Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2542

Experiment: m.b. Tetracycline 0.4 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2540 and B158DRAFT_2541 are separated by 57 nucleotidesB158DRAFT_2541 and B158DRAFT_2542 are separated by 183 nucleotides B158DRAFT_2540: B158DRAFT_2540 - hypothetical protein, at 730,657 to 731,133 _2540 B158DRAFT_2541: B158DRAFT_2541 - Protein of unknown function (DUF3579)., at 731,191 to 731,472 _2541 B158DRAFT_2542: B158DRAFT_2542 - Phosphatidylserine synthase, at 731,656 to 732,459 _2542 Position (kb) 731 732 733Strain fitness (log2 ratio) -2 -1 0 1 2at 730.719 kb on + strand, within B158DRAFT_2540at 730.719 kb on + strand, within B158DRAFT_2540at 730.727 kb on - strand, within B158DRAFT_2540at 730.898 kb on + strand, within B158DRAFT_2540at 730.914 kb on - strand, within B158DRAFT_2540at 730.939 kb on + strand, within B158DRAFT_2540at 731.064 kb on - strand, within B158DRAFT_2540at 731.074 kb on - strand, within B158DRAFT_2540at 731.089 kb on - strandat 731.236 kb on + strand, within B158DRAFT_2541at 731.255 kb on + strand, within B158DRAFT_2541at 731.263 kb on - strand, within B158DRAFT_2541at 731.273 kb on - strand, within B158DRAFT_2541at 731.273 kb on - strand, within B158DRAFT_2541at 731.299 kb on + strand, within B158DRAFT_2541at 731.299 kb on + strand, within B158DRAFT_2541at 731.299 kb on - strand, within B158DRAFT_2541at 731.307 kb on - strand, within B158DRAFT_2541at 731.336 kb on + strand, within B158DRAFT_2541at 731.336 kb on + strand, within B158DRAFT_2541at 731.336 kb on + strand, within B158DRAFT_2541at 731.339 kb on - strand, within B158DRAFT_2541at 731.402 kb on + strand, within B158DRAFT_2541at 731.402 kb on + strand, within B158DRAFT_2541at 731.405 kb on - strand, within B158DRAFT_2541at 731.410 kb on - strand, within B158DRAFT_2541at 731.411 kb on - strand, within B158DRAFT_2541at 731.455 kb on + strandat 731.463 kb on - strandat 731.493 kb on + strandat 731.527 kb on + strandat 731.573 kb on - strandat 731.575 kb on + strandat 731.575 kb on + strandat 731.583 kb on - strandat 731.596 kb on + strandat 731.596 kb on + strandat 731.596 kb on + strandat 731.606 kb on + strandat 731.606 kb on + strandat 732.362 kb on + strand, within B158DRAFT_2542at 732.399 kb on + strandat 732.471 kb on - strandat 732.471 kb on - strandat 732.471 kb on - strandat 732.491 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.4 mg/ml
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730,719 + B158DRAFT_2540 0.13 +0.2
730,719 + B158DRAFT_2540 0.13 -0.8
730,727 - B158DRAFT_2540 0.15 +0.1
730,898 + B158DRAFT_2540 0.51 -2.2
730,914 - B158DRAFT_2540 0.54 -1.1
730,939 + B158DRAFT_2540 0.59 +0.0
731,064 - B158DRAFT_2540 0.85 +0.2
731,074 - B158DRAFT_2540 0.87 -0.6
731,089 - +0.5
731,236 + B158DRAFT_2541 0.16 +0.0
731,255 + B158DRAFT_2541 0.23 -0.5
731,263 - B158DRAFT_2541 0.26 -0.1
731,273 - B158DRAFT_2541 0.29 -0.4
731,273 - B158DRAFT_2541 0.29 -0.2
731,299 + B158DRAFT_2541 0.38 -0.4
731,299 + B158DRAFT_2541 0.38 -0.1
731,299 - B158DRAFT_2541 0.38 -0.3
731,307 - B158DRAFT_2541 0.41 -0.5
731,336 + B158DRAFT_2541 0.51 +0.1
731,336 + B158DRAFT_2541 0.51 -1.8
731,336 + B158DRAFT_2541 0.51 -0.2
731,339 - B158DRAFT_2541 0.52 -0.5
731,402 + B158DRAFT_2541 0.75 -0.2
731,402 + B158DRAFT_2541 0.75 +0.0
731,405 - B158DRAFT_2541 0.76 +0.0
731,410 - B158DRAFT_2541 0.78 -1.0
731,411 - B158DRAFT_2541 0.78 +0.1
731,455 + -0.4
731,463 - +0.3
731,493 + +0.9
731,527 + +0.4
731,573 - +0.7
731,575 + -0.7
731,575 + -0.6
731,583 - +0.1
731,596 + +1.9
731,596 + +0.5
731,596 + -0.4
731,606 + -0.6
731,606 + +0.4
732,362 + B158DRAFT_2542 0.88 -0.5
732,399 + -0.9
732,471 - -0.2
732,471 - -0.1
732,471 - +0.1
732,491 - -0.6

Or see this region's nucleotide sequence