Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0464

Experiment: m.b. sodium fluoride 30 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0463 and B158DRAFT_0464 are separated by 199 nucleotidesB158DRAFT_0464 and B158DRAFT_0465 are separated by 40 nucleotidesB158DRAFT_0465 and B158DRAFT_0466 are separated by 95 nucleotides B158DRAFT_0463: B158DRAFT_0463 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 464,958 to 467,390 _0463 B158DRAFT_0464: B158DRAFT_0464 - Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily, at 467,590 to 468,126 _0464 B158DRAFT_0465: B158DRAFT_0465 - Putative salt-induced outer membrane protein, at 468,167 to 468,901 _0465 B158DRAFT_0466: B158DRAFT_0466 - RmlD substrate binding domain., at 468,997 to 469,791 _0466 Position (kb) 467 468 469Strain fitness (log2 ratio) -2 -1 0 1at 466.598 kb on - strand, within B158DRAFT_0463at 466.611 kb on + strand, within B158DRAFT_0463at 466.619 kb on - strand, within B158DRAFT_0463at 466.619 kb on - strand, within B158DRAFT_0463at 466.879 kb on + strand, within B158DRAFT_0463at 466.879 kb on + strand, within B158DRAFT_0463at 466.887 kb on - strand, within B158DRAFT_0463at 466.887 kb on - strand, within B158DRAFT_0463at 466.919 kb on + strand, within B158DRAFT_0463at 466.921 kb on + strand, within B158DRAFT_0463at 466.927 kb on - strand, within B158DRAFT_0463at 466.929 kb on - strand, within B158DRAFT_0463at 466.946 kb on + strand, within B158DRAFT_0463at 467.086 kb on + strand, within B158DRAFT_0463at 467.135 kb on + strand, within B158DRAFT_0463at 467.135 kb on + strand, within B158DRAFT_0463at 467.135 kb on + strand, within B158DRAFT_0463at 467.135 kb on + strand, within B158DRAFT_0463at 467.143 kb on - strand, within B158DRAFT_0463at 467.191 kb on + strandat 467.191 kb on - strandat 467.211 kb on + strandat 467.219 kb on - strandat 467.219 kb on - strandat 467.240 kb on + strandat 467.240 kb on + strandat 467.240 kb on + strandat 467.240 kb on + strandat 467.255 kb on - strandat 467.255 kb on - strandat 467.255 kb on - strandat 467.266 kb on + strandat 467.266 kb on + strandat 467.266 kb on + strandat 467.266 kb on + strandat 467.266 kb on + strandat 467.266 kb on + strandat 467.266 kb on + strandat 467.274 kb on - strandat 467.274 kb on - strandat 467.274 kb on - strandat 467.274 kb on - strandat 467.274 kb on - strandat 467.274 kb on - strandat 467.274 kb on - strandat 467.274 kb on - strandat 467.274 kb on - strandat 467.274 kb on - strandat 467.298 kb on - strandat 467.316 kb on + strandat 467.316 kb on + strandat 467.316 kb on + strandat 467.324 kb on - strandat 467.324 kb on - strandat 467.385 kb on - strandat 467.408 kb on + strandat 467.417 kb on + strandat 467.449 kb on + strandat 467.538 kb on - strandat 467.542 kb on + strandat 467.550 kb on - strandat 467.550 kb on - strandat 467.552 kb on + strandat 467.552 kb on + strandat 467.552 kb on + strandat 467.552 kb on + strandat 467.552 kb on + strandat 467.578 kb on + strandat 467.578 kb on + strandat 467.578 kb on + strandat 467.578 kb on + strandat 468.093 kb on + strandat 468.229 kb on + strandat 468.317 kb on - strand, within B158DRAFT_0465at 468.442 kb on + strand, within B158DRAFT_0465at 468.455 kb on + strand, within B158DRAFT_0465at 468.579 kb on - strand, within B158DRAFT_0465at 468.620 kb on - strand, within B158DRAFT_0465at 468.629 kb on + strand, within B158DRAFT_0465at 468.629 kb on + strand, within B158DRAFT_0465at 468.630 kb on + strand, within B158DRAFT_0465at 468.638 kb on - strand, within B158DRAFT_0465at 468.638 kb on - strand, within B158DRAFT_0465at 468.743 kb on - strand, within B158DRAFT_0465at 468.750 kb on + strand, within B158DRAFT_0465at 468.750 kb on + strand, within B158DRAFT_0465at 468.758 kb on - strand, within B158DRAFT_0465at 468.765 kb on + strand, within B158DRAFT_0465at 468.781 kb on - strand, within B158DRAFT_0465at 468.781 kb on - strand, within B158DRAFT_0465at 468.781 kb on - strand, within B158DRAFT_0465at 468.797 kb on + strand, within B158DRAFT_0465at 468.798 kb on + strand, within B158DRAFT_0465at 468.805 kb on - strand, within B158DRAFT_0465at 468.805 kb on - strand, within B158DRAFT_0465at 468.805 kb on - strand, within B158DRAFT_0465at 468.842 kb on + strandat 469.107 kb on - strand, within B158DRAFT_0466

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. sodium fluoride 30 mM
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466,598 - B158DRAFT_0463 0.67 +0.2
466,611 + B158DRAFT_0463 0.68 -0.1
466,619 - B158DRAFT_0463 0.68 +0.1
466,619 - B158DRAFT_0463 0.68 +0.0
466,879 + B158DRAFT_0463 0.79 -0.2
466,879 + B158DRAFT_0463 0.79 +0.6
466,887 - B158DRAFT_0463 0.79 -0.2
466,887 - B158DRAFT_0463 0.79 +0.7
466,919 + B158DRAFT_0463 0.81 -0.3
466,921 + B158DRAFT_0463 0.81 -0.1
466,927 - B158DRAFT_0463 0.81 -0.2
466,929 - B158DRAFT_0463 0.81 -0.0
466,946 + B158DRAFT_0463 0.82 +0.1
467,086 + B158DRAFT_0463 0.87 -0.2
467,135 + B158DRAFT_0463 0.89 +0.2
467,135 + B158DRAFT_0463 0.89 -0.3
467,135 + B158DRAFT_0463 0.89 -0.2
467,135 + B158DRAFT_0463 0.89 -0.0
467,143 - B158DRAFT_0463 0.90 -0.0
467,191 + -0.1
467,191 - -0.5
467,211 + +0.1
467,219 - -0.3
467,219 - -0.3
467,240 + -0.0
467,240 + -0.1
467,240 + +0.0
467,240 + -0.1
467,255 - -0.3
467,255 - -0.1
467,255 - +0.0
467,266 + -1.1
467,266 + +0.1
467,266 + -0.8
467,266 + -0.7
467,266 + -0.1
467,266 + +0.4
467,266 + -0.1
467,274 - -0.2
467,274 - -0.2
467,274 - -0.2
467,274 - +0.2
467,274 - +0.1
467,274 - +0.9
467,274 - -0.1
467,274 - +0.2
467,274 - +0.3
467,274 - -0.3
467,298 - -0.2
467,316 + -0.1
467,316 + -0.1
467,316 + -0.1
467,324 - +0.8
467,324 - -0.8
467,385 - -0.0
467,408 + +0.2
467,417 + -0.1
467,449 + +0.2
467,538 - -0.3
467,542 + -0.1
467,550 - +0.1
467,550 - +0.2
467,552 + -0.2
467,552 + +0.2
467,552 + +0.9
467,552 + -0.3
467,552 + +0.4
467,578 + +0.2
467,578 + -0.6
467,578 + +0.2
467,578 + -0.5
468,093 + -0.1
468,229 + -0.3
468,317 - B158DRAFT_0465 0.20 -0.1
468,442 + B158DRAFT_0465 0.37 -0.7
468,455 + B158DRAFT_0465 0.39 -1.3
468,579 - B158DRAFT_0465 0.56 +0.2
468,620 - B158DRAFT_0465 0.62 -0.3
468,629 + B158DRAFT_0465 0.63 -1.3
468,629 + B158DRAFT_0465 0.63 -0.3
468,630 + B158DRAFT_0465 0.63 +0.2
468,638 - B158DRAFT_0465 0.64 -1.8
468,638 - B158DRAFT_0465 0.64 +0.1
468,743 - B158DRAFT_0465 0.78 -0.2
468,750 + B158DRAFT_0465 0.79 +0.0
468,750 + B158DRAFT_0465 0.79 -0.2
468,758 - B158DRAFT_0465 0.80 -0.3
468,765 + B158DRAFT_0465 0.81 -0.4
468,781 - B158DRAFT_0465 0.84 +0.4
468,781 - B158DRAFT_0465 0.84 -0.0
468,781 - B158DRAFT_0465 0.84 +0.9
468,797 + B158DRAFT_0465 0.86 +1.1
468,798 + B158DRAFT_0465 0.86 -0.2
468,805 - B158DRAFT_0465 0.87 -0.7
468,805 - B158DRAFT_0465 0.87 -0.2
468,805 - B158DRAFT_0465 0.87 +0.7
468,842 + -0.8
469,107 - B158DRAFT_0466 0.14 -0.3

Or see this region's nucleotide sequence