Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1234

Experiment: m.b. sodium fluoride 30 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1232 and B158DRAFT_1233 are separated by 325 nucleotidesB158DRAFT_1233 and B158DRAFT_1234 are separated by 89 nucleotidesB158DRAFT_1234 and B158DRAFT_1235 are separated by 137 nucleotides B158DRAFT_1232: B158DRAFT_1232 - Bacterioferritin-associated ferredoxin, at 1,270,704 to 1,270,934 _1232 B158DRAFT_1233: B158DRAFT_1233 - Multimeric flavodoxin WrbA, at 1,271,260 to 1,271,826 _1233 B158DRAFT_1234: B158DRAFT_1234 - Transcriptional regulator, at 1,271,916 to 1,272,875 _1234 B158DRAFT_1235: B158DRAFT_1235 - Peroxiredoxin, at 1,273,013 to 1,273,618 _1235 Position (kb) 1271 1272 1273Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1270.922 kb on + strandat 1271.297 kb on + strandat 1271.297 kb on + strandat 1271.338 kb on - strand, within B158DRAFT_1233at 1271.341 kb on - strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.348 kb on - strand, within B158DRAFT_1233at 1271.355 kb on - strand, within B158DRAFT_1233at 1271.355 kb on - strand, within B158DRAFT_1233at 1271.355 kb on - strand, within B158DRAFT_1233at 1271.355 kb on - strand, within B158DRAFT_1233at 1271.357 kb on + strand, within B158DRAFT_1233at 1271.357 kb on + strand, within B158DRAFT_1233at 1271.362 kb on + strand, within B158DRAFT_1233at 1271.365 kb on - strand, within B158DRAFT_1233at 1271.365 kb on - strand, within B158DRAFT_1233at 1271.365 kb on - strand, within B158DRAFT_1233at 1271.365 kb on - strand, within B158DRAFT_1233at 1271.365 kb on - strand, within B158DRAFT_1233at 1271.370 kb on - strand, within B158DRAFT_1233at 1271.370 kb on - strand, within B158DRAFT_1233at 1271.390 kb on - strand, within B158DRAFT_1233at 1271.396 kb on + strand, within B158DRAFT_1233at 1271.396 kb on + strand, within B158DRAFT_1233at 1271.397 kb on - strand, within B158DRAFT_1233at 1271.404 kb on - strand, within B158DRAFT_1233at 1271.404 kb on - strand, within B158DRAFT_1233at 1271.414 kb on - strand, within B158DRAFT_1233at 1271.428 kb on + strand, within B158DRAFT_1233at 1271.428 kb on + strand, within B158DRAFT_1233at 1271.451 kb on + strand, within B158DRAFT_1233at 1271.451 kb on + strand, within B158DRAFT_1233at 1271.459 kb on - strand, within B158DRAFT_1233at 1271.483 kb on - strand, within B158DRAFT_1233at 1271.485 kb on + strand, within B158DRAFT_1233at 1271.496 kb on + strand, within B158DRAFT_1233at 1271.496 kb on + strand, within B158DRAFT_1233at 1271.496 kb on + strand, within B158DRAFT_1233at 1271.496 kb on + strand, within B158DRAFT_1233at 1271.504 kb on + strand, within B158DRAFT_1233at 1271.504 kb on + strand, within B158DRAFT_1233at 1271.504 kb on + strand, within B158DRAFT_1233at 1271.504 kb on - strand, within B158DRAFT_1233at 1271.504 kb on - strand, within B158DRAFT_1233at 1271.504 kb on - strand, within B158DRAFT_1233at 1271.512 kb on - strand, within B158DRAFT_1233at 1271.512 kb on - strand, within B158DRAFT_1233at 1271.512 kb on - strand, within B158DRAFT_1233at 1271.562 kb on + strand, within B158DRAFT_1233at 1271.569 kb on + strand, within B158DRAFT_1233at 1271.569 kb on + strand, within B158DRAFT_1233at 1271.569 kb on + strand, within B158DRAFT_1233at 1271.569 kb on + strand, within B158DRAFT_1233at 1271.569 kb on + strand, within B158DRAFT_1233at 1271.569 kb on + strand, within B158DRAFT_1233at 1271.574 kb on + strand, within B158DRAFT_1233at 1271.577 kb on - strand, within B158DRAFT_1233at 1271.579 kb on + strand, within B158DRAFT_1233at 1271.579 kb on + strand, within B158DRAFT_1233at 1271.587 kb on - strand, within B158DRAFT_1233at 1271.594 kb on - strand, within B158DRAFT_1233at 1271.594 kb on - strand, within B158DRAFT_1233at 1271.609 kb on + strand, within B158DRAFT_1233at 1271.609 kb on + strand, within B158DRAFT_1233at 1271.617 kb on - strand, within B158DRAFT_1233at 1271.617 kb on - strand, within B158DRAFT_1233at 1271.624 kb on - strand, within B158DRAFT_1233at 1271.677 kb on - strand, within B158DRAFT_1233at 1271.677 kb on - strand, within B158DRAFT_1233at 1271.687 kb on - strand, within B158DRAFT_1233at 1271.737 kb on + strand, within B158DRAFT_1233at 1271.755 kb on + strand, within B158DRAFT_1233at 1271.763 kb on - strand, within B158DRAFT_1233at 1271.763 kb on - strand, within B158DRAFT_1233at 1271.763 kb on - strand, within B158DRAFT_1233at 1271.763 kb on - strand, within B158DRAFT_1233at 1271.781 kb on + strandat 1271.782 kb on + strandat 1271.782 kb on + strandat 1271.782 kb on + strandat 1271.794 kb on + strandat 1271.841 kb on - strandat 1271.860 kb on + strandat 1271.865 kb on + strandat 1271.865 kb on + strandat 1271.998 kb on - strandat 1272.054 kb on - strand, within B158DRAFT_1234at 1272.074 kb on + strand, within B158DRAFT_1234at 1272.074 kb on + strand, within B158DRAFT_1234at 1272.074 kb on + strand, within B158DRAFT_1234at 1272.082 kb on - strand, within B158DRAFT_1234at 1272.134 kb on + strand, within B158DRAFT_1234at 1272.134 kb on - strand, within B158DRAFT_1234at 1272.210 kb on + strand, within B158DRAFT_1234at 1272.210 kb on + strand, within B158DRAFT_1234at 1272.218 kb on - strand, within B158DRAFT_1234at 1272.282 kb on - strand, within B158DRAFT_1234at 1272.331 kb on + strand, within B158DRAFT_1234at 1272.397 kb on + strand, within B158DRAFT_1234at 1272.405 kb on - strand, within B158DRAFT_1234at 1272.405 kb on - strand, within B158DRAFT_1234at 1272.405 kb on - strand, within B158DRAFT_1234at 1272.433 kb on + strand, within B158DRAFT_1234at 1272.434 kb on - strand, within B158DRAFT_1234at 1272.441 kb on - strand, within B158DRAFT_1234at 1272.487 kb on + strand, within B158DRAFT_1234at 1272.510 kb on + strand, within B158DRAFT_1234at 1272.510 kb on + strand, within B158DRAFT_1234at 1272.618 kb on - strand, within B158DRAFT_1234at 1272.645 kb on + strand, within B158DRAFT_1234at 1272.653 kb on - strand, within B158DRAFT_1234at 1272.695 kb on - strand, within B158DRAFT_1234at 1272.785 kb on + strandat 1272.874 kb on + strandat 1272.876 kb on - strandat 1272.881 kb on + strandat 1273.061 kb on + strandat 1273.061 kb on + strandat 1273.061 kb on + strandat 1273.061 kb on + strandat 1273.069 kb on - strandat 1273.069 kb on - strandat 1273.069 kb on - strandat 1273.069 kb on - strandat 1273.088 kb on + strand, within B158DRAFT_1235at 1273.142 kb on + strand, within B158DRAFT_1235at 1273.142 kb on + strand, within B158DRAFT_1235at 1273.142 kb on + strand, within B158DRAFT_1235at 1273.150 kb on - strand, within B158DRAFT_1235at 1273.150 kb on - strand, within B158DRAFT_1235at 1273.202 kb on - strand, within B158DRAFT_1235at 1273.218 kb on + strand, within B158DRAFT_1235at 1273.218 kb on + strand, within B158DRAFT_1235at 1273.218 kb on + strand, within B158DRAFT_1235at 1273.221 kb on - strand, within B158DRAFT_1235at 1273.226 kb on - strandat 1273.270 kb on + strand, within B158DRAFT_1235at 1273.270 kb on + strand, within B158DRAFT_1235at 1273.270 kb on + strand, within B158DRAFT_1235at 1273.270 kb on + strand, within B158DRAFT_1235at 1273.270 kb on + strand, within B158DRAFT_1235at 1273.270 kb on + strand, within B158DRAFT_1235at 1273.278 kb on - strand, within B158DRAFT_1235at 1273.278 kb on - strand, within B158DRAFT_1235at 1273.278 kb on - strand, within B158DRAFT_1235at 1273.308 kb on - strand, within B158DRAFT_1235at 1273.310 kb on + strand, within B158DRAFT_1235at 1273.446 kb on - strand, within B158DRAFT_1235at 1273.496 kb on + strand, within B158DRAFT_1235at 1273.496 kb on + strand, within B158DRAFT_1235at 1273.496 kb on + strand, within B158DRAFT_1235at 1273.496 kb on + strand, within B158DRAFT_1235at 1273.588 kb on + strandat 1273.588 kb on + strandat 1273.588 kb on + strandat 1273.596 kb on - strandat 1273.596 kb on - strandat 1273.596 kb on - strandat 1273.596 kb on - strandat 1273.668 kb on + strandat 1273.717 kb on + strandat 1273.834 kb on - strandat 1273.834 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. sodium fluoride 30 mM
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1,270,922 + -1.1
1,271,297 + -0.6
1,271,297 + +0.2
1,271,338 - B158DRAFT_1233 0.14 -0.3
1,271,341 - B158DRAFT_1233 0.14 -0.5
1,271,347 + B158DRAFT_1233 0.15 +0.2
1,271,347 + B158DRAFT_1233 0.15 +0.3
1,271,347 + B158DRAFT_1233 0.15 +0.1
1,271,347 + B158DRAFT_1233 0.15 +0.0
1,271,347 + B158DRAFT_1233 0.15 +0.5
1,271,347 + B158DRAFT_1233 0.15 +0.0
1,271,347 + B158DRAFT_1233 0.15 -0.0
1,271,347 + B158DRAFT_1233 0.15 -0.2
1,271,348 - B158DRAFT_1233 0.16 -0.0
1,271,355 - B158DRAFT_1233 0.17 +0.1
1,271,355 - B158DRAFT_1233 0.17 -0.1
1,271,355 - B158DRAFT_1233 0.17 -0.9
1,271,355 - B158DRAFT_1233 0.17 -0.1
1,271,357 + B158DRAFT_1233 0.17 +0.3
1,271,357 + B158DRAFT_1233 0.17 -0.3
1,271,362 + B158DRAFT_1233 0.18 -0.0
1,271,365 - B158DRAFT_1233 0.19 +0.4
1,271,365 - B158DRAFT_1233 0.19 -0.4
1,271,365 - B158DRAFT_1233 0.19 +0.1
1,271,365 - B158DRAFT_1233 0.19 -0.5
1,271,365 - B158DRAFT_1233 0.19 -0.0
1,271,370 - B158DRAFT_1233 0.19 -0.3
1,271,370 - B158DRAFT_1233 0.19 +0.4
1,271,390 - B158DRAFT_1233 0.23 -0.4
1,271,396 + B158DRAFT_1233 0.24 -0.1
1,271,396 + B158DRAFT_1233 0.24 +1.3
1,271,397 - B158DRAFT_1233 0.24 -0.2
1,271,404 - B158DRAFT_1233 0.25 -0.1
1,271,404 - B158DRAFT_1233 0.25 -0.3
1,271,414 - B158DRAFT_1233 0.27 +0.3
1,271,428 + B158DRAFT_1233 0.30 -0.5
1,271,428 + B158DRAFT_1233 0.30 +0.1
1,271,451 + B158DRAFT_1233 0.34 +0.2
1,271,451 + B158DRAFT_1233 0.34 -0.1
1,271,459 - B158DRAFT_1233 0.35 +1.2
1,271,483 - B158DRAFT_1233 0.39 +0.1
1,271,485 + B158DRAFT_1233 0.40 -0.4
1,271,496 + B158DRAFT_1233 0.42 -0.1
1,271,496 + B158DRAFT_1233 0.42 +0.2
1,271,496 + B158DRAFT_1233 0.42 -0.0
1,271,496 + B158DRAFT_1233 0.42 -0.0
1,271,504 + B158DRAFT_1233 0.43 -0.7
1,271,504 + B158DRAFT_1233 0.43 -0.5
1,271,504 + B158DRAFT_1233 0.43 -0.2
1,271,504 - B158DRAFT_1233 0.43 +0.1
1,271,504 - B158DRAFT_1233 0.43 +0.2
1,271,504 - B158DRAFT_1233 0.43 -0.2
1,271,512 - B158DRAFT_1233 0.44 -0.1
1,271,512 - B158DRAFT_1233 0.44 -0.4
1,271,512 - B158DRAFT_1233 0.44 -0.1
1,271,562 + B158DRAFT_1233 0.53 -0.0
1,271,569 + B158DRAFT_1233 0.54 -0.2
1,271,569 + B158DRAFT_1233 0.54 -0.3
1,271,569 + B158DRAFT_1233 0.54 -0.2
1,271,569 + B158DRAFT_1233 0.54 -0.1
1,271,569 + B158DRAFT_1233 0.54 -0.1
1,271,569 + B158DRAFT_1233 0.54 -0.2
1,271,574 + B158DRAFT_1233 0.55 +0.0
1,271,577 - B158DRAFT_1233 0.56 -0.3
1,271,579 + B158DRAFT_1233 0.56 -0.5
1,271,579 + B158DRAFT_1233 0.56 +0.0
1,271,587 - B158DRAFT_1233 0.58 +0.5
1,271,594 - B158DRAFT_1233 0.59 -0.0
1,271,594 - B158DRAFT_1233 0.59 -2.0
1,271,609 + B158DRAFT_1233 0.62 +0.9
1,271,609 + B158DRAFT_1233 0.62 -0.9
1,271,617 - B158DRAFT_1233 0.63 +0.4
1,271,617 - B158DRAFT_1233 0.63 -0.0
1,271,624 - B158DRAFT_1233 0.64 +0.5
1,271,677 - B158DRAFT_1233 0.74 -0.3
1,271,677 - B158DRAFT_1233 0.74 +0.6
1,271,687 - B158DRAFT_1233 0.75 -0.5
1,271,737 + B158DRAFT_1233 0.84 +0.0
1,271,755 + B158DRAFT_1233 0.87 -0.3
1,271,763 - B158DRAFT_1233 0.89 -0.2
1,271,763 - B158DRAFT_1233 0.89 +0.4
1,271,763 - B158DRAFT_1233 0.89 +0.2
1,271,763 - B158DRAFT_1233 0.89 -0.2
1,271,781 + +0.0
1,271,782 + -0.7
1,271,782 + +0.1
1,271,782 + -0.6
1,271,794 + -0.1
1,271,841 - +0.2
1,271,860 + -0.2
1,271,865 + +0.1
1,271,865 + +0.2
1,271,998 - -0.3
1,272,054 - B158DRAFT_1234 0.14 -0.2
1,272,074 + B158DRAFT_1234 0.16 +1.8
1,272,074 + B158DRAFT_1234 0.16 -0.1
1,272,074 + B158DRAFT_1234 0.16 -0.6
1,272,082 - B158DRAFT_1234 0.17 -0.2
1,272,134 + B158DRAFT_1234 0.23 -0.3
1,272,134 - B158DRAFT_1234 0.23 +0.2
1,272,210 + B158DRAFT_1234 0.31 -0.2
1,272,210 + B158DRAFT_1234 0.31 -1.5
1,272,218 - B158DRAFT_1234 0.31 -0.3
1,272,282 - B158DRAFT_1234 0.38 +0.2
1,272,331 + B158DRAFT_1234 0.43 +0.1
1,272,397 + B158DRAFT_1234 0.50 +0.1
1,272,405 - B158DRAFT_1234 0.51 -0.1
1,272,405 - B158DRAFT_1234 0.51 -0.3
1,272,405 - B158DRAFT_1234 0.51 -0.2
1,272,433 + B158DRAFT_1234 0.54 -0.1
1,272,434 - B158DRAFT_1234 0.54 +0.2
1,272,441 - B158DRAFT_1234 0.55 -1.1
1,272,487 + B158DRAFT_1234 0.59 -1.0
1,272,510 + B158DRAFT_1234 0.62 -0.3
1,272,510 + B158DRAFT_1234 0.62 -0.2
1,272,618 - B158DRAFT_1234 0.73 -0.2
1,272,645 + B158DRAFT_1234 0.76 +1.3
1,272,653 - B158DRAFT_1234 0.77 +0.2
1,272,695 - B158DRAFT_1234 0.81 -0.3
1,272,785 + +0.4
1,272,874 + -1.3
1,272,876 - -0.7
1,272,881 + -0.1
1,273,061 + -0.2
1,273,061 + -0.3
1,273,061 + +1.3
1,273,061 + -0.4
1,273,069 - +0.1
1,273,069 - -0.4
1,273,069 - -0.4
1,273,069 - -0.4
1,273,088 + B158DRAFT_1235 0.12 -0.3
1,273,142 + B158DRAFT_1235 0.21 +0.1
1,273,142 + B158DRAFT_1235 0.21 -0.2
1,273,142 + B158DRAFT_1235 0.21 -0.2
1,273,150 - B158DRAFT_1235 0.23 +0.1
1,273,150 - B158DRAFT_1235 0.23 +0.2
1,273,202 - B158DRAFT_1235 0.31 -1.5
1,273,218 + B158DRAFT_1235 0.34 -0.5
1,273,218 + B158DRAFT_1235 0.34 -0.3
1,273,218 + B158DRAFT_1235 0.34 -0.6
1,273,221 - B158DRAFT_1235 0.34 -0.9
1,273,226 - +0.3
1,273,270 + B158DRAFT_1235 0.42 +0.1
1,273,270 + B158DRAFT_1235 0.42 +0.1
1,273,270 + B158DRAFT_1235 0.42 +0.4
1,273,270 + B158DRAFT_1235 0.42 -0.1
1,273,270 + B158DRAFT_1235 0.42 +0.6
1,273,270 + B158DRAFT_1235 0.42 +0.0
1,273,278 - B158DRAFT_1235 0.44 -0.4
1,273,278 - B158DRAFT_1235 0.44 -0.4
1,273,278 - B158DRAFT_1235 0.44 -0.5
1,273,308 - B158DRAFT_1235 0.49 -0.6
1,273,310 + B158DRAFT_1235 0.49 -0.3
1,273,446 - B158DRAFT_1235 0.71 -0.1
1,273,496 + B158DRAFT_1235 0.80 -0.2
1,273,496 + B158DRAFT_1235 0.80 +0.1
1,273,496 + B158DRAFT_1235 0.80 -0.5
1,273,496 + B158DRAFT_1235 0.80 +3.0
1,273,588 + -0.5
1,273,588 + -0.1
1,273,588 + -0.3
1,273,596 - +1.1
1,273,596 - -0.4
1,273,596 - +0.2
1,273,596 - -0.5
1,273,668 + +1.0
1,273,717 + -0.7
1,273,834 - +0.3
1,273,834 - -0.7

Or see this region's nucleotide sequence