Experiment: m.b. Tetracycline 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1735 and B158DRAFT_1736 are separated by 120 nucleotides B158DRAFT_1736 and B158DRAFT_1737 are separated by 0 nucleotides B158DRAFT_1737 and B158DRAFT_1738 overlap by 4 nucleotides B158DRAFT_1738 and B158DRAFT_1739 overlap by 8 nucleotides
B158DRAFT_1735: B158DRAFT_1735 - Subtilisin-like serine proteases, at 1,811,742 to 1,814,204
_1735
B158DRAFT_1736: B158DRAFT_1736 - hypothetical protein, at 1,814,325 to 1,814,726
_1736
B158DRAFT_1737: B158DRAFT_1737 - two component transcriptional regulator, LuxR family, at 1,814,727 to 1,815,365
_1737
B158DRAFT_1738: B158DRAFT_1738 - Histidine kinase/Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, at 1,815,362 to 1,816,105
_1738
B158DRAFT_1739: B158DRAFT_1739 - Protein kinase domain., at 1,816,098 to 1,819,463
_1739
Position (kb)
1814
1815
1816 Strain fitness (log2 ratio)
-1
0
1 at 1813.739 kb on + strand, within B158DRAFT_1735 at 1813.777 kb on + strand, within B158DRAFT_1735 at 1813.831 kb on + strand, within B158DRAFT_1735 at 1813.833 kb on + strand, within B158DRAFT_1735 at 1813.841 kb on - strand, within B158DRAFT_1735 at 1813.846 kb on - strand, within B158DRAFT_1735 at 1813.878 kb on + strand, within B158DRAFT_1735 at 1813.878 kb on + strand, within B158DRAFT_1735 at 1813.878 kb on + strand, within B158DRAFT_1735 at 1813.886 kb on - strand, within B158DRAFT_1735 at 1813.886 kb on - strand, within B158DRAFT_1735 at 1813.886 kb on - strand, within B158DRAFT_1735 at 1813.886 kb on - strand, within B158DRAFT_1735 at 1813.886 kb on - strand, within B158DRAFT_1735 at 1813.962 kb on + strand at 1813.967 kb on + strand at 1813.985 kb on + strand at 1813.993 kb on - strand at 1814.001 kb on + strand at 1814.001 kb on + strand at 1814.036 kb on + strand at 1814.099 kb on + strand at 1814.107 kb on - strand at 1814.107 kb on - strand at 1814.142 kb on + strand at 1814.145 kb on - strand at 1814.229 kb on + strand at 1814.425 kb on + strand, within B158DRAFT_1736 at 1814.433 kb on + strand, within B158DRAFT_1736 at 1814.497 kb on + strand, within B158DRAFT_1736 at 1814.568 kb on + strand, within B158DRAFT_1736 at 1814.576 kb on - strand, within B158DRAFT_1736 at 1814.658 kb on + strand, within B158DRAFT_1736 at 1814.773 kb on + strand at 1814.909 kb on + strand, within B158DRAFT_1737 at 1814.995 kb on - strand, within B158DRAFT_1737 at 1814.999 kb on - strand, within B158DRAFT_1737 at 1815.181 kb on + strand, within B158DRAFT_1737 at 1815.204 kb on + strand, within B158DRAFT_1737 at 1815.252 kb on + strand, within B158DRAFT_1737 at 1815.283 kb on - strand, within B158DRAFT_1737 at 1815.312 kb on + strand at 1815.312 kb on + strand at 1815.350 kb on + strand at 1815.384 kb on + strand at 1815.384 kb on + strand at 1815.385 kb on - strand at 1815.392 kb on - strand at 1815.419 kb on + strand at 1815.419 kb on + strand at 1815.427 kb on - strand at 1815.427 kb on - strand at 1815.427 kb on - strand at 1815.427 kb on - strand at 1815.427 kb on - strand at 1815.430 kb on + strand at 1815.430 kb on + strand at 1815.437 kb on - strand, within B158DRAFT_1738 at 1815.455 kb on + strand, within B158DRAFT_1738 at 1815.490 kb on + strand, within B158DRAFT_1738 at 1815.498 kb on - strand, within B158DRAFT_1738 at 1815.498 kb on - strand, within B158DRAFT_1738 at 1815.498 kb on - strand, within B158DRAFT_1738 at 1815.498 kb on - strand, within B158DRAFT_1738 at 1815.498 kb on - strand, within B158DRAFT_1738 at 1815.516 kb on - strand, within B158DRAFT_1738 at 1815.523 kb on + strand, within B158DRAFT_1738 at 1815.524 kb on + strand, within B158DRAFT_1738 at 1815.537 kb on + strand, within B158DRAFT_1738 at 1815.537 kb on + strand, within B158DRAFT_1738 at 1815.545 kb on - strand, within B158DRAFT_1738 at 1815.545 kb on - strand, within B158DRAFT_1738 at 1815.581 kb on - strand, within B158DRAFT_1738 at 1815.648 kb on + strand, within B158DRAFT_1738 at 1815.703 kb on + strand, within B158DRAFT_1738 at 1815.839 kb on - strand, within B158DRAFT_1738 at 1815.851 kb on - strand, within B158DRAFT_1738 at 1815.851 kb on - strand, within B158DRAFT_1738 at 1815.867 kb on + strand, within B158DRAFT_1738 at 1815.875 kb on - strand, within B158DRAFT_1738 at 1815.926 kb on - strand, within B158DRAFT_1738 at 1815.926 kb on - strand, within B158DRAFT_1738 at 1815.936 kb on + strand, within B158DRAFT_1738 at 1815.946 kb on - strand, within B158DRAFT_1738 at 1815.992 kb on - strand, within B158DRAFT_1738 at 1816.111 kb on + strand at 1816.353 kb on + strand at 1816.360 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.4 mg/ml remove 1,813,739 + B158DRAFT_1735 0.81 -0.5 1,813,777 + B158DRAFT_1735 0.83 -0.6 1,813,831 + B158DRAFT_1735 0.85 -0.1 1,813,833 + B158DRAFT_1735 0.85 -0.9 1,813,841 - B158DRAFT_1735 0.85 +0.7 1,813,846 - B158DRAFT_1735 0.85 +0.6 1,813,878 + B158DRAFT_1735 0.87 +0.7 1,813,878 + B158DRAFT_1735 0.87 -1.2 1,813,878 + B158DRAFT_1735 0.87 -0.2 1,813,886 - B158DRAFT_1735 0.87 -0.4 1,813,886 - B158DRAFT_1735 0.87 +0.1 1,813,886 - B158DRAFT_1735 0.87 +0.3 1,813,886 - B158DRAFT_1735 0.87 -0.2 1,813,886 - B158DRAFT_1735 0.87 -1.2 1,813,962 + -0.3 1,813,967 + -0.1 1,813,985 + +0.2 1,813,993 - +0.2 1,814,001 + -0.4 1,814,001 + +0.3 1,814,036 + -0.5 1,814,099 + -0.3 1,814,107 - -0.9 1,814,107 - -0.5 1,814,142 + -0.4 1,814,145 - -0.1 1,814,229 + -0.2 1,814,425 + B158DRAFT_1736 0.25 -0.5 1,814,433 + B158DRAFT_1736 0.27 -1.3 1,814,497 + B158DRAFT_1736 0.43 -0.2 1,814,568 + B158DRAFT_1736 0.60 -0.9 1,814,576 - B158DRAFT_1736 0.62 -0.5 1,814,658 + B158DRAFT_1736 0.83 +0.6 1,814,773 + -0.7 1,814,909 + B158DRAFT_1737 0.28 -0.3 1,814,995 - B158DRAFT_1737 0.42 +0.0 1,814,999 - B158DRAFT_1737 0.43 -1.1 1,815,181 + B158DRAFT_1737 0.71 -0.1 1,815,204 + B158DRAFT_1737 0.75 +0.5 1,815,252 + B158DRAFT_1737 0.82 +0.1 1,815,283 - B158DRAFT_1737 0.87 +0.2 1,815,312 + -1.0 1,815,312 + -0.3 1,815,350 + -0.3 1,815,384 + +0.4 1,815,384 + -0.5 1,815,385 - +0.4 1,815,392 - -0.2 1,815,419 + -0.7 1,815,419 + -0.2 1,815,427 - -0.8 1,815,427 - +0.0 1,815,427 - -0.3 1,815,427 - -0.8 1,815,427 - +0.1 1,815,430 + +0.9 1,815,430 + -0.6 1,815,437 - B158DRAFT_1738 0.10 -0.4 1,815,455 + B158DRAFT_1738 0.12 +0.1 1,815,490 + B158DRAFT_1738 0.17 -0.9 1,815,498 - B158DRAFT_1738 0.18 -0.2 1,815,498 - B158DRAFT_1738 0.18 -0.1 1,815,498 - B158DRAFT_1738 0.18 -0.8 1,815,498 - B158DRAFT_1738 0.18 -0.5 1,815,498 - B158DRAFT_1738 0.18 +1.0 1,815,516 - B158DRAFT_1738 0.21 +0.2 1,815,523 + B158DRAFT_1738 0.22 -0.1 1,815,524 + B158DRAFT_1738 0.22 -0.2 1,815,537 + B158DRAFT_1738 0.24 +0.5 1,815,537 + B158DRAFT_1738 0.24 -0.1 1,815,545 - B158DRAFT_1738 0.25 -1.7 1,815,545 - B158DRAFT_1738 0.25 +0.6 1,815,581 - B158DRAFT_1738 0.29 -0.7 1,815,648 + B158DRAFT_1738 0.38 +0.5 1,815,703 + B158DRAFT_1738 0.46 -0.2 1,815,839 - B158DRAFT_1738 0.64 +0.4 1,815,851 - B158DRAFT_1738 0.66 -0.1 1,815,851 - B158DRAFT_1738 0.66 +0.2 1,815,867 + B158DRAFT_1738 0.68 -0.2 1,815,875 - B158DRAFT_1738 0.69 +0.2 1,815,926 - B158DRAFT_1738 0.76 -0.5 1,815,926 - B158DRAFT_1738 0.76 -0.0 1,815,936 + B158DRAFT_1738 0.77 +0.4 1,815,946 - B158DRAFT_1738 0.78 +0.0 1,815,992 - B158DRAFT_1738 0.85 -0.0 1,816,111 + -0.9 1,816,353 + -0.7 1,816,360 - +1.3
Or see this region's nucleotide sequence