAFT_1341 at 1382.880 kb on - strand, within B158DRAFT_1341 at 1382.963 kb on + strand, within B158DRAFT_1341 at 1382.994 kb on - strand, within B158DRAFT_1341 at 1383.380 kb on - strand, within B158DRAFT_1341 at 1383.395 kb on - strand, within B158DRAFT_1341 at 1383.417 kb on + strand, within B158DRAFT_1341 at 1383.417 kb on + strand, within B158DRAFT_1341 at 1383.422 kb on + strand, within B158DRAFT_1341 at 1383.425 kb on - strand, within B158DRAFT_1341 at 1383.430 kb on - strand, within B158DRAFT_1341
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 30 mM remove 1,381,073 + B158DRAFT_1339 0.37 -1.0 1,381,135 + B158DRAFT_1339 0.41 -0.8 1,381,135 + B158DRAFT_1339 0.41 -1.7 1,381,135 + B158DRAFT_1339 0.41 -0.1 1,381,135 + B158DRAFT_1339 0.41 -1.1 1,381,135 + B158DRAFT_1339 0.41 -0.1 1,381,135 + B158DRAFT_1339 0.41 +0.4 1,381,135 + B158DRAFT_1339 0.41 +0.3 1,381,143 - B158DRAFT_1339 0.42 -1.0 1,381,143 - B158DRAFT_1339 0.42 -0.3 1,381,143 - B158DRAFT_1339 0.42 -0.2 1,381,143 - B158DRAFT_1339 0.42 -0.6 1,381,143 - B158DRAFT_1339 0.42 -0.9 1,381,143 - B158DRAFT_1339 0.42 -0.7 1,381,143 - B158DRAFT_1339 0.42 -0.0 1,381,143 - B158DRAFT_1339 0.42 -0.7 1,381,153 - B158DRAFT_1339 0.43 -0.2 1,381,222 + B158DRAFT_1339 0.48 -0.2 1,381,282 - B158DRAFT_1339 0.52 -0.3 1,381,402 - B158DRAFT_1339 0.61 -0.4 1,381,410 + B158DRAFT_1339 0.61 -0.6 1,381,741 - B158DRAFT_1339 0.86 -0.3 1,381,761 + B158DRAFT_1339 0.87 -0.5 1,381,762 - B158DRAFT_1339 0.87 +0.3 1,381,762 - B158DRAFT_1339 0.87 -0.1 1,381,774 + B158DRAFT_1339 0.88 -0.6 1,381,854 - -0.6 1,381,854 - -0.9 1,381,868 + -0.2 1,381,873 + -0.1 1,381,873 + -1.2 1,381,873 + -0.7 1,381,873 + -0.1 1,381,881 - -0.3 1,381,881 - -0.1 1,381,881 - -1.1 1,381,881 - -0.4 1,381,881 - -0.7 1,381,881 - -0.2 1,381,892 + -0.1 1,381,892 + -0.7 1,381,898 + -0.5 1,381,916 - -0.6 1,381,990 + -0.4 1,382,000 + +0.1 1,382,003 - +0.3 1,382,068 + -0.0 1,382,068 + -0.3 1,382,075 - -0.0 1,382,077 - -0.4 1,382,077 - +0.2 1,382,138 + B158DRAFT_1340 0.12 +0.2 1,382,166 + B158DRAFT_1340 0.17 +0.7 1,382,199 - B158DRAFT_1340 0.23 -0.2 1,382,204 - B158DRAFT_1340 0.24 -0.0 1,382,242 - B158DRAFT_1340 0.30 -0.2 1,382,267 + B158DRAFT_1340 0.35 -0.4 1,382,299 + B158DRAFT_1340 0.41 -0.1 1,382,300 + B158DRAFT_1340 0.41 +0.6 1,382,382 - B158DRAFT_1340 0.55 -0.2 1,382,395 + B158DRAFT_1340 0.58 +0.3 1,382,395 + B158DRAFT_1340 0.58 +0.1 1,382,400 + B158DRAFT_1340 0.59 +0.3 1,382,403 - B158DRAFT_1340 0.59 -0.3 1,382,405 + B158DRAFT_1340 0.59 +0.1 1,382,405 + B158DRAFT_1340 0.59 -0.1 1,382,405 + B158DRAFT_1340 0.59 -0.9 1,382,405 + B158DRAFT_1340 0.59 +0.2 1,382,408 - B158DRAFT_1340 0.60 -0.5 1,382,410 + B158DRAFT_1340 0.60 +0.2 1,382,413 - B158DRAFT_1340 0.61 -0.4 1,382,413 - B158DRAFT_1340 0.61 +0.4 1,382,418 - B158DRAFT_1340 0.62 +0.3 1,382,460 + B158DRAFT_1340 0.69 -1.1 1,382,460 + B158DRAFT_1340 0.69 -1.0 1,382,503 + B158DRAFT_1340 0.77 +0.1 1,382,503 + B158DRAFT_1340 0.77 -0.6 1,382,556 + B158DRAFT_1340 0.86 -1.4 1,382,558 + B158DRAFT_1340 0.87 -0.0 1,382,558 + B158DRAFT_1340 0.87 -0.0 1,382,598 + -0.1 1,382,604 + -0.1 1,382,609 + +0.0 1,382,612 - -0.2 1,382,614 + +0.0 1,382,644 + -1.0 1,382,645 + -0.5 1,382,653 - -0.8 1,382,701 - -0.7 1,382,707 + +0.1 1,382,715 - -0.3 1,382,715 - +0.1 1,382,758 + +0.3 1,382,803 + B158DRAFT_1341 0.12 -0.2 1,382,803 + B158DRAFT_1341 0.12 +0.6 1,382,803 + B158DRAFT_1341 0.12 +0.0 1,382,808 + B158DRAFT_1341 0.13 -0.2 1,382,816 - B158DRAFT_1341 0.13 +0.2 1,382,823 + B158DRAFT_1341 0.14 -0.1 1,382,834 - B158DRAFT_1341 0.15 +0.4 1,382,859 + B158DRAFT_1341 0.16 +0.3 1,382,867 - B158DRAFT_1341 0.17 +1.3 1,382,872 + B158DRAFT_1341 0.17 -0.0 1,382,872 + B158DRAFT_1341 0.17 +0.1 1,382,872 + B158DRAFT_1341 0.17 +0.8 1,382,880 - B158DRAFT_1341 0.18 -0.4 1,382,880 - B158DRAFT_1341 0.18 -0.1 1,382,963 + B158DRAFT_1341 0.24 +0.2 1,382,994 - B158DRAFT_1341 0.26 +0.3 1,383,380 - B158DRAFT_1341 0.53 -0.1 1,383,395 - B158DRAFT_1341 0.54 +0.2 1,383,417 + B158DRAFT_1341 0.56 -0.2 1,383,417 + B158DRAFT_1341 0.56 +0.9 1,383,422 + B158DRAFT_1341 0.56 +0.3 1,383,425 - B158DRAFT_1341 0.56 -0.0 1,383,430 - B158DRAFT_1341 0.57 -0.1
Or see this region's nucleotide sequence