Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2027

Experiment: m.b. Tetracycline 0.4 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2026 and B158DRAFT_2027 are separated by 498 nucleotidesB158DRAFT_2027 and B158DRAFT_2028 are separated by 54 nucleotidesB158DRAFT_2028 and B158DRAFT_2029 are separated by 57 nucleotides B158DRAFT_2026: B158DRAFT_2026 - Uncharacterized protein conserved in bacteria, at 155,530 to 156,549 _2026 B158DRAFT_2027: B158DRAFT_2027 - RNA polymerase sigma factor, sigma-70 family, at 157,048 to 157,572 _2027 B158DRAFT_2028: B158DRAFT_2028 - hypothetical protein, at 157,627 to 158,199 _2028 B158DRAFT_2029: B158DRAFT_2029 - Inorganic pyrophosphatase, at 158,257 to 158,787 _2029 Position (kb) 157 158Strain fitness (log2 ratio) -2 -1 0 1 2at 156.115 kb on - strand, within B158DRAFT_2026at 156.151 kb on - strand, within B158DRAFT_2026at 156.169 kb on - strand, within B158DRAFT_2026at 156.187 kb on + strand, within B158DRAFT_2026at 156.192 kb on + strand, within B158DRAFT_2026at 156.195 kb on - strand, within B158DRAFT_2026at 156.203 kb on + strand, within B158DRAFT_2026at 156.211 kb on - strand, within B158DRAFT_2026at 156.213 kb on + strand, within B158DRAFT_2026at 156.213 kb on + strand, within B158DRAFT_2026at 156.213 kb on - strand, within B158DRAFT_2026at 156.225 kb on - strand, within B158DRAFT_2026at 156.240 kb on + strand, within B158DRAFT_2026at 156.251 kb on + strand, within B158DRAFT_2026at 156.252 kb on - strand, within B158DRAFT_2026at 156.296 kb on + strand, within B158DRAFT_2026at 156.408 kb on + strand, within B158DRAFT_2026at 156.477 kb on + strandat 156.483 kb on - strandat 156.485 kb on - strandat 156.542 kb on - strandat 156.663 kb on - strandat 156.696 kb on + strandat 156.704 kb on + strandat 156.704 kb on + strandat 156.704 kb on + strandat 156.704 kb on + strandat 156.704 kb on + strandat 156.704 kb on + strandat 156.704 kb on + strandat 156.712 kb on - strandat 156.712 kb on - strandat 156.712 kb on - strandat 156.712 kb on - strandat 156.712 kb on - strandat 156.734 kb on + strandat 156.748 kb on + strandat 156.756 kb on + strandat 156.756 kb on + strandat 156.764 kb on - strandat 156.804 kb on + strandat 156.816 kb on + strandat 156.826 kb on + strandat 156.826 kb on + strandat 156.931 kb on + strandat 156.939 kb on - strandat 157.005 kb on - strandat 157.007 kb on - strandat 157.022 kb on - strandat 157.038 kb on - strandat 157.043 kb on - strandat 157.215 kb on + strand, within B158DRAFT_2027at 157.295 kb on + strand, within B158DRAFT_2027at 157.295 kb on + strand, within B158DRAFT_2027at 157.368 kb on + strand, within B158DRAFT_2027at 157.431 kb on + strand, within B158DRAFT_2027at 157.439 kb on - strand, within B158DRAFT_2027at 157.439 kb on - strand, within B158DRAFT_2027at 157.460 kb on - strand, within B158DRAFT_2027at 157.503 kb on + strand, within B158DRAFT_2027at 157.515 kb on + strand, within B158DRAFT_2027at 157.515 kb on + strand, within B158DRAFT_2027at 157.520 kb on + strandat 157.523 kb on - strandat 157.525 kb on + strandat 157.525 kb on + strandat 157.525 kb on + strandat 157.533 kb on - strandat 157.543 kb on - strandat 157.550 kb on + strandat 157.705 kb on - strand, within B158DRAFT_2028at 157.840 kb on + strand, within B158DRAFT_2028at 157.840 kb on + strand, within B158DRAFT_2028at 157.840 kb on + strand, within B158DRAFT_2028at 157.848 kb on - strand, within B158DRAFT_2028at 157.853 kb on + strand, within B158DRAFT_2028at 157.910 kb on - strand, within B158DRAFT_2028at 157.951 kb on + strand, within B158DRAFT_2028at 157.995 kb on + strand, within B158DRAFT_2028at 157.995 kb on + strand, within B158DRAFT_2028at 158.003 kb on - strand, within B158DRAFT_2028at 158.003 kb on - strand, within B158DRAFT_2028at 158.028 kb on + strand, within B158DRAFT_2028at 158.036 kb on - strand, within B158DRAFT_2028at 158.036 kb on - strand, within B158DRAFT_2028at 158.036 kb on - strand, within B158DRAFT_2028at 158.042 kb on - strand, within B158DRAFT_2028at 158.047 kb on - strand, within B158DRAFT_2028at 158.047 kb on - strand, within B158DRAFT_2028at 158.047 kb on - strand, within B158DRAFT_2028at 158.076 kb on + strand, within B158DRAFT_2028at 158.094 kb on + strand, within B158DRAFT_2028at 158.113 kb on - strand, within B158DRAFT_2028at 158.149 kb on + strandat 158.282 kb on - strandat 158.282 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.4 mg/ml
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156,115 - B158DRAFT_2026 0.57 +0.1
156,151 - B158DRAFT_2026 0.61 -0.3
156,169 - B158DRAFT_2026 0.63 +1.1
156,187 + B158DRAFT_2026 0.64 +0.3
156,192 + B158DRAFT_2026 0.65 -0.6
156,195 - B158DRAFT_2026 0.65 -0.2
156,203 + B158DRAFT_2026 0.66 -0.4
156,211 - B158DRAFT_2026 0.67 +0.5
156,213 + B158DRAFT_2026 0.67 +0.2
156,213 + B158DRAFT_2026 0.67 -0.3
156,213 - B158DRAFT_2026 0.67 -0.0
156,225 - B158DRAFT_2026 0.68 -1.5
156,240 + B158DRAFT_2026 0.70 +1.1
156,251 + B158DRAFT_2026 0.71 +2.1
156,252 - B158DRAFT_2026 0.71 -1.5
156,296 + B158DRAFT_2026 0.75 -0.4
156,408 + B158DRAFT_2026 0.86 +0.3
156,477 + -0.7
156,483 - -1.2
156,485 - -0.9
156,542 - +0.7
156,663 - -0.2
156,696 + -1.5
156,704 + -0.0
156,704 + +0.7
156,704 + -0.5
156,704 + -0.0
156,704 + +0.5
156,704 + -0.0
156,704 + -1.7
156,712 - -0.9
156,712 - -0.3
156,712 - -0.5
156,712 - -1.2
156,712 - -0.3
156,734 + -0.9
156,748 + -0.9
156,756 + -1.3
156,756 + -0.8
156,764 - -0.3
156,804 + -0.0
156,816 + -1.1
156,826 + -0.8
156,826 + -0.4
156,931 + -0.5
156,939 - +0.9
157,005 - -0.6
157,007 - -0.4
157,022 - +0.7
157,038 - -0.9
157,043 - -1.8
157,215 + B158DRAFT_2027 0.32 -0.3
157,295 + B158DRAFT_2027 0.47 +1.5
157,295 + B158DRAFT_2027 0.47 -1.0
157,368 + B158DRAFT_2027 0.61 -0.2
157,431 + B158DRAFT_2027 0.73 -0.2
157,439 - B158DRAFT_2027 0.74 +0.7
157,439 - B158DRAFT_2027 0.74 +0.3
157,460 - B158DRAFT_2027 0.78 +0.5
157,503 + B158DRAFT_2027 0.87 +2.3
157,515 + B158DRAFT_2027 0.89 +0.1
157,515 + B158DRAFT_2027 0.89 -0.0
157,520 + -0.9
157,523 - -0.9
157,525 + -0.1
157,525 + -0.9
157,525 + -0.3
157,533 - -0.2
157,543 - +0.7
157,550 + -0.9
157,705 - B158DRAFT_2028 0.14 +1.3
157,840 + B158DRAFT_2028 0.37 -1.1
157,840 + B158DRAFT_2028 0.37 +0.5
157,840 + B158DRAFT_2028 0.37 -0.3
157,848 - B158DRAFT_2028 0.39 +2.6
157,853 + B158DRAFT_2028 0.39 -0.5
157,910 - B158DRAFT_2028 0.49 -0.9
157,951 + B158DRAFT_2028 0.57 +2.1
157,995 + B158DRAFT_2028 0.64 +1.2
157,995 + B158DRAFT_2028 0.64 +0.6
158,003 - B158DRAFT_2028 0.66 +0.5
158,003 - B158DRAFT_2028 0.66 +1.4
158,028 + B158DRAFT_2028 0.70 +0.3
158,036 - B158DRAFT_2028 0.71 +1.6
158,036 - B158DRAFT_2028 0.71 +0.3
158,036 - B158DRAFT_2028 0.71 -0.4
158,042 - B158DRAFT_2028 0.72 +1.6
158,047 - B158DRAFT_2028 0.73 -2.6
158,047 - B158DRAFT_2028 0.73 +0.3
158,047 - B158DRAFT_2028 0.73 -0.1
158,076 + B158DRAFT_2028 0.78 +0.7
158,094 + B158DRAFT_2028 0.82 +1.1
158,113 - B158DRAFT_2028 0.85 +0.9
158,149 + +1.4
158,282 - -0.2
158,282 - -0.1

Or see this region's nucleotide sequence