Experiment: m.b. Tetracycline 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1261 and B158DRAFT_1262 are separated by 31 nucleotides B158DRAFT_1262 and B158DRAFT_1263 overlap by 23 nucleotides B158DRAFT_1263 and B158DRAFT_1264 are separated by 96 nucleotides B158DRAFT_1264 and B158DRAFT_1265 are separated by 141 nucleotides
B158DRAFT_1261: B158DRAFT_1261 - phenylalanyl-tRNA synthetase beta subunit (EC 6.1.1.20), at 1,298,136 to 1,300,514
_1261
B158DRAFT_1262: B158DRAFT_1262 - integration host factor, alpha subunit, at 1,300,546 to 1,300,848
_1262
B158DRAFT_1263: B158DRAFT_1263 - Predicted transcriptional regulators, at 1,300,826 to 1,301,176
_1263
B158DRAFT_1264: B158DRAFT_1264 - tRNA_Pro_GGG, at 1,301,273 to 1,301,349
_1264
B158DRAFT_1265: B158DRAFT_1265 - tRNA_Ser_TGA, at 1,301,491 to 1,301,581
_1265
Position (kb)
1300
1301 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1300.588 kb on + strand, within B158DRAFT_1262 at 1300.622 kb on + strand, within B158DRAFT_1262 at 1300.644 kb on + strand, within B158DRAFT_1262 at 1300.644 kb on + strand, within B158DRAFT_1262 at 1300.725 kb on + strand, within B158DRAFT_1262 at 1300.732 kb on - strand, within B158DRAFT_1262 at 1300.784 kb on + strand, within B158DRAFT_1262 at 1300.785 kb on + strand, within B158DRAFT_1262 at 1300.793 kb on - strand, within B158DRAFT_1262 at 1300.826 kb on + strand at 1301.169 kb on - strand at 1301.179 kb on - strand at 1301.228 kb on + strand at 1301.230 kb on + strand at 1301.240 kb on - strand at 1301.287 kb on + strand, within B158DRAFT_1264 at 1301.287 kb on + strand, within B158DRAFT_1264 at 1301.293 kb on - strand, within B158DRAFT_1264 at 1301.300 kb on + strand, within B158DRAFT_1264 at 1301.308 kb on + strand, within B158DRAFT_1264 at 1301.310 kb on + strand, within B158DRAFT_1264 at 1301.316 kb on - strand, within B158DRAFT_1264 at 1301.318 kb on + strand, within B158DRAFT_1264 at 1301.326 kb on + strand, within B158DRAFT_1264 at 1301.326 kb on - strand, within B158DRAFT_1264 at 1301.326 kb on - strand, within B158DRAFT_1264 at 1301.326 kb on - strand, within B158DRAFT_1264 at 1301.335 kb on - strand, within B158DRAFT_1264 at 1301.396 kb on - strand at 1301.401 kb on - strand at 1301.648 kb on + strand at 1301.718 kb on - strand at 1301.741 kb on - strand at 1301.741 kb on - strand at 1301.818 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.4 mg/ml remove 1,300,588 + B158DRAFT_1262 0.14 +3.0 1,300,622 + B158DRAFT_1262 0.25 +2.3 1,300,644 + B158DRAFT_1262 0.32 +1.9 1,300,644 + B158DRAFT_1262 0.32 +0.1 1,300,725 + B158DRAFT_1262 0.59 +2.6 1,300,732 - B158DRAFT_1262 0.61 +2.5 1,300,784 + B158DRAFT_1262 0.79 +0.9 1,300,785 + B158DRAFT_1262 0.79 +0.3 1,300,793 - B158DRAFT_1262 0.82 +1.1 1,300,826 + -0.5 1,301,169 - +0.9 1,301,179 - -0.6 1,301,228 + +0.5 1,301,230 + +0.1 1,301,240 - +0.3 1,301,287 + B158DRAFT_1264 0.18 +0.1 1,301,287 + B158DRAFT_1264 0.18 -0.7 1,301,293 - B158DRAFT_1264 0.26 -0.4 1,301,300 + B158DRAFT_1264 0.35 +0.6 1,301,308 + B158DRAFT_1264 0.45 -0.7 1,301,310 + B158DRAFT_1264 0.48 -1.3 1,301,316 - B158DRAFT_1264 0.56 -0.5 1,301,318 + B158DRAFT_1264 0.58 -0.2 1,301,326 + B158DRAFT_1264 0.69 +0.9 1,301,326 - B158DRAFT_1264 0.69 +1.0 1,301,326 - B158DRAFT_1264 0.69 +1.2 1,301,326 - B158DRAFT_1264 0.69 +0.7 1,301,335 - B158DRAFT_1264 0.81 -1.6 1,301,396 - -0.1 1,301,401 - -0.4 1,301,648 + +0.4 1,301,718 - -0.3 1,301,741 - -0.7 1,301,741 - +0.3 1,301,818 - -0.7
Or see this region's nucleotide sequence