Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0204

Experiment: m.b. sodium fluoride 30 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0203 and B158DRAFT_0204 are separated by 172 nucleotidesB158DRAFT_0204 and B158DRAFT_0205 are separated by 11 nucleotides B158DRAFT_0203: B158DRAFT_0203 - tRNA (guanine-N(7)-)-methyltransferase, at 208,556 to 209,257 _0203 B158DRAFT_0204: B158DRAFT_0204 - Di- and tricarboxylate transporters, at 209,430 to 211,259 _0204 B158DRAFT_0205: B158DRAFT_0205 - A/G-specific DNA-adenine glycosylase (EC 3.2.2.-), at 211,271 to 212,326 _0205 Position (kb) 209 210 211 212Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 208.430 kb on - strandat 208.430 kb on - strandat 208.591 kb on + strandat 208.599 kb on - strandat 208.606 kb on - strandat 208.636 kb on + strand, within B158DRAFT_0203at 208.709 kb on + strand, within B158DRAFT_0203at 208.727 kb on - strand, within B158DRAFT_0203at 208.958 kb on + strand, within B158DRAFT_0203at 208.961 kb on - strand, within B158DRAFT_0203at 208.965 kb on - strand, within B158DRAFT_0203at 208.965 kb on - strand, within B158DRAFT_0203at 208.965 kb on - strand, within B158DRAFT_0203at 208.980 kb on + strand, within B158DRAFT_0203at 208.980 kb on + strand, within B158DRAFT_0203at 209.022 kb on + strand, within B158DRAFT_0203at 209.022 kb on + strand, within B158DRAFT_0203at 209.022 kb on + strand, within B158DRAFT_0203at 209.030 kb on - strand, within B158DRAFT_0203at 209.051 kb on - strand, within B158DRAFT_0203at 209.178 kb on - strand, within B158DRAFT_0203at 209.200 kb on + strandat 209.200 kb on + strandat 209.200 kb on + strandat 209.325 kb on + strandat 209.325 kb on + strandat 209.333 kb on - strandat 209.333 kb on - strandat 209.372 kb on + strandat 209.388 kb on - strandat 209.561 kb on - strandat 209.561 kb on - strandat 209.568 kb on - strandat 209.580 kb on - strandat 209.611 kb on - strandat 209.618 kb on - strand, within B158DRAFT_0204at 209.696 kb on - strand, within B158DRAFT_0204at 209.701 kb on - strand, within B158DRAFT_0204at 209.709 kb on - strand, within B158DRAFT_0204at 209.883 kb on + strand, within B158DRAFT_0204at 209.891 kb on - strand, within B158DRAFT_0204at 209.891 kb on - strand, within B158DRAFT_0204at 209.965 kb on - strand, within B158DRAFT_0204at 210.010 kb on + strand, within B158DRAFT_0204at 210.060 kb on - strand, within B158DRAFT_0204at 210.206 kb on + strand, within B158DRAFT_0204at 210.206 kb on + strand, within B158DRAFT_0204at 210.206 kb on + strand, within B158DRAFT_0204at 210.206 kb on + strand, within B158DRAFT_0204at 210.214 kb on - strand, within B158DRAFT_0204at 210.214 kb on - strand, within B158DRAFT_0204at 210.277 kb on - strand, within B158DRAFT_0204at 210.279 kb on + strand, within B158DRAFT_0204at 210.314 kb on - strand, within B158DRAFT_0204at 210.371 kb on - strand, within B158DRAFT_0204at 210.383 kb on + strand, within B158DRAFT_0204at 210.427 kb on + strand, within B158DRAFT_0204at 210.433 kb on + strand, within B158DRAFT_0204at 210.448 kb on + strand, within B158DRAFT_0204at 210.454 kb on + strand, within B158DRAFT_0204at 210.495 kb on - strand, within B158DRAFT_0204at 210.501 kb on + strand, within B158DRAFT_0204at 210.501 kb on + strand, within B158DRAFT_0204at 210.501 kb on + strand, within B158DRAFT_0204at 210.509 kb on - strand, within B158DRAFT_0204at 210.513 kb on + strand, within B158DRAFT_0204at 210.536 kb on + strand, within B158DRAFT_0204at 210.538 kb on + strand, within B158DRAFT_0204at 210.543 kb on + strand, within B158DRAFT_0204at 210.544 kb on - strand, within B158DRAFT_0204at 210.546 kb on - strand, within B158DRAFT_0204at 210.551 kb on - strand, within B158DRAFT_0204at 210.559 kb on + strand, within B158DRAFT_0204at 210.652 kb on + strand, within B158DRAFT_0204at 210.745 kb on - strand, within B158DRAFT_0204at 210.763 kb on + strand, within B158DRAFT_0204at 210.778 kb on + strand, within B158DRAFT_0204at 210.903 kb on + strand, within B158DRAFT_0204at 210.926 kb on + strand, within B158DRAFT_0204at 210.928 kb on + strand, within B158DRAFT_0204at 210.944 kb on - strand, within B158DRAFT_0204at 211.065 kb on + strand, within B158DRAFT_0204at 211.073 kb on - strand, within B158DRAFT_0204at 211.086 kb on + strandat 211.091 kb on + strandat 211.101 kb on + strandat 211.101 kb on + strandat 211.116 kb on + strandat 211.216 kb on + strandat 211.216 kb on + strandat 211.216 kb on + strandat 211.216 kb on + strandat 211.216 kb on + strandat 211.216 kb on + strandat 211.216 kb on + strandat 211.216 kb on + strandat 211.216 kb on + strandat 211.224 kb on - strandat 211.224 kb on - strandat 211.224 kb on - strandat 211.224 kb on - strandat 211.226 kb on + strandat 211.236 kb on - strandat 211.253 kb on + strandat 211.261 kb on - strandat 211.261 kb on - strandat 211.270 kb on + strandat 211.270 kb on + strandat 211.278 kb on - strandat 211.310 kb on - strandat 211.326 kb on - strandat 211.351 kb on - strandat 211.409 kb on + strand, within B158DRAFT_0205at 211.464 kb on + strand, within B158DRAFT_0205at 211.464 kb on + strand, within B158DRAFT_0205at 211.466 kb on + strand, within B158DRAFT_0205at 211.472 kb on - strand, within B158DRAFT_0205at 211.474 kb on - strand, within B158DRAFT_0205at 211.474 kb on - strand, within B158DRAFT_0205at 211.502 kb on + strand, within B158DRAFT_0205at 211.549 kb on + strand, within B158DRAFT_0205at 211.557 kb on - strand, within B158DRAFT_0205at 211.557 kb on - strand, within B158DRAFT_0205at 211.557 kb on - strand, within B158DRAFT_0205at 211.557 kb on - strand, within B158DRAFT_0205at 211.557 kb on - strand, within B158DRAFT_0205at 211.609 kb on - strand, within B158DRAFT_0205at 211.610 kb on - strand, within B158DRAFT_0205at 211.613 kb on + strand, within B158DRAFT_0205at 211.621 kb on - strand, within B158DRAFT_0205at 211.621 kb on - strand, within B158DRAFT_0205at 211.621 kb on - strand, within B158DRAFT_0205at 211.629 kb on + strand, within B158DRAFT_0205at 211.678 kb on + strand, within B158DRAFT_0205at 211.686 kb on - strand, within B158DRAFT_0205at 211.710 kb on - strand, within B158DRAFT_0205at 211.710 kb on - strand, within B158DRAFT_0205at 211.733 kb on + strand, within B158DRAFT_0205at 211.733 kb on + strand, within B158DRAFT_0205at 211.743 kb on + strand, within B158DRAFT_0205at 211.768 kb on - strand, within B158DRAFT_0205at 211.797 kb on + strand, within B158DRAFT_0205at 211.817 kb on + strand, within B158DRAFT_0205at 211.817 kb on + strand, within B158DRAFT_0205at 211.817 kb on + strand, within B158DRAFT_0205at 211.817 kb on + strand, within B158DRAFT_0205at 211.873 kb on + strand, within B158DRAFT_0205at 211.873 kb on + strand, within B158DRAFT_0205at 211.878 kb on + strand, within B158DRAFT_0205at 211.881 kb on - strand, within B158DRAFT_0205at 211.886 kb on - strand, within B158DRAFT_0205at 211.941 kb on - strand, within B158DRAFT_0205at 211.998 kb on - strand, within B158DRAFT_0205at 212.028 kb on - strand, within B158DRAFT_0205at 212.034 kb on + strand, within B158DRAFT_0205at 212.041 kb on + strand, within B158DRAFT_0205at 212.046 kb on + strand, within B158DRAFT_0205at 212.046 kb on + strand, within B158DRAFT_0205at 212.053 kb on + strand, within B158DRAFT_0205at 212.053 kb on + strand, within B158DRAFT_0205at 212.054 kb on - strand, within B158DRAFT_0205at 212.054 kb on - strand, within B158DRAFT_0205at 212.061 kb on - strand, within B158DRAFT_0205at 212.061 kb on - strand, within B158DRAFT_0205at 212.061 kb on - strand, within B158DRAFT_0205at 212.086 kb on + strand, within B158DRAFT_0205at 212.091 kb on + strand, within B158DRAFT_0205at 212.099 kb on - strand, within B158DRAFT_0205at 212.162 kb on + strand, within B158DRAFT_0205at 212.162 kb on + strand, within B158DRAFT_0205at 212.170 kb on - strand, within B158DRAFT_0205at 212.180 kb on - strand, within B158DRAFT_0205at 212.221 kb on + strandat 212.244 kb on + strandat 212.252 kb on - strandat 212.252 kb on - strandat 212.258 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. sodium fluoride 30 mM
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208,430 - +0.1
208,430 - -0.0
208,591 + +0.5
208,599 - -0.6
208,606 - +0.5
208,636 + B158DRAFT_0203 0.11 +0.4
208,709 + B158DRAFT_0203 0.22 +0.7
208,727 - B158DRAFT_0203 0.24 +0.2
208,958 + B158DRAFT_0203 0.57 +0.2
208,961 - B158DRAFT_0203 0.58 -1.0
208,965 - B158DRAFT_0203 0.58 +0.1
208,965 - B158DRAFT_0203 0.58 +0.1
208,965 - B158DRAFT_0203 0.58 +0.4
208,980 + B158DRAFT_0203 0.60 -0.9
208,980 + B158DRAFT_0203 0.60 +0.5
209,022 + B158DRAFT_0203 0.66 +0.2
209,022 + B158DRAFT_0203 0.66 -0.1
209,022 + B158DRAFT_0203 0.66 +0.0
209,030 - B158DRAFT_0203 0.68 +0.8
209,051 - B158DRAFT_0203 0.71 -0.0
209,178 - B158DRAFT_0203 0.89 -0.8
209,200 + +0.2
209,200 + +0.2
209,200 + +0.3
209,325 + +0.4
209,325 + -0.2
209,333 - +0.2
209,333 - +0.2
209,372 + -1.2
209,388 - -1.6
209,561 - -2.1
209,561 - -1.3
209,568 - -2.6
209,580 - -3.3
209,611 - -0.4
209,618 - B158DRAFT_0204 0.10 -1.4
209,696 - B158DRAFT_0204 0.15 -2.6
209,701 - B158DRAFT_0204 0.15 -1.3
209,709 - B158DRAFT_0204 0.15 -1.4
209,883 + B158DRAFT_0204 0.25 -2.1
209,891 - B158DRAFT_0204 0.25 -1.6
209,891 - B158DRAFT_0204 0.25 +1.6
209,965 - B158DRAFT_0204 0.29 -2.9
210,010 + B158DRAFT_0204 0.32 -2.0
210,060 - B158DRAFT_0204 0.34 -0.0
210,206 + B158DRAFT_0204 0.42 -1.3
210,206 + B158DRAFT_0204 0.42 -3.5
210,206 + B158DRAFT_0204 0.42 -1.6
210,206 + B158DRAFT_0204 0.42 -2.3
210,214 - B158DRAFT_0204 0.43 -1.7
210,214 - B158DRAFT_0204 0.43 -1.2
210,277 - B158DRAFT_0204 0.46 -1.3
210,279 + B158DRAFT_0204 0.46 -2.8
210,314 - B158DRAFT_0204 0.48 -2.4
210,371 - B158DRAFT_0204 0.51 -1.2
210,383 + B158DRAFT_0204 0.52 -1.4
210,427 + B158DRAFT_0204 0.54 -1.6
210,433 + B158DRAFT_0204 0.55 -2.3
210,448 + B158DRAFT_0204 0.56 -0.4
210,454 + B158DRAFT_0204 0.56 -3.1
210,495 - B158DRAFT_0204 0.58 -4.0
210,501 + B158DRAFT_0204 0.59 -2.0
210,501 + B158DRAFT_0204 0.59 -1.4
210,501 + B158DRAFT_0204 0.59 -1.6
210,509 - B158DRAFT_0204 0.59 -1.6
210,513 + B158DRAFT_0204 0.59 -3.4
210,536 + B158DRAFT_0204 0.60 -1.4
210,538 + B158DRAFT_0204 0.61 -3.1
210,543 + B158DRAFT_0204 0.61 -0.0
210,544 - B158DRAFT_0204 0.61 -1.0
210,546 - B158DRAFT_0204 0.61 -1.4
210,551 - B158DRAFT_0204 0.61 -2.1
210,559 + B158DRAFT_0204 0.62 -1.8
210,652 + B158DRAFT_0204 0.67 -1.3
210,745 - B158DRAFT_0204 0.72 -1.3
210,763 + B158DRAFT_0204 0.73 -1.5
210,778 + B158DRAFT_0204 0.74 -1.0
210,903 + B158DRAFT_0204 0.80 -0.0
210,926 + B158DRAFT_0204 0.82 -2.7
210,928 + B158DRAFT_0204 0.82 -0.8
210,944 - B158DRAFT_0204 0.83 -1.9
211,065 + B158DRAFT_0204 0.89 -1.4
211,073 - B158DRAFT_0204 0.90 -1.4
211,086 + -1.1
211,091 + -1.9
211,101 + -2.4
211,101 + -2.9
211,116 + -2.1
211,216 + -2.2
211,216 + -1.1
211,216 + -1.2
211,216 + -1.6
211,216 + -3.3
211,216 + -1.6
211,216 + -0.7
211,216 + -2.6
211,216 + -1.9
211,224 - -2.0
211,224 - -0.7
211,224 - -0.3
211,224 - -1.5
211,226 + -1.5
211,236 - -1.2
211,253 + -0.5
211,261 - -0.3
211,261 - +0.2
211,270 + +0.1
211,270 + +0.2
211,278 - -0.3
211,310 - +0.0
211,326 - -0.0
211,351 - +0.1
211,409 + B158DRAFT_0205 0.13 -0.1
211,464 + B158DRAFT_0205 0.18 -1.2
211,464 + B158DRAFT_0205 0.18 +0.4
211,466 + B158DRAFT_0205 0.18 -0.4
211,472 - B158DRAFT_0205 0.19 +0.3
211,474 - B158DRAFT_0205 0.19 +0.2
211,474 - B158DRAFT_0205 0.19 -0.8
211,502 + B158DRAFT_0205 0.22 +0.4
211,549 + B158DRAFT_0205 0.26 +0.1
211,557 - B158DRAFT_0205 0.27 -0.2
211,557 - B158DRAFT_0205 0.27 +0.2
211,557 - B158DRAFT_0205 0.27 +0.3
211,557 - B158DRAFT_0205 0.27 +0.0
211,557 - B158DRAFT_0205 0.27 -0.4
211,609 - B158DRAFT_0205 0.32 -0.4
211,610 - B158DRAFT_0205 0.32 -0.2
211,613 + B158DRAFT_0205 0.32 -0.2
211,621 - B158DRAFT_0205 0.33 -0.1
211,621 - B158DRAFT_0205 0.33 -0.8
211,621 - B158DRAFT_0205 0.33 -0.2
211,629 + B158DRAFT_0205 0.34 -0.5
211,678 + B158DRAFT_0205 0.39 +0.2
211,686 - B158DRAFT_0205 0.39 +0.6
211,710 - B158DRAFT_0205 0.42 +0.2
211,710 - B158DRAFT_0205 0.42 -0.1
211,733 + B158DRAFT_0205 0.44 -0.3
211,733 + B158DRAFT_0205 0.44 +0.3
211,743 + B158DRAFT_0205 0.45 +0.2
211,768 - B158DRAFT_0205 0.47 -0.6
211,797 + B158DRAFT_0205 0.50 -0.0
211,817 + B158DRAFT_0205 0.52 -0.1
211,817 + B158DRAFT_0205 0.52 -0.6
211,817 + B158DRAFT_0205 0.52 -0.2
211,817 + B158DRAFT_0205 0.52 +0.1
211,873 + B158DRAFT_0205 0.57 +0.2
211,873 + B158DRAFT_0205 0.57 -0.1
211,878 + B158DRAFT_0205 0.57 +0.4
211,881 - B158DRAFT_0205 0.58 +0.1
211,886 - B158DRAFT_0205 0.58 -0.6
211,941 - B158DRAFT_0205 0.63 +0.0
211,998 - B158DRAFT_0205 0.69 +0.2
212,028 - B158DRAFT_0205 0.72 +0.1
212,034 + B158DRAFT_0205 0.72 -3.8
212,041 + B158DRAFT_0205 0.73 -0.2
212,046 + B158DRAFT_0205 0.73 -0.3
212,046 + B158DRAFT_0205 0.73 -0.2
212,053 + B158DRAFT_0205 0.74 -2.4
212,053 + B158DRAFT_0205 0.74 -0.2
212,054 - B158DRAFT_0205 0.74 -0.2
212,054 - B158DRAFT_0205 0.74 -0.3
212,061 - B158DRAFT_0205 0.75 -0.1
212,061 - B158DRAFT_0205 0.75 -0.3
212,061 - B158DRAFT_0205 0.75 -0.6
212,086 + B158DRAFT_0205 0.77 +0.6
212,091 + B158DRAFT_0205 0.78 +0.1
212,099 - B158DRAFT_0205 0.78 -0.2
212,162 + B158DRAFT_0205 0.84 -0.6
212,162 + B158DRAFT_0205 0.84 -0.2
212,170 - B158DRAFT_0205 0.85 -0.2
212,180 - B158DRAFT_0205 0.86 -0.0
212,221 + -0.4
212,244 + -0.4
212,252 - +0.4
212,252 - +0.8
212,258 - +0.3

Or see this region's nucleotide sequence