Experiment: m.b. Tetracycline 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2024 and B158DRAFT_2025 are separated by 76 nucleotides B158DRAFT_2025 and B158DRAFT_2026 are separated by 41 nucleotides B158DRAFT_2026 and B158DRAFT_2027 are separated by 498 nucleotides
B158DRAFT_2024: B158DRAFT_2024 - 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway), at 154,243 to 154,977
_2024
B158DRAFT_2025: B158DRAFT_2025 - Uncharacterized protein conserved in bacteria, at 155,054 to 155,488
_2025
B158DRAFT_2026: B158DRAFT_2026 - Uncharacterized protein conserved in bacteria, at 155,530 to 156,549
_2026
B158DRAFT_2027: B158DRAFT_2027 - RNA polymerase sigma factor, sigma-70 family, at 157,048 to 157,572
_2027
Position (kb) 155
156
157 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 154.545 kb on + strand, within B158DRAFT_2024 at 154.597 kb on - strand, within B158DRAFT_2024 at 154.599 kb on + strand, within B158DRAFT_2024 at 154.599 kb on + strand, within B158DRAFT_2024 at 154.599 kb on + strand, within B158DRAFT_2024 at 154.599 kb on + strand, within B158DRAFT_2024 at 154.599 kb on + strand, within B158DRAFT_2024 at 154.599 kb on + strand, within B158DRAFT_2024 at 154.605 kb on + strand, within B158DRAFT_2024 at 154.607 kb on - strand, within B158DRAFT_2024 at 154.607 kb on - strand, within B158DRAFT_2024 at 154.607 kb on - strand, within B158DRAFT_2024 at 154.640 kb on - strand, within B158DRAFT_2024 at 154.649 kb on - strand, within B158DRAFT_2024 at 154.733 kb on - strand, within B158DRAFT_2024 at 154.748 kb on + strand, within B158DRAFT_2024 at 154.784 kb on + strand, within B158DRAFT_2024 at 154.794 kb on + strand, within B158DRAFT_2024 at 154.802 kb on - strand, within B158DRAFT_2024 at 154.802 kb on - strand, within B158DRAFT_2024 at 154.802 kb on - strand, within B158DRAFT_2024 at 154.803 kb on - strand, within B158DRAFT_2024 at 154.813 kb on + strand, within B158DRAFT_2024 at 154.813 kb on + strand, within B158DRAFT_2024 at 154.821 kb on - strand, within B158DRAFT_2024 at 154.828 kb on + strand, within B158DRAFT_2024 at 154.831 kb on - strand, within B158DRAFT_2024 at 154.841 kb on + strand, within B158DRAFT_2024 at 154.932 kb on + strand at 155.000 kb on - strand at 155.010 kb on + strand at 155.187 kb on - strand, within B158DRAFT_2025 at 155.256 kb on + strand, within B158DRAFT_2025 at 155.256 kb on + strand, within B158DRAFT_2025 at 155.256 kb on + strand, within B158DRAFT_2025 at 155.280 kb on + strand, within B158DRAFT_2025 at 155.310 kb on - strand, within B158DRAFT_2025 at 155.385 kb on + strand, within B158DRAFT_2025 at 155.385 kb on + strand, within B158DRAFT_2025 at 155.385 kb on + strand, within B158DRAFT_2025 at 155.393 kb on - strand, within B158DRAFT_2025 at 155.393 kb on - strand, within B158DRAFT_2025 at 155.397 kb on + strand, within B158DRAFT_2025 at 155.408 kb on + strand, within B158DRAFT_2025 at 155.415 kb on - strand, within B158DRAFT_2025 at 155.463 kb on + strand at 155.492 kb on - strand at 155.502 kb on - strand at 155.517 kb on - strand at 155.517 kb on - strand at 155.532 kb on + strand at 155.573 kb on + strand at 155.581 kb on - strand at 155.677 kb on + strand, within B158DRAFT_2026 at 155.687 kb on + strand, within B158DRAFT_2026 at 155.687 kb on + strand, within B158DRAFT_2026 at 155.687 kb on + strand, within B158DRAFT_2026 at 155.695 kb on - strand, within B158DRAFT_2026 at 155.695 kb on - strand, within B158DRAFT_2026 at 155.893 kb on + strand, within B158DRAFT_2026 at 155.894 kb on - strand, within B158DRAFT_2026 at 155.918 kb on - strand, within B158DRAFT_2026 at 156.013 kb on + strand, within B158DRAFT_2026 at 156.031 kb on - strand, within B158DRAFT_2026 at 156.115 kb on - strand, within B158DRAFT_2026 at 156.151 kb on - strand, within B158DRAFT_2026 at 156.169 kb on - strand, within B158DRAFT_2026 at 156.187 kb on + strand, within B158DRAFT_2026 at 156.192 kb on + strand, within B158DRAFT_2026 at 156.195 kb on - strand, within B158DRAFT_2026 at 156.203 kb on + strand, within B158DRAFT_2026 at 156.211 kb on - strand, within B158DRAFT_2026 at 156.213 kb on + strand, within B158DRAFT_2026 at 156.213 kb on + strand, within B158DRAFT_2026 at 156.213 kb on - strand, within B158DRAFT_2026 at 156.225 kb on - strand, within B158DRAFT_2026 at 156.240 kb on + strand, within B158DRAFT_2026 at 156.251 kb on + strand, within B158DRAFT_2026 at 156.252 kb on - strand, within B158DRAFT_2026 at 156.296 kb on + strand, within B158DRAFT_2026 at 156.408 kb on + strand, within B158DRAFT_2026 at 156.477 kb on + strand at 156.483 kb on - strand at 156.485 kb on - strand at 156.542 kb on - strand at 156.663 kb on - strand at 156.696 kb on + strand at 156.704 kb on + strand at 156.704 kb on + strand at 156.704 kb on + strand at 156.704 kb on + strand at 156.704 kb on + strand at 156.704 kb on + strand at 156.704 kb on + strand at 156.712 kb on - strand at 156.712 kb on - strand at 156.712 kb on - strand at 156.712 kb on - strand at 156.712 kb on - strand at 156.734 kb on + strand at 156.748 kb on + strand at 156.756 kb on + strand at 156.756 kb on + strand at 156.764 kb on - strand at 156.804 kb on + strand at 156.816 kb on + strand at 156.826 kb on + strand at 156.826 kb on + strand at 156.931 kb on + strand at 156.939 kb on - strand at 157.005 kb on - strand at 157.007 kb on - strand at 157.022 kb on - strand at 157.038 kb on - strand at 157.043 kb on - strand at 157.215 kb on + strand, within B158DRAFT_2027 at 157.295 kb on + strand, within B158DRAFT_2027 at 157.295 kb on + strand, within B158DRAFT_2027 at 157.368 kb on + strand, within B158DRAFT_2027 at 157.431 kb on + strand, within B158DRAFT_2027 at 157.439 kb on - strand, within B158DRAFT_2027 at 157.439 kb on - strand, within B158DRAFT_2027 at 157.460 kb on - strand, within B158DRAFT_2027 at 157.503 kb on + strand, within B158DRAFT_2027 at 157.515 kb on + strand, within B158DRAFT_2027 at 157.515 kb on + strand, within B158DRAFT_2027 at 157.520 kb on + strand at 157.523 kb on - strand at 157.525 kb on + strand at 157.525 kb on + strand at 157.525 kb on + strand at 157.533 kb on - strand at 157.543 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.4 mg/ml remove 154,545 + B158DRAFT_2024 0.41 -0.5 154,597 - B158DRAFT_2024 0.48 -0.2 154,599 + B158DRAFT_2024 0.48 -0.3 154,599 + B158DRAFT_2024 0.48 +0.1 154,599 + B158DRAFT_2024 0.48 -0.5 154,599 + B158DRAFT_2024 0.48 +0.2 154,599 + B158DRAFT_2024 0.48 -1.6 154,599 + B158DRAFT_2024 0.48 -0.0 154,605 + B158DRAFT_2024 0.49 +1.1 154,607 - B158DRAFT_2024 0.50 -0.0 154,607 - B158DRAFT_2024 0.50 -0.0 154,607 - B158DRAFT_2024 0.50 +0.3 154,640 - B158DRAFT_2024 0.54 -0.4 154,649 - B158DRAFT_2024 0.55 -0.4 154,733 - B158DRAFT_2024 0.67 -0.8 154,748 + B158DRAFT_2024 0.69 +2.9 154,784 + B158DRAFT_2024 0.74 +0.2 154,794 + B158DRAFT_2024 0.75 -0.9 154,802 - B158DRAFT_2024 0.76 +0.2 154,802 - B158DRAFT_2024 0.76 +0.3 154,802 - B158DRAFT_2024 0.76 -0.4 154,803 - B158DRAFT_2024 0.76 -0.6 154,813 + B158DRAFT_2024 0.78 -0.9 154,813 + B158DRAFT_2024 0.78 +1.1 154,821 - B158DRAFT_2024 0.79 -0.3 154,828 + B158DRAFT_2024 0.80 -1.0 154,831 - B158DRAFT_2024 0.80 +0.0 154,841 + B158DRAFT_2024 0.81 -0.8 154,932 + +0.3 155,000 - -0.8 155,010 + +0.6 155,187 - B158DRAFT_2025 0.31 -0.6 155,256 + B158DRAFT_2025 0.46 -0.5 155,256 + B158DRAFT_2025 0.46 -0.9 155,256 + B158DRAFT_2025 0.46 -0.2 155,280 + B158DRAFT_2025 0.52 +0.1 155,310 - B158DRAFT_2025 0.59 +0.2 155,385 + B158DRAFT_2025 0.76 -0.5 155,385 + B158DRAFT_2025 0.76 -0.4 155,385 + B158DRAFT_2025 0.76 -1.0 155,393 - B158DRAFT_2025 0.78 -0.5 155,393 - B158DRAFT_2025 0.78 +0.1 155,397 + B158DRAFT_2025 0.79 -0.6 155,408 + B158DRAFT_2025 0.81 -0.2 155,415 - B158DRAFT_2025 0.83 -0.1 155,463 + -0.3 155,492 - +0.2 155,502 - -0.9 155,517 - -0.5 155,517 - -0.4 155,532 + -0.6 155,573 + -0.3 155,581 - -0.4 155,677 + B158DRAFT_2026 0.14 -1.0 155,687 + B158DRAFT_2026 0.15 -1.9 155,687 + B158DRAFT_2026 0.15 +0.1 155,687 + B158DRAFT_2026 0.15 -1.6 155,695 - B158DRAFT_2026 0.16 +0.0 155,695 - B158DRAFT_2026 0.16 -0.4 155,893 + B158DRAFT_2026 0.36 -0.4 155,894 - B158DRAFT_2026 0.36 +0.7 155,918 - B158DRAFT_2026 0.38 -0.0 156,013 + B158DRAFT_2026 0.47 +0.1 156,031 - B158DRAFT_2026 0.49 -0.6 156,115 - B158DRAFT_2026 0.57 +0.1 156,151 - B158DRAFT_2026 0.61 -0.3 156,169 - B158DRAFT_2026 0.63 +1.1 156,187 + B158DRAFT_2026 0.64 +0.3 156,192 + B158DRAFT_2026 0.65 -0.6 156,195 - B158DRAFT_2026 0.65 -0.2 156,203 + B158DRAFT_2026 0.66 -0.4 156,211 - B158DRAFT_2026 0.67 +0.5 156,213 + B158DRAFT_2026 0.67 +0.2 156,213 + B158DRAFT_2026 0.67 -0.3 156,213 - B158DRAFT_2026 0.67 -0.0 156,225 - B158DRAFT_2026 0.68 -1.5 156,240 + B158DRAFT_2026 0.70 +1.1 156,251 + B158DRAFT_2026 0.71 +2.1 156,252 - B158DRAFT_2026 0.71 -1.5 156,296 + B158DRAFT_2026 0.75 -0.4 156,408 + B158DRAFT_2026 0.86 +0.3 156,477 + -0.7 156,483 - -1.2 156,485 - -0.9 156,542 - +0.7 156,663 - -0.2 156,696 + -1.5 156,704 + -0.0 156,704 + +0.7 156,704 + -0.5 156,704 + -0.0 156,704 + +0.5 156,704 + -0.0 156,704 + -1.7 156,712 - -0.9 156,712 - -0.3 156,712 - -0.5 156,712 - -1.2 156,712 - -0.3 156,734 + -0.9 156,748 + -0.9 156,756 + -1.3 156,756 + -0.8 156,764 - -0.3 156,804 + -0.0 156,816 + -1.1 156,826 + -0.8 156,826 + -0.4 156,931 + -0.5 156,939 - +0.9 157,005 - -0.6 157,007 - -0.4 157,022 - +0.7 157,038 - -0.9 157,043 - -1.8 157,215 + B158DRAFT_2027 0.32 -0.3 157,295 + B158DRAFT_2027 0.47 +1.5 157,295 + B158DRAFT_2027 0.47 -1.0 157,368 + B158DRAFT_2027 0.61 -0.2 157,431 + B158DRAFT_2027 0.73 -0.2 157,439 - B158DRAFT_2027 0.74 +0.7 157,439 - B158DRAFT_2027 0.74 +0.3 157,460 - B158DRAFT_2027 0.78 +0.5 157,503 + B158DRAFT_2027 0.87 +2.3 157,515 + B158DRAFT_2027 0.89 +0.1 157,515 + B158DRAFT_2027 0.89 -0.0 157,520 + -0.9 157,523 - -0.9 157,525 + -0.1 157,525 + -0.9 157,525 + -0.3 157,533 - -0.2 157,543 - +0.7
Or see this region's nucleotide sequence