Experiment: m.b. sodium fluoride 30 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0973 and B158DRAFT_0974 are separated by 55 nucleotides B158DRAFT_0974 and B158DRAFT_0975 are separated by 196 nucleotides B158DRAFT_0975 and B158DRAFT_0976 are separated by 32 nucleotides
B158DRAFT_0973: B158DRAFT_0973 - type I secretion outer membrane protein, TolC family, at 1,003,718 to 1,005,091
_0973
B158DRAFT_0974: B158DRAFT_0974 - Protein-L-isoaspartate carboxylmethyltransferase, at 1,005,147 to 1,005,815
_0974
B158DRAFT_0975: B158DRAFT_0975 - nudix-type nucleoside diphosphatase, YffH/AdpP family, at 1,006,012 to 1,006,623
_0975
B158DRAFT_0976: B158DRAFT_0976 - Uncharacterized protein conserved in bacteria, at 1,006,656 to 1,007,132
_0976
Position (kb)
1005
1006 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 1004.165 kb on + strand, within B158DRAFT_0973 at 1004.173 kb on - strand, within B158DRAFT_0973 at 1004.173 kb on - strand, within B158DRAFT_0973 at 1004.173 kb on - strand, within B158DRAFT_0973 at 1004.223 kb on - strand, within B158DRAFT_0973 at 1004.223 kb on - strand, within B158DRAFT_0973 at 1004.231 kb on + strand, within B158DRAFT_0973 at 1004.231 kb on + strand, within B158DRAFT_0973 at 1004.239 kb on - strand, within B158DRAFT_0973 at 1004.241 kb on + strand, within B158DRAFT_0973 at 1004.254 kb on - strand, within B158DRAFT_0973 at 1004.310 kb on + strand, within B158DRAFT_0973 at 1004.310 kb on + strand, within B158DRAFT_0973 at 1004.444 kb on + strand, within B158DRAFT_0973 at 1004.446 kb on + strand, within B158DRAFT_0973 at 1004.454 kb on + strand, within B158DRAFT_0973 at 1004.454 kb on + strand, within B158DRAFT_0973 at 1004.454 kb on + strand, within B158DRAFT_0973 at 1004.454 kb on - strand, within B158DRAFT_0973 at 1004.462 kb on - strand, within B158DRAFT_0973 at 1004.462 kb on - strand, within B158DRAFT_0973 at 1004.489 kb on + strand, within B158DRAFT_0973 at 1004.497 kb on - strand, within B158DRAFT_0973 at 1004.505 kb on + strand, within B158DRAFT_0973 at 1004.538 kb on + strand, within B158DRAFT_0973 at 1004.546 kb on - strand, within B158DRAFT_0973 at 1004.546 kb on - strand, within B158DRAFT_0973 at 1004.546 kb on - strand, within B158DRAFT_0973 at 1004.592 kb on - strand, within B158DRAFT_0973 at 1004.651 kb on + strand, within B158DRAFT_0973 at 1004.651 kb on + strand, within B158DRAFT_0973 at 1004.694 kb on + strand, within B158DRAFT_0973 at 1004.696 kb on + strand, within B158DRAFT_0973 at 1004.696 kb on + strand, within B158DRAFT_0973 at 1004.696 kb on + strand, within B158DRAFT_0973 at 1004.696 kb on + strand, within B158DRAFT_0973 at 1004.696 kb on + strand, within B158DRAFT_0973 at 1004.696 kb on + strand, within B158DRAFT_0973 at 1004.701 kb on + strand, within B158DRAFT_0973 at 1004.704 kb on - strand, within B158DRAFT_0973 at 1004.704 kb on - strand, within B158DRAFT_0973 at 1004.704 kb on - strand, within B158DRAFT_0973 at 1004.704 kb on - strand, within B158DRAFT_0973 at 1004.704 kb on - strand, within B158DRAFT_0973 at 1004.704 kb on - strand, within B158DRAFT_0973 at 1004.704 kb on - strand, within B158DRAFT_0973 at 1004.704 kb on - strand, within B158DRAFT_0973 at 1004.709 kb on - strand, within B158DRAFT_0973 at 1004.717 kb on - strand, within B158DRAFT_0973 at 1004.725 kb on - strand, within B158DRAFT_0973 at 1004.729 kb on - strand, within B158DRAFT_0973 at 1004.731 kb on + strand, within B158DRAFT_0973 at 1004.739 kb on - strand, within B158DRAFT_0973 at 1004.818 kb on + strand, within B158DRAFT_0973 at 1004.840 kb on + strand, within B158DRAFT_0973 at 1004.848 kb on - strand, within B158DRAFT_0973 at 1004.886 kb on + strand, within B158DRAFT_0973 at 1004.891 kb on + strand, within B158DRAFT_0973 at 1004.935 kb on - strand, within B158DRAFT_0973 at 1005.011 kb on - strand at 1005.278 kb on + strand, within B158DRAFT_0974 at 1005.278 kb on - strand, within B158DRAFT_0974 at 1005.283 kb on + strand, within B158DRAFT_0974 at 1005.283 kb on + strand, within B158DRAFT_0974 at 1005.326 kb on - strand, within B158DRAFT_0974 at 1005.326 kb on - strand, within B158DRAFT_0974 at 1005.373 kb on + strand, within B158DRAFT_0974 at 1005.453 kb on - strand, within B158DRAFT_0974 at 1005.497 kb on - strand, within B158DRAFT_0974 at 1005.497 kb on - strand, within B158DRAFT_0974 at 1005.521 kb on + strand, within B158DRAFT_0974 at 1005.531 kb on - strand, within B158DRAFT_0974 at 1005.565 kb on - strand, within B158DRAFT_0974 at 1005.593 kb on + strand, within B158DRAFT_0974 at 1005.593 kb on + strand, within B158DRAFT_0974 at 1005.594 kb on - strand, within B158DRAFT_0974 at 1005.627 kb on - strand, within B158DRAFT_0974 at 1005.629 kb on + strand, within B158DRAFT_0974 at 1005.637 kb on - strand, within B158DRAFT_0974 at 1005.637 kb on - strand, within B158DRAFT_0974 at 1005.675 kb on + strand, within B158DRAFT_0974 at 1005.675 kb on + strand, within B158DRAFT_0974 at 1005.675 kb on + strand, within B158DRAFT_0974 at 1005.675 kb on + strand, within B158DRAFT_0974 at 1005.675 kb on + strand, within B158DRAFT_0974 at 1005.675 kb on + strand, within B158DRAFT_0974 at 1005.683 kb on - strand, within B158DRAFT_0974 at 1005.694 kb on - strand, within B158DRAFT_0974 at 1005.772 kb on - strand at 1005.774 kb on + strand at 1005.841 kb on - strand at 1005.841 kb on - strand at 1005.876 kb on + strand at 1005.876 kb on + strand at 1005.884 kb on - strand at 1005.884 kb on - strand at 1005.903 kb on + strand at 1005.904 kb on - strand at 1005.924 kb on - strand at 1005.972 kb on - strand at 1005.986 kb on + strand at 1005.993 kb on - strand at 1006.004 kb on - strand at 1006.131 kb on - strand, within B158DRAFT_0975 at 1006.133 kb on + strand, within B158DRAFT_0975 at 1006.133 kb on + strand, within B158DRAFT_0975 at 1006.133 kb on + strand, within B158DRAFT_0975 at 1006.133 kb on + strand, within B158DRAFT_0975 at 1006.133 kb on + strand, within B158DRAFT_0975 at 1006.135 kb on + strand, within B158DRAFT_0975 at 1006.135 kb on + strand, within B158DRAFT_0975 at 1006.135 kb on + strand, within B158DRAFT_0975 at 1006.135 kb on + strand, within B158DRAFT_0975 at 1006.135 kb on + strand, within B158DRAFT_0975 at 1006.141 kb on - strand, within B158DRAFT_0975 at 1006.141 kb on - strand, within B158DRAFT_0975 at 1006.141 kb on - strand, within B158DRAFT_0975 at 1006.141 kb on - strand, within B158DRAFT_0975 at 1006.141 kb on - strand, within B158DRAFT_0975 at 1006.143 kb on - strand, within B158DRAFT_0975 at 1006.143 kb on - strand, within B158DRAFT_0975 at 1006.143 kb on - strand, within B158DRAFT_0975 at 1006.199 kb on - strand, within B158DRAFT_0975 at 1006.214 kb on + strand, within B158DRAFT_0975 at 1006.219 kb on + strand, within B158DRAFT_0975 at 1006.227 kb on - strand, within B158DRAFT_0975 at 1006.246 kb on + strand, within B158DRAFT_0975 at 1006.254 kb on - strand, within B158DRAFT_0975 at 1006.254 kb on - strand, within B158DRAFT_0975 at 1006.259 kb on - strand, within B158DRAFT_0975 at 1006.264 kb on - strand, within B158DRAFT_0975 at 1006.287 kb on + strand, within B158DRAFT_0975 at 1006.305 kb on - strand, within B158DRAFT_0975 at 1006.307 kb on + strand, within B158DRAFT_0975 at 1006.335 kb on + strand, within B158DRAFT_0975 at 1006.338 kb on - strand, within B158DRAFT_0975 at 1006.339 kb on - strand, within B158DRAFT_0975 at 1006.379 kb on + strand, within B158DRAFT_0975 at 1006.385 kb on + strand, within B158DRAFT_0975 at 1006.394 kb on - strand, within B158DRAFT_0975 at 1006.400 kb on + strand, within B158DRAFT_0975 at 1006.411 kb on - strand, within B158DRAFT_0975 at 1006.411 kb on - strand, within B158DRAFT_0975 at 1006.428 kb on + strand, within B158DRAFT_0975 at 1006.488 kb on + strand, within B158DRAFT_0975 at 1006.645 kb on + strand at 1006.653 kb on + strand at 1006.653 kb on + strand at 1006.653 kb on - strand at 1006.694 kb on + strand at 1006.694 kb on + strand at 1006.702 kb on - strand at 1006.702 kb on - strand at 1006.739 kb on + strand, within B158DRAFT_0976 at 1006.752 kb on + strand, within B158DRAFT_0976 at 1006.758 kb on + strand, within B158DRAFT_0976 at 1006.814 kb on + strand, within B158DRAFT_0976
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 30 mM remove 1,004,165 + B158DRAFT_0973 0.33 -2.0 1,004,173 - B158DRAFT_0973 0.33 -3.9 1,004,173 - B158DRAFT_0973 0.33 -2.2 1,004,173 - B158DRAFT_0973 0.33 -2.7 1,004,223 - B158DRAFT_0973 0.37 -3.7 1,004,223 - B158DRAFT_0973 0.37 -2.8 1,004,231 + B158DRAFT_0973 0.37 -4.4 1,004,231 + B158DRAFT_0973 0.37 -4.8 1,004,239 - B158DRAFT_0973 0.38 -3.4 1,004,241 + B158DRAFT_0973 0.38 -2.6 1,004,254 - B158DRAFT_0973 0.39 -2.5 1,004,310 + B158DRAFT_0973 0.43 -2.4 1,004,310 + B158DRAFT_0973 0.43 -2.9 1,004,444 + B158DRAFT_0973 0.53 -4.0 1,004,446 + B158DRAFT_0973 0.53 -1.6 1,004,454 + B158DRAFT_0973 0.54 -1.9 1,004,454 + B158DRAFT_0973 0.54 -4.3 1,004,454 + B158DRAFT_0973 0.54 -2.3 1,004,454 - B158DRAFT_0973 0.54 -3.2 1,004,462 - B158DRAFT_0973 0.54 -2.1 1,004,462 - B158DRAFT_0973 0.54 -3.9 1,004,489 + B158DRAFT_0973 0.56 -2.6 1,004,497 - B158DRAFT_0973 0.57 -1.9 1,004,505 + B158DRAFT_0973 0.57 -3.5 1,004,538 + B158DRAFT_0973 0.60 -0.4 1,004,546 - B158DRAFT_0973 0.60 -3.0 1,004,546 - B158DRAFT_0973 0.60 -3.9 1,004,546 - B158DRAFT_0973 0.60 -2.4 1,004,592 - B158DRAFT_0973 0.64 -2.6 1,004,651 + B158DRAFT_0973 0.68 -2.8 1,004,651 + B158DRAFT_0973 0.68 -2.9 1,004,694 + B158DRAFT_0973 0.71 -3.7 1,004,696 + B158DRAFT_0973 0.71 -3.2 1,004,696 + B158DRAFT_0973 0.71 -3.4 1,004,696 + B158DRAFT_0973 0.71 -3.3 1,004,696 + B158DRAFT_0973 0.71 -3.3 1,004,696 + B158DRAFT_0973 0.71 -2.2 1,004,696 + B158DRAFT_0973 0.71 -2.7 1,004,701 + B158DRAFT_0973 0.72 -3.8 1,004,704 - B158DRAFT_0973 0.72 -3.4 1,004,704 - B158DRAFT_0973 0.72 -3.6 1,004,704 - B158DRAFT_0973 0.72 -2.2 1,004,704 - B158DRAFT_0973 0.72 -2.9 1,004,704 - B158DRAFT_0973 0.72 -2.3 1,004,704 - B158DRAFT_0973 0.72 -2.3 1,004,704 - B158DRAFT_0973 0.72 -3.1 1,004,704 - B158DRAFT_0973 0.72 -4.1 1,004,709 - B158DRAFT_0973 0.72 -3.0 1,004,717 - B158DRAFT_0973 0.73 -2.5 1,004,725 - B158DRAFT_0973 0.73 -3.4 1,004,729 - B158DRAFT_0973 0.74 -3.9 1,004,731 + B158DRAFT_0973 0.74 -2.3 1,004,739 - B158DRAFT_0973 0.74 -3.4 1,004,818 + B158DRAFT_0973 0.80 -2.8 1,004,840 + B158DRAFT_0973 0.82 -4.7 1,004,848 - B158DRAFT_0973 0.82 -1.0 1,004,886 + B158DRAFT_0973 0.85 -2.2 1,004,891 + B158DRAFT_0973 0.85 -2.4 1,004,935 - B158DRAFT_0973 0.89 -3.5 1,005,011 - -1.8 1,005,278 + B158DRAFT_0974 0.20 -0.3 1,005,278 - B158DRAFT_0974 0.20 +0.2 1,005,283 + B158DRAFT_0974 0.20 -1.0 1,005,283 + B158DRAFT_0974 0.20 -1.0 1,005,326 - B158DRAFT_0974 0.27 +0.5 1,005,326 - B158DRAFT_0974 0.27 +0.8 1,005,373 + B158DRAFT_0974 0.34 +0.1 1,005,453 - B158DRAFT_0974 0.46 +0.1 1,005,497 - B158DRAFT_0974 0.52 -0.3 1,005,497 - B158DRAFT_0974 0.52 -0.2 1,005,521 + B158DRAFT_0974 0.56 -1.0 1,005,531 - B158DRAFT_0974 0.57 -0.3 1,005,565 - B158DRAFT_0974 0.62 +0.1 1,005,593 + B158DRAFT_0974 0.67 -1.6 1,005,593 + B158DRAFT_0974 0.67 -2.4 1,005,594 - B158DRAFT_0974 0.67 -0.4 1,005,627 - B158DRAFT_0974 0.72 +0.1 1,005,629 + B158DRAFT_0974 0.72 -0.6 1,005,637 - B158DRAFT_0974 0.73 +0.3 1,005,637 - B158DRAFT_0974 0.73 +0.1 1,005,675 + B158DRAFT_0974 0.79 -1.1 1,005,675 + B158DRAFT_0974 0.79 -1.6 1,005,675 + B158DRAFT_0974 0.79 -0.4 1,005,675 + B158DRAFT_0974 0.79 -1.2 1,005,675 + B158DRAFT_0974 0.79 +1.7 1,005,675 + B158DRAFT_0974 0.79 +0.4 1,005,683 - B158DRAFT_0974 0.80 +0.7 1,005,694 - B158DRAFT_0974 0.82 +0.6 1,005,772 - -0.2 1,005,774 + -1.7 1,005,841 - -0.3 1,005,841 - -1.5 1,005,876 + -2.5 1,005,876 + -2.0 1,005,884 - -1.4 1,005,884 - -1.2 1,005,903 + -0.8 1,005,904 - +0.3 1,005,924 - -1.0 1,005,972 - -1.6 1,005,986 + -0.3 1,005,993 - +0.1 1,006,004 - -0.3 1,006,131 - B158DRAFT_0975 0.19 +0.0 1,006,133 + B158DRAFT_0975 0.20 -0.2 1,006,133 + B158DRAFT_0975 0.20 +0.1 1,006,133 + B158DRAFT_0975 0.20 -2.2 1,006,133 + B158DRAFT_0975 0.20 -1.2 1,006,133 + B158DRAFT_0975 0.20 +0.5 1,006,135 + B158DRAFT_0975 0.20 +0.1 1,006,135 + B158DRAFT_0975 0.20 +0.1 1,006,135 + B158DRAFT_0975 0.20 -0.4 1,006,135 + B158DRAFT_0975 0.20 -0.3 1,006,135 + B158DRAFT_0975 0.20 +0.1 1,006,141 - B158DRAFT_0975 0.21 +0.2 1,006,141 - B158DRAFT_0975 0.21 +0.0 1,006,141 - B158DRAFT_0975 0.21 +0.8 1,006,141 - B158DRAFT_0975 0.21 -0.2 1,006,141 - B158DRAFT_0975 0.21 +0.1 1,006,143 - B158DRAFT_0975 0.21 -0.1 1,006,143 - B158DRAFT_0975 0.21 +0.4 1,006,143 - B158DRAFT_0975 0.21 -0.1 1,006,199 - B158DRAFT_0975 0.31 -0.2 1,006,214 + B158DRAFT_0975 0.33 +0.2 1,006,219 + B158DRAFT_0975 0.34 -0.8 1,006,227 - B158DRAFT_0975 0.35 +0.3 1,006,246 + B158DRAFT_0975 0.38 -0.1 1,006,254 - B158DRAFT_0975 0.40 +0.0 1,006,254 - B158DRAFT_0975 0.40 -0.6 1,006,259 - B158DRAFT_0975 0.40 -0.1 1,006,264 - B158DRAFT_0975 0.41 +0.7 1,006,287 + B158DRAFT_0975 0.45 +0.3 1,006,305 - B158DRAFT_0975 0.48 -0.1 1,006,307 + B158DRAFT_0975 0.48 -0.2 1,006,335 + B158DRAFT_0975 0.53 -0.7 1,006,338 - B158DRAFT_0975 0.53 -1.0 1,006,339 - B158DRAFT_0975 0.53 -0.1 1,006,379 + B158DRAFT_0975 0.60 +0.7 1,006,385 + B158DRAFT_0975 0.61 +0.3 1,006,394 - B158DRAFT_0975 0.62 -0.6 1,006,400 + B158DRAFT_0975 0.63 -0.1 1,006,411 - B158DRAFT_0975 0.65 -0.3 1,006,411 - B158DRAFT_0975 0.65 -0.4 1,006,428 + B158DRAFT_0975 0.68 -0.3 1,006,488 + B158DRAFT_0975 0.78 -0.2 1,006,645 + -0.7 1,006,653 + -0.5 1,006,653 + -0.8 1,006,653 - +0.2 1,006,694 + -0.6 1,006,694 + -0.5 1,006,702 - -0.5 1,006,702 - -0.5 1,006,739 + B158DRAFT_0976 0.17 +0.5 1,006,752 + B158DRAFT_0976 0.20 -0.1 1,006,758 + B158DRAFT_0976 0.21 +0.7 1,006,814 + B158DRAFT_0976 0.33 +0.0
Or see this region's nucleotide sequence