Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0978

Experiment: m.b. sodium fluoride 30 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0977 and B158DRAFT_0978 are separated by 149 nucleotidesB158DRAFT_0978 and B158DRAFT_0979 are separated by 27 nucleotides B158DRAFT_0977: B158DRAFT_0977 - Predicted phosphohydrolases, at 1,007,173 to 1,007,997 _0977 B158DRAFT_0978: B158DRAFT_0978 - DNA topoisomerase IV, B subunit, proteobacterial, at 1,008,147 to 1,010,036 _0978 B158DRAFT_0979: B158DRAFT_0979 - DNA topoisomerase IV, A subunit, proteobacterial, at 1,010,064 to 1,012,304 _0979 Position (kb) 1008 1009 1010 1011Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1007.178 kb on - strandat 1007.184 kb on - strandat 1007.231 kb on + strandat 1007.231 kb on + strandat 1007.239 kb on - strandat 1007.270 kb on - strand, within B158DRAFT_0977at 1007.373 kb on + strand, within B158DRAFT_0977at 1007.376 kb on + strand, within B158DRAFT_0977at 1007.378 kb on + strand, within B158DRAFT_0977at 1007.378 kb on + strand, within B158DRAFT_0977at 1007.378 kb on + strand, within B158DRAFT_0977at 1007.378 kb on + strand, within B158DRAFT_0977at 1007.378 kb on + strand, within B158DRAFT_0977at 1007.381 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.424 kb on - strand, within B158DRAFT_0977at 1007.462 kb on - strand, within B158DRAFT_0977at 1007.478 kb on - strand, within B158DRAFT_0977at 1007.563 kb on - strand, within B158DRAFT_0977at 1007.567 kb on + strand, within B158DRAFT_0977at 1007.567 kb on + strand, within B158DRAFT_0977at 1007.572 kb on + strand, within B158DRAFT_0977at 1007.604 kb on - strand, within B158DRAFT_0977at 1007.606 kb on + strand, within B158DRAFT_0977at 1007.606 kb on + strand, within B158DRAFT_0977at 1007.606 kb on + strand, within B158DRAFT_0977at 1007.614 kb on - strand, within B158DRAFT_0977at 1007.614 kb on - strand, within B158DRAFT_0977at 1007.614 kb on - strand, within B158DRAFT_0977at 1007.614 kb on - strand, within B158DRAFT_0977at 1007.630 kb on + strand, within B158DRAFT_0977at 1007.754 kb on + strand, within B158DRAFT_0977at 1007.754 kb on + strand, within B158DRAFT_0977at 1007.762 kb on - strand, within B158DRAFT_0977at 1007.762 kb on - strand, within B158DRAFT_0977at 1007.762 kb on - strand, within B158DRAFT_0977at 1007.888 kb on + strand, within B158DRAFT_0977at 1007.896 kb on - strand, within B158DRAFT_0977at 1007.896 kb on - strand, within B158DRAFT_0977at 1007.896 kb on - strand, within B158DRAFT_0977at 1007.915 kb on + strandat 1007.915 kb on + strandat 1007.923 kb on - strandat 1008.017 kb on - strandat 1008.024 kb on + strandat 1008.027 kb on - strandat 1008.029 kb on + strandat 1008.029 kb on + strandat 1008.029 kb on + strandat 1008.029 kb on + strandat 1008.029 kb on + strandat 1008.037 kb on - strandat 1008.037 kb on - strandat 1008.037 kb on - strandat 1008.037 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. sodium fluoride 30 mM
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1,007,178 - -2.8
1,007,184 - -3.1
1,007,231 + -3.2
1,007,231 + -2.8
1,007,239 - -2.5
1,007,270 - B158DRAFT_0977 0.12 -1.7
1,007,373 + B158DRAFT_0977 0.24 -2.6
1,007,376 + B158DRAFT_0977 0.25 -0.6
1,007,378 + B158DRAFT_0977 0.25 -3.3
1,007,378 + B158DRAFT_0977 0.25 -2.9
1,007,378 + B158DRAFT_0977 0.25 -3.5
1,007,378 + B158DRAFT_0977 0.25 -1.2
1,007,378 + B158DRAFT_0977 0.25 -3.3
1,007,381 - B158DRAFT_0977 0.25 -3.6
1,007,386 - B158DRAFT_0977 0.26 -2.4
1,007,386 - B158DRAFT_0977 0.26 -2.2
1,007,386 - B158DRAFT_0977 0.26 -3.0
1,007,386 - B158DRAFT_0977 0.26 -3.9
1,007,386 - B158DRAFT_0977 0.26 -3.7
1,007,386 - B158DRAFT_0977 0.26 -2.6
1,007,386 - B158DRAFT_0977 0.26 -3.4
1,007,386 - B158DRAFT_0977 0.26 -1.5
1,007,386 - B158DRAFT_0977 0.26 -3.2
1,007,386 - B158DRAFT_0977 0.26 -3.5
1,007,386 - B158DRAFT_0977 0.26 -2.3
1,007,424 - B158DRAFT_0977 0.30 -2.5
1,007,462 - B158DRAFT_0977 0.35 -3.6
1,007,478 - B158DRAFT_0977 0.37 -2.8
1,007,563 - B158DRAFT_0977 0.47 -2.8
1,007,567 + B158DRAFT_0977 0.48 -2.7
1,007,567 + B158DRAFT_0977 0.48 -2.9
1,007,572 + B158DRAFT_0977 0.48 -4.2
1,007,604 - B158DRAFT_0977 0.52 -2.7
1,007,606 + B158DRAFT_0977 0.52 -2.6
1,007,606 + B158DRAFT_0977 0.52 -2.4
1,007,606 + B158DRAFT_0977 0.52 -1.6
1,007,614 - B158DRAFT_0977 0.53 -3.2
1,007,614 - B158DRAFT_0977 0.53 -0.6
1,007,614 - B158DRAFT_0977 0.53 -3.2
1,007,614 - B158DRAFT_0977 0.53 -2.2
1,007,630 + B158DRAFT_0977 0.55 -3.1
1,007,754 + B158DRAFT_0977 0.70 -4.1
1,007,754 + B158DRAFT_0977 0.70 -2.9
1,007,762 - B158DRAFT_0977 0.71 -3.0
1,007,762 - B158DRAFT_0977 0.71 -2.8
1,007,762 - B158DRAFT_0977 0.71 -2.9
1,007,888 + B158DRAFT_0977 0.87 -2.7
1,007,896 - B158DRAFT_0977 0.88 -1.6
1,007,896 - B158DRAFT_0977 0.88 -3.0
1,007,896 - B158DRAFT_0977 0.88 -3.0
1,007,915 + -3.3
1,007,915 + -0.9
1,007,923 - -2.3
1,008,017 - -1.0
1,008,024 + +0.1
1,008,027 - +0.1
1,008,029 + -0.2
1,008,029 + +0.2
1,008,029 + -0.2
1,008,029 + +0.0
1,008,029 + -0.2
1,008,037 - -1.0
1,008,037 - -0.6
1,008,037 - -0.6
1,008,037 - -0.2

Or see this region's nucleotide sequence