Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2491

Experiment: m.b. Tetracycline 0.4 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2488 and B158DRAFT_2489 are separated by 58 nucleotidesB158DRAFT_2489 and B158DRAFT_2490 are separated by 115 nucleotidesB158DRAFT_2490 and B158DRAFT_2491 are separated by 40 nucleotidesB158DRAFT_2491 and B158DRAFT_2492 are separated by 21 nucleotides B158DRAFT_2488: B158DRAFT_2488 - hypothetical protein, at 671,104 to 671,628 _2488 B158DRAFT_2489: B158DRAFT_2489 - hypothetical protein, at 671,687 to 671,800 _2489 B158DRAFT_2490: B158DRAFT_2490 - Adenylate kinase (EC 2.7.4.3), at 671,916 to 672,572 _2490 B158DRAFT_2491: B158DRAFT_2491 - ferrochelatase (EC 4.99.1.1), at 672,613 to 673,605 _2491 B158DRAFT_2492: B158DRAFT_2492 - Rad3-related DNA helicases, at 673,627 to 675,588 _2492 Position (kb) 672 673 674Strain fitness (log2 ratio) -2 -1 0 1 2 3at 671.642 kb on + strandat 671.642 kb on + strandat 671.750 kb on + strand, within B158DRAFT_2489at 672.581 kb on + strandat 673.656 kb on + strandat 673.671 kb on + strandat 673.694 kb on + strandat 673.702 kb on - strandat 673.706 kb on + strandat 673.724 kb on - strandat 673.767 kb on - strandat 673.777 kb on - strandat 673.777 kb on - strandat 673.792 kb on + strandat 673.827 kb on + strand, within B158DRAFT_2492at 673.854 kb on - strand, within B158DRAFT_2492at 673.925 kb on - strand, within B158DRAFT_2492at 673.927 kb on + strand, within B158DRAFT_2492at 674.035 kb on + strand, within B158DRAFT_2492at 674.035 kb on - strand, within B158DRAFT_2492at 674.063 kb on + strand, within B158DRAFT_2492at 674.068 kb on + strand, within B158DRAFT_2492at 674.068 kb on + strand, within B158DRAFT_2492at 674.075 kb on + strand, within B158DRAFT_2492at 674.075 kb on + strand, within B158DRAFT_2492at 674.076 kb on + strand, within B158DRAFT_2492at 674.076 kb on - strand, within B158DRAFT_2492at 674.083 kb on - strand, within B158DRAFT_2492at 674.083 kb on - strand, within B158DRAFT_2492at 674.084 kb on - strand, within B158DRAFT_2492at 674.099 kb on + strand, within B158DRAFT_2492at 674.099 kb on + strand, within B158DRAFT_2492at 674.107 kb on - strand, within B158DRAFT_2492at 674.107 kb on - strand, within B158DRAFT_2492at 674.107 kb on - strand, within B158DRAFT_2492at 674.123 kb on - strand, within B158DRAFT_2492at 674.125 kb on + strand, within B158DRAFT_2492at 674.125 kb on + strand, within B158DRAFT_2492at 674.125 kb on + strand, within B158DRAFT_2492at 674.129 kb on + strand, within B158DRAFT_2492at 674.129 kb on + strand, within B158DRAFT_2492at 674.133 kb on - strand, within B158DRAFT_2492at 674.133 kb on - strand, within B158DRAFT_2492at 674.133 kb on - strand, within B158DRAFT_2492at 674.133 kb on - strand, within B158DRAFT_2492at 674.137 kb on - strand, within B158DRAFT_2492at 674.137 kb on - strand, within B158DRAFT_2492at 674.137 kb on - strand, within B158DRAFT_2492at 674.174 kb on + strand, within B158DRAFT_2492at 674.354 kb on - strand, within B158DRAFT_2492at 674.377 kb on + strand, within B158DRAFT_2492at 674.377 kb on + strand, within B158DRAFT_2492at 674.377 kb on + strand, within B158DRAFT_2492at 674.385 kb on - strand, within B158DRAFT_2492at 674.385 kb on - strand, within B158DRAFT_2492at 674.385 kb on - strand, within B158DRAFT_2492at 674.385 kb on - strand, within B158DRAFT_2492at 674.385 kb on - strand, within B158DRAFT_2492at 674.421 kb on + strand, within B158DRAFT_2492at 674.428 kb on + strand, within B158DRAFT_2492at 674.428 kb on + strand, within B158DRAFT_2492at 674.429 kb on - strand, within B158DRAFT_2492at 674.436 kb on - strand, within B158DRAFT_2492at 674.500 kb on + strand, within B158DRAFT_2492at 674.510 kb on + strand, within B158DRAFT_2492at 674.510 kb on + strand, within B158DRAFT_2492at 674.510 kb on + strand, within B158DRAFT_2492at 674.510 kb on + strand, within B158DRAFT_2492at 674.510 kb on + strand, within B158DRAFT_2492at 674.510 kb on + strand, within B158DRAFT_2492at 674.510 kb on + strand, within B158DRAFT_2492at 674.510 kb on + strand, within B158DRAFT_2492at 674.510 kb on + strand, within B158DRAFT_2492at 674.518 kb on - strand, within B158DRAFT_2492at 674.518 kb on - strand, within B158DRAFT_2492at 674.518 kb on - strand, within B158DRAFT_2492at 674.518 kb on - strand, within B158DRAFT_2492at 674.602 kb on + strand, within B158DRAFT_2492at 674.605 kb on + strand, within B158DRAFT_2492at 674.605 kb on + strand, within B158DRAFT_2492

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.4 mg/ml
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671,642 + -0.5
671,642 + +0.1
671,750 + B158DRAFT_2489 0.55 +0.5
672,581 + -0.2
673,656 + +0.3
673,671 + -0.0
673,694 + -0.5
673,702 - +0.6
673,706 + -0.7
673,724 - -0.2
673,767 - +0.1
673,777 - -1.0
673,777 - +0.3
673,792 + -1.1
673,827 + B158DRAFT_2492 0.10 +0.4
673,854 - B158DRAFT_2492 0.12 -0.3
673,925 - B158DRAFT_2492 0.15 -0.0
673,927 + B158DRAFT_2492 0.15 -0.4
674,035 + B158DRAFT_2492 0.21 +1.5
674,035 - B158DRAFT_2492 0.21 +0.2
674,063 + B158DRAFT_2492 0.22 -0.2
674,068 + B158DRAFT_2492 0.22 +0.4
674,068 + B158DRAFT_2492 0.22 -1.8
674,075 + B158DRAFT_2492 0.23 -0.4
674,075 + B158DRAFT_2492 0.23 -0.7
674,076 + B158DRAFT_2492 0.23 +0.8
674,076 - B158DRAFT_2492 0.23 +1.2
674,083 - B158DRAFT_2492 0.23 +0.6
674,083 - B158DRAFT_2492 0.23 +0.0
674,084 - B158DRAFT_2492 0.23 +0.2
674,099 + B158DRAFT_2492 0.24 +0.3
674,099 + B158DRAFT_2492 0.24 -0.2
674,107 - B158DRAFT_2492 0.24 -0.5
674,107 - B158DRAFT_2492 0.24 -0.9
674,107 - B158DRAFT_2492 0.24 -1.4
674,123 - B158DRAFT_2492 0.25 -0.3
674,125 + B158DRAFT_2492 0.25 -1.2
674,125 + B158DRAFT_2492 0.25 -1.4
674,125 + B158DRAFT_2492 0.25 -0.0
674,129 + B158DRAFT_2492 0.26 -0.1
674,129 + B158DRAFT_2492 0.26 +0.1
674,133 - B158DRAFT_2492 0.26 -0.3
674,133 - B158DRAFT_2492 0.26 +0.4
674,133 - B158DRAFT_2492 0.26 -1.2
674,133 - B158DRAFT_2492 0.26 -1.1
674,137 - B158DRAFT_2492 0.26 -0.5
674,137 - B158DRAFT_2492 0.26 -2.3
674,137 - B158DRAFT_2492 0.26 +0.7
674,174 + B158DRAFT_2492 0.28 -0.7
674,354 - B158DRAFT_2492 0.37 -1.1
674,377 + B158DRAFT_2492 0.38 +0.1
674,377 + B158DRAFT_2492 0.38 +0.1
674,377 + B158DRAFT_2492 0.38 +0.1
674,385 - B158DRAFT_2492 0.39 +0.7
674,385 - B158DRAFT_2492 0.39 -1.3
674,385 - B158DRAFT_2492 0.39 +1.6
674,385 - B158DRAFT_2492 0.39 -1.4
674,385 - B158DRAFT_2492 0.39 -1.8
674,421 + B158DRAFT_2492 0.40 +0.5
674,428 + B158DRAFT_2492 0.41 -1.5
674,428 + B158DRAFT_2492 0.41 +0.7
674,429 - B158DRAFT_2492 0.41 +0.3
674,436 - B158DRAFT_2492 0.41 +0.8
674,500 + B158DRAFT_2492 0.44 +0.3
674,510 + B158DRAFT_2492 0.45 +0.1
674,510 + B158DRAFT_2492 0.45 +0.1
674,510 + B158DRAFT_2492 0.45 -0.7
674,510 + B158DRAFT_2492 0.45 +3.3
674,510 + B158DRAFT_2492 0.45 +0.1
674,510 + B158DRAFT_2492 0.45 -0.3
674,510 + B158DRAFT_2492 0.45 -1.0
674,510 + B158DRAFT_2492 0.45 -0.2
674,510 + B158DRAFT_2492 0.45 -0.1
674,518 - B158DRAFT_2492 0.45 -0.3
674,518 - B158DRAFT_2492 0.45 +1.0
674,518 - B158DRAFT_2492 0.45 -0.5
674,518 - B158DRAFT_2492 0.45 -0.5
674,602 + B158DRAFT_2492 0.50 -0.5
674,605 + B158DRAFT_2492 0.50 +0.3
674,605 + B158DRAFT_2492 0.50 -0.1

Or see this region's nucleotide sequence