Experiment: m.b. sodium fluoride 30 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0582 and B158DRAFT_0583 are separated by 125 nucleotides B158DRAFT_0583 and B158DRAFT_0584 are separated by 5 nucleotides B158DRAFT_0584 and B158DRAFT_0585 are separated by 216 nucleotides
B158DRAFT_0582: B158DRAFT_0582 - TIGR00255 family protein, at 588,465 to 589,331
_0582
B158DRAFT_0583: B158DRAFT_0583 - Bis(5'nucleosyl)-tetraphosphatase, ApaH, at 589,457 to 590,266
_0583
B158DRAFT_0584: B158DRAFT_0584 - Uncharacterized protein affecting Mg2+/Co2+ transport, at 590,272 to 590,649
_0584
B158DRAFT_0585: B158DRAFT_0585 - Short-chain alcohol dehydrogenase of unknown specificity, at 590,866 to 591,648
_0585
Position (kb) 589
590
591 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 588.482 kb on - strand at 588.625 kb on + strand, within B158DRAFT_0582 at 588.661 kb on + strand, within B158DRAFT_0582 at 588.661 kb on + strand, within B158DRAFT_0582 at 588.730 kb on - strand, within B158DRAFT_0582 at 588.830 kb on + strand, within B158DRAFT_0582 at 588.920 kb on - strand, within B158DRAFT_0582 at 588.923 kb on + strand, within B158DRAFT_0582 at 588.923 kb on + strand, within B158DRAFT_0582 at 588.939 kb on - strand, within B158DRAFT_0582 at 588.980 kb on + strand, within B158DRAFT_0582 at 589.012 kb on - strand, within B158DRAFT_0582 at 589.013 kb on + strand, within B158DRAFT_0582 at 589.013 kb on + strand, within B158DRAFT_0582 at 589.021 kb on - strand, within B158DRAFT_0582 at 589.021 kb on - strand, within B158DRAFT_0582 at 589.021 kb on - strand, within B158DRAFT_0582 at 589.021 kb on - strand, within B158DRAFT_0582 at 589.021 kb on - strand, within B158DRAFT_0582 at 589.032 kb on - strand, within B158DRAFT_0582 at 589.093 kb on + strand, within B158DRAFT_0582 at 589.136 kb on + strand, within B158DRAFT_0582 at 589.136 kb on + strand, within B158DRAFT_0582 at 589.138 kb on + strand, within B158DRAFT_0582 at 589.144 kb on - strand, within B158DRAFT_0582 at 589.144 kb on - strand, within B158DRAFT_0582 at 589.146 kb on - strand, within B158DRAFT_0582 at 589.155 kb on - strand, within B158DRAFT_0582 at 589.170 kb on + strand, within B158DRAFT_0582 at 589.170 kb on + strand, within B158DRAFT_0582 at 589.175 kb on + strand, within B158DRAFT_0582 at 589.175 kb on + strand, within B158DRAFT_0582 at 589.175 kb on + strand, within B158DRAFT_0582 at 589.175 kb on + strand, within B158DRAFT_0582 at 589.175 kb on + strand, within B158DRAFT_0582 at 589.177 kb on + strand, within B158DRAFT_0582 at 589.183 kb on - strand, within B158DRAFT_0582 at 589.183 kb on - strand, within B158DRAFT_0582 at 589.183 kb on - strand, within B158DRAFT_0582 at 589.183 kb on - strand, within B158DRAFT_0582 at 589.183 kb on - strand, within B158DRAFT_0582 at 589.185 kb on - strand, within B158DRAFT_0582 at 589.202 kb on + strand, within B158DRAFT_0582 at 589.210 kb on + strand, within B158DRAFT_0582 at 589.227 kb on - strand, within B158DRAFT_0582 at 589.273 kb on + strand at 589.276 kb on - strand at 589.277 kb on - strand at 589.278 kb on + strand at 589.278 kb on + strand at 589.286 kb on - strand at 589.418 kb on - strand at 589.432 kb on + strand at 589.440 kb on - strand at 589.440 kb on - strand at 589.457 kb on + strand at 589.457 kb on + strand at 589.458 kb on - strand at 589.465 kb on - strand at 589.465 kb on - strand at 589.509 kb on - strand at 589.557 kb on + strand, within B158DRAFT_0583 at 589.557 kb on + strand, within B158DRAFT_0583 at 589.640 kb on + strand, within B158DRAFT_0583 at 589.671 kb on + strand, within B158DRAFT_0583 at 589.721 kb on + strand, within B158DRAFT_0583 at 589.721 kb on + strand, within B158DRAFT_0583 at 589.726 kb on + strand, within B158DRAFT_0583 at 589.734 kb on - strand, within B158DRAFT_0583 at 589.734 kb on - strand, within B158DRAFT_0583 at 589.758 kb on + strand, within B158DRAFT_0583 at 589.788 kb on - strand, within B158DRAFT_0583 at 589.788 kb on - strand, within B158DRAFT_0583 at 589.788 kb on - strand, within B158DRAFT_0583 at 589.788 kb on - strand, within B158DRAFT_0583 at 589.794 kb on + strand, within B158DRAFT_0583 at 589.865 kb on + strand, within B158DRAFT_0583 at 589.873 kb on - strand, within B158DRAFT_0583 at 589.873 kb on - strand, within B158DRAFT_0583 at 589.873 kb on - strand, within B158DRAFT_0583 at 589.919 kb on - strand, within B158DRAFT_0583 at 589.993 kb on - strand, within B158DRAFT_0583 at 590.040 kb on + strand, within B158DRAFT_0583 at 590.083 kb on - strand, within B158DRAFT_0583 at 590.125 kb on - strand, within B158DRAFT_0583 at 590.183 kb on - strand, within B158DRAFT_0583 at 590.185 kb on - strand, within B158DRAFT_0583 at 590.195 kb on - strand at 590.381 kb on + strand, within B158DRAFT_0584 at 590.381 kb on + strand, within B158DRAFT_0584 at 590.381 kb on + strand, within B158DRAFT_0584 at 590.388 kb on + strand, within B158DRAFT_0584 at 590.388 kb on + strand, within B158DRAFT_0584 at 590.389 kb on - strand, within B158DRAFT_0584 at 590.389 kb on - strand, within B158DRAFT_0584 at 590.389 kb on - strand, within B158DRAFT_0584 at 590.389 kb on - strand, within B158DRAFT_0584 at 590.389 kb on - strand, within B158DRAFT_0584 at 590.389 kb on - strand, within B158DRAFT_0584 at 590.391 kb on - strand, within B158DRAFT_0584 at 590.391 kb on - strand, within B158DRAFT_0584 at 590.396 kb on - strand, within B158DRAFT_0584 at 590.396 kb on - strand, within B158DRAFT_0584 at 590.396 kb on - strand, within B158DRAFT_0584 at 590.396 kb on - strand, within B158DRAFT_0584 at 590.424 kb on + strand, within B158DRAFT_0584 at 590.424 kb on + strand, within B158DRAFT_0584 at 590.424 kb on + strand, within B158DRAFT_0584 at 590.424 kb on + strand, within B158DRAFT_0584 at 590.429 kb on + strand, within B158DRAFT_0584 at 590.429 kb on + strand, within B158DRAFT_0584 at 590.429 kb on + strand, within B158DRAFT_0584 at 590.437 kb on - strand, within B158DRAFT_0584 at 590.437 kb on - strand, within B158DRAFT_0584 at 590.437 kb on - strand, within B158DRAFT_0584 at 590.437 kb on - strand, within B158DRAFT_0584 at 590.437 kb on - strand, within B158DRAFT_0584 at 590.437 kb on - strand, within B158DRAFT_0584 at 590.442 kb on - strand, within B158DRAFT_0584 at 590.452 kb on + strand, within B158DRAFT_0584 at 590.460 kb on - strand, within B158DRAFT_0584 at 590.460 kb on - strand, within B158DRAFT_0584 at 590.520 kb on - strand, within B158DRAFT_0584 at 590.525 kb on + strand, within B158DRAFT_0584 at 590.535 kb on - strand, within B158DRAFT_0584 at 590.545 kb on - strand, within B158DRAFT_0584 at 590.554 kb on + strand, within B158DRAFT_0584 at 590.558 kb on - strand, within B158DRAFT_0584 at 590.568 kb on - strand, within B158DRAFT_0584 at 590.663 kb on - strand at 590.715 kb on - strand at 590.730 kb on + strand at 590.738 kb on - strand at 590.808 kb on + strand at 590.808 kb on + strand at 590.816 kb on - strand at 590.816 kb on - strand at 590.816 kb on - strand at 590.816 kb on - strand at 590.816 kb on - strand at 590.854 kb on + strand at 590.917 kb on - strand at 590.920 kb on + strand at 590.920 kb on + strand at 590.920 kb on + strand at 590.920 kb on + strand at 590.920 kb on + strand at 590.920 kb on + strand at 590.920 kb on + strand at 590.928 kb on - strand at 590.928 kb on - strand at 590.928 kb on - strand at 590.928 kb on - strand at 590.928 kb on - strand at 590.928 kb on - strand at 590.928 kb on - strand at 590.972 kb on - strand, within B158DRAFT_0585 at 591.017 kb on + strand, within B158DRAFT_0585 at 591.024 kb on + strand, within B158DRAFT_0585 at 591.078 kb on + strand, within B158DRAFT_0585 at 591.078 kb on + strand, within B158DRAFT_0585 at 591.078 kb on + strand, within B158DRAFT_0585 at 591.078 kb on + strand, within B158DRAFT_0585 at 591.086 kb on - strand, within B158DRAFT_0585 at 591.086 kb on - strand, within B158DRAFT_0585 at 591.086 kb on - strand, within B158DRAFT_0585 at 591.086 kb on - strand, within B158DRAFT_0585 at 591.086 kb on - strand, within B158DRAFT_0585 at 591.086 kb on - strand, within B158DRAFT_0585 at 591.086 kb on - strand, within B158DRAFT_0585 at 591.103 kb on + strand, within B158DRAFT_0585 at 591.132 kb on + strand, within B158DRAFT_0585 at 591.167 kb on - strand, within B158DRAFT_0585 at 591.190 kb on + strand, within B158DRAFT_0585 at 591.190 kb on + strand, within B158DRAFT_0585 at 591.198 kb on - strand, within B158DRAFT_0585 at 591.198 kb on - strand, within B158DRAFT_0585
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 30 mM remove 588,482 - +0.0 588,625 + B158DRAFT_0582 0.18 -0.2 588,661 + B158DRAFT_0582 0.23 +0.1 588,661 + B158DRAFT_0582 0.23 +0.6 588,730 - B158DRAFT_0582 0.31 +0.0 588,830 + B158DRAFT_0582 0.42 -0.5 588,920 - B158DRAFT_0582 0.52 -1.0 588,923 + B158DRAFT_0582 0.53 +0.0 588,923 + B158DRAFT_0582 0.53 +0.4 588,939 - B158DRAFT_0582 0.55 +0.1 588,980 + B158DRAFT_0582 0.59 +0.4 589,012 - B158DRAFT_0582 0.63 -0.7 589,013 + B158DRAFT_0582 0.63 -0.2 589,013 + B158DRAFT_0582 0.63 -0.3 589,021 - B158DRAFT_0582 0.64 +0.3 589,021 - B158DRAFT_0582 0.64 -0.1 589,021 - B158DRAFT_0582 0.64 +0.3 589,021 - B158DRAFT_0582 0.64 -0.1 589,021 - B158DRAFT_0582 0.64 +0.4 589,032 - B158DRAFT_0582 0.65 +0.2 589,093 + B158DRAFT_0582 0.72 -0.4 589,136 + B158DRAFT_0582 0.77 -0.0 589,136 + B158DRAFT_0582 0.77 -1.7 589,138 + B158DRAFT_0582 0.78 -0.6 589,144 - B158DRAFT_0582 0.78 +0.4 589,144 - B158DRAFT_0582 0.78 +0.3 589,146 - B158DRAFT_0582 0.79 +0.1 589,155 - B158DRAFT_0582 0.80 -0.1 589,170 + B158DRAFT_0582 0.81 -0.1 589,170 + B158DRAFT_0582 0.81 -0.7 589,175 + B158DRAFT_0582 0.82 +0.3 589,175 + B158DRAFT_0582 0.82 -0.1 589,175 + B158DRAFT_0582 0.82 +0.7 589,175 + B158DRAFT_0582 0.82 -1.5 589,175 + B158DRAFT_0582 0.82 +0.5 589,177 + B158DRAFT_0582 0.82 +0.1 589,183 - B158DRAFT_0582 0.83 -0.4 589,183 - B158DRAFT_0582 0.83 +0.1 589,183 - B158DRAFT_0582 0.83 +0.2 589,183 - B158DRAFT_0582 0.83 -3.6 589,183 - B158DRAFT_0582 0.83 +0.3 589,185 - B158DRAFT_0582 0.83 +0.2 589,202 + B158DRAFT_0582 0.85 +0.6 589,210 + B158DRAFT_0582 0.86 +0.3 589,227 - B158DRAFT_0582 0.88 +0.1 589,273 + +0.3 589,276 - -0.3 589,277 - +0.2 589,278 + -0.4 589,278 + +0.6 589,286 - +0.2 589,418 - +0.3 589,432 + -0.0 589,440 - -0.4 589,440 - -2.7 589,457 + -1.1 589,457 + -0.2 589,458 - -0.5 589,465 - +0.7 589,465 - -0.5 589,509 - -0.2 589,557 + B158DRAFT_0583 0.12 -1.1 589,557 + B158DRAFT_0583 0.12 +2.4 589,640 + B158DRAFT_0583 0.23 +0.0 589,671 + B158DRAFT_0583 0.26 -0.1 589,721 + B158DRAFT_0583 0.33 +0.5 589,721 + B158DRAFT_0583 0.33 +0.4 589,726 + B158DRAFT_0583 0.33 -0.3 589,734 - B158DRAFT_0583 0.34 -0.1 589,734 - B158DRAFT_0583 0.34 +0.0 589,758 + B158DRAFT_0583 0.37 +0.6 589,788 - B158DRAFT_0583 0.41 +0.3 589,788 - B158DRAFT_0583 0.41 -0.1 589,788 - B158DRAFT_0583 0.41 -0.2 589,788 - B158DRAFT_0583 0.41 +0.4 589,794 + B158DRAFT_0583 0.42 +0.1 589,865 + B158DRAFT_0583 0.50 -0.9 589,873 - B158DRAFT_0583 0.51 -0.1 589,873 - B158DRAFT_0583 0.51 -0.1 589,873 - B158DRAFT_0583 0.51 -0.7 589,919 - B158DRAFT_0583 0.57 -0.1 589,993 - B158DRAFT_0583 0.66 +0.6 590,040 + B158DRAFT_0583 0.72 +0.2 590,083 - B158DRAFT_0583 0.77 -0.8 590,125 - B158DRAFT_0583 0.82 -0.0 590,183 - B158DRAFT_0583 0.90 -0.2 590,185 - B158DRAFT_0583 0.90 +0.0 590,195 - -0.3 590,381 + B158DRAFT_0584 0.29 +0.2 590,381 + B158DRAFT_0584 0.29 +0.3 590,381 + B158DRAFT_0584 0.29 -0.0 590,388 + B158DRAFT_0584 0.31 -0.8 590,388 + B158DRAFT_0584 0.31 -1.0 590,389 - B158DRAFT_0584 0.31 -0.1 590,389 - B158DRAFT_0584 0.31 -0.3 590,389 - B158DRAFT_0584 0.31 +0.3 590,389 - B158DRAFT_0584 0.31 +0.7 590,389 - B158DRAFT_0584 0.31 -0.1 590,389 - B158DRAFT_0584 0.31 +0.1 590,391 - B158DRAFT_0584 0.31 -0.0 590,391 - B158DRAFT_0584 0.31 -0.5 590,396 - B158DRAFT_0584 0.33 +1.1 590,396 - B158DRAFT_0584 0.33 -0.3 590,396 - B158DRAFT_0584 0.33 -2.2 590,396 - B158DRAFT_0584 0.33 -0.2 590,424 + B158DRAFT_0584 0.40 -0.3 590,424 + B158DRAFT_0584 0.40 +0.2 590,424 + B158DRAFT_0584 0.40 -0.2 590,424 + B158DRAFT_0584 0.40 -0.0 590,429 + B158DRAFT_0584 0.42 +0.2 590,429 + B158DRAFT_0584 0.42 -0.7 590,429 + B158DRAFT_0584 0.42 +0.3 590,437 - B158DRAFT_0584 0.44 +1.0 590,437 - B158DRAFT_0584 0.44 -0.7 590,437 - B158DRAFT_0584 0.44 -0.3 590,437 - B158DRAFT_0584 0.44 +0.3 590,437 - B158DRAFT_0584 0.44 -0.1 590,437 - B158DRAFT_0584 0.44 -0.2 590,442 - B158DRAFT_0584 0.45 -0.4 590,452 + B158DRAFT_0584 0.48 -0.5 590,460 - B158DRAFT_0584 0.50 -0.2 590,460 - B158DRAFT_0584 0.50 -0.4 590,520 - B158DRAFT_0584 0.66 -0.2 590,525 + B158DRAFT_0584 0.67 -0.1 590,535 - B158DRAFT_0584 0.70 -0.1 590,545 - B158DRAFT_0584 0.72 -0.5 590,554 + B158DRAFT_0584 0.75 +0.0 590,558 - B158DRAFT_0584 0.76 -0.6 590,568 - B158DRAFT_0584 0.78 -0.2 590,663 - -0.3 590,715 - +0.2 590,730 + +0.1 590,738 - +0.4 590,808 + -0.4 590,808 + -2.4 590,816 - -0.7 590,816 - -0.0 590,816 - +0.2 590,816 - -0.1 590,816 - -0.5 590,854 + +0.6 590,917 - -2.4 590,920 + +0.0 590,920 + -0.3 590,920 + +0.1 590,920 + +0.9 590,920 + +0.0 590,920 + -0.2 590,920 + -0.1 590,928 - -0.5 590,928 - -0.3 590,928 - -1.4 590,928 - +0.0 590,928 - -0.4 590,928 - -0.1 590,928 - -0.9 590,972 - B158DRAFT_0585 0.14 -0.4 591,017 + B158DRAFT_0585 0.19 -0.2 591,024 + B158DRAFT_0585 0.20 +1.2 591,078 + B158DRAFT_0585 0.27 +0.1 591,078 + B158DRAFT_0585 0.27 -0.1 591,078 + B158DRAFT_0585 0.27 +0.3 591,078 + B158DRAFT_0585 0.27 -0.4 591,086 - B158DRAFT_0585 0.28 -0.3 591,086 - B158DRAFT_0585 0.28 -0.7 591,086 - B158DRAFT_0585 0.28 -0.2 591,086 - B158DRAFT_0585 0.28 -0.6 591,086 - B158DRAFT_0585 0.28 -0.2 591,086 - B158DRAFT_0585 0.28 +0.4 591,086 - B158DRAFT_0585 0.28 +0.0 591,103 + B158DRAFT_0585 0.30 +0.1 591,132 + B158DRAFT_0585 0.34 +0.1 591,167 - B158DRAFT_0585 0.38 -1.3 591,190 + B158DRAFT_0585 0.41 -1.0 591,190 + B158DRAFT_0585 0.41 +0.0 591,198 - B158DRAFT_0585 0.42 -1.2 591,198 - B158DRAFT_0585 0.42 -0.6
Or see this region's nucleotide sequence