Experiment: m.b. Tetracycline 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0463 and B158DRAFT_0464 are separated by 199 nucleotides B158DRAFT_0464 and B158DRAFT_0465 are separated by 40 nucleotides B158DRAFT_0465 and B158DRAFT_0466 are separated by 95 nucleotides B158DRAFT_0466 and B158DRAFT_0467 overlap by 8 nucleotides
B158DRAFT_0463: B158DRAFT_0463 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 464,958 to 467,390
_0463
B158DRAFT_0464: B158DRAFT_0464 - Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily, at 467,590 to 468,126
_0464
B158DRAFT_0465: B158DRAFT_0465 - Putative salt-induced outer membrane protein, at 468,167 to 468,901
_0465
B158DRAFT_0466: B158DRAFT_0466 - RmlD substrate binding domain., at 468,997 to 469,791
_0466
B158DRAFT_0467: B158DRAFT_0467 - haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E, at 469,784 to 470,332
_0467
Position (kb) 468
469 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 467.191 kb on + strand at 467.191 kb on - strand at 467.211 kb on + strand at 467.219 kb on - strand at 467.219 kb on - strand at 467.240 kb on + strand at 467.240 kb on + strand at 467.240 kb on + strand at 467.240 kb on + strand at 467.255 kb on - strand at 467.255 kb on - strand at 467.255 kb on - strand at 467.266 kb on + strand at 467.266 kb on + strand at 467.266 kb on + strand at 467.266 kb on + strand at 467.266 kb on + strand at 467.266 kb on + strand at 467.266 kb on + strand at 467.274 kb on - strand at 467.274 kb on - strand at 467.274 kb on - strand at 467.274 kb on - strand at 467.274 kb on - strand at 467.274 kb on - strand at 467.274 kb on - strand at 467.274 kb on - strand at 467.274 kb on - strand at 467.274 kb on - strand at 467.298 kb on - strand at 467.316 kb on + strand at 467.316 kb on + strand at 467.316 kb on + strand at 467.324 kb on - strand at 467.324 kb on - strand at 467.385 kb on - strand at 467.408 kb on + strand at 467.417 kb on + strand at 467.449 kb on + strand at 467.538 kb on - strand at 467.542 kb on + strand at 467.550 kb on - strand at 467.550 kb on - strand at 467.552 kb on + strand at 467.552 kb on + strand at 467.552 kb on + strand at 467.552 kb on + strand at 467.552 kb on + strand at 467.578 kb on + strand at 467.578 kb on + strand at 467.578 kb on + strand at 467.578 kb on + strand at 468.093 kb on + strand at 468.229 kb on + strand at 468.317 kb on - strand, within B158DRAFT_0465 at 468.442 kb on + strand, within B158DRAFT_0465 at 468.455 kb on + strand, within B158DRAFT_0465 at 468.579 kb on - strand, within B158DRAFT_0465 at 468.620 kb on - strand, within B158DRAFT_0465 at 468.629 kb on + strand, within B158DRAFT_0465 at 468.629 kb on + strand, within B158DRAFT_0465 at 468.630 kb on + strand, within B158DRAFT_0465 at 468.638 kb on - strand, within B158DRAFT_0465 at 468.638 kb on - strand, within B158DRAFT_0465 at 468.743 kb on - strand, within B158DRAFT_0465 at 468.750 kb on + strand, within B158DRAFT_0465 at 468.750 kb on + strand, within B158DRAFT_0465 at 468.758 kb on - strand, within B158DRAFT_0465 at 468.765 kb on + strand, within B158DRAFT_0465 at 468.781 kb on - strand, within B158DRAFT_0465 at 468.781 kb on - strand, within B158DRAFT_0465 at 468.781 kb on - strand, within B158DRAFT_0465 at 468.797 kb on + strand, within B158DRAFT_0465 at 468.798 kb on + strand, within B158DRAFT_0465 at 468.805 kb on - strand, within B158DRAFT_0465 at 468.805 kb on - strand, within B158DRAFT_0465 at 468.805 kb on - strand, within B158DRAFT_0465 at 468.842 kb on + strand at 469.107 kb on - strand, within B158DRAFT_0466 at 469.141 kb on - strand, within B158DRAFT_0466 at 469.141 kb on - strand, within B158DRAFT_0466 at 469.194 kb on + strand, within B158DRAFT_0466 at 469.250 kb on + strand, within B158DRAFT_0466 at 469.264 kb on + strand, within B158DRAFT_0466 at 469.277 kb on - strand, within B158DRAFT_0466 at 469.277 kb on - strand, within B158DRAFT_0466 at 469.277 kb on - strand, within B158DRAFT_0466 at 469.303 kb on + strand, within B158DRAFT_0466 at 469.308 kb on + strand, within B158DRAFT_0466 at 469.310 kb on + strand, within B158DRAFT_0466 at 469.310 kb on + strand, within B158DRAFT_0466 at 469.316 kb on - strand, within B158DRAFT_0466 at 469.316 kb on - strand, within B158DRAFT_0466 at 469.336 kb on - strand, within B158DRAFT_0466 at 469.376 kb on + strand, within B158DRAFT_0466 at 469.376 kb on + strand, within B158DRAFT_0466 at 469.376 kb on + strand, within B158DRAFT_0466 at 469.376 kb on + strand, within B158DRAFT_0466 at 469.376 kb on + strand, within B158DRAFT_0466 at 469.376 kb on + strand, within B158DRAFT_0466 at 469.384 kb on - strand, within B158DRAFT_0466 at 469.415 kb on + strand, within B158DRAFT_0466 at 469.415 kb on + strand, within B158DRAFT_0466 at 469.423 kb on - strand, within B158DRAFT_0466 at 469.423 kb on - strand, within B158DRAFT_0466 at 469.423 kb on - strand, within B158DRAFT_0466 at 469.454 kb on + strand, within B158DRAFT_0466 at 469.462 kb on - strand, within B158DRAFT_0466 at 469.466 kb on - strand, within B158DRAFT_0466 at 469.540 kb on + strand, within B158DRAFT_0466 at 469.575 kb on + strand, within B158DRAFT_0466 at 469.575 kb on + strand, within B158DRAFT_0466 at 469.676 kb on + strand, within B158DRAFT_0466 at 469.676 kb on + strand, within B158DRAFT_0466 at 469.676 kb on + strand, within B158DRAFT_0466 at 469.676 kb on + strand, within B158DRAFT_0466 at 469.684 kb on - strand, within B158DRAFT_0466 at 469.684 kb on - strand, within B158DRAFT_0466 at 469.703 kb on - strand, within B158DRAFT_0466 at 469.703 kb on - strand, within B158DRAFT_0466 at 469.703 kb on - strand, within B158DRAFT_0466 at 469.703 kb on - strand, within B158DRAFT_0466 at 469.705 kb on + strand, within B158DRAFT_0466 at 469.757 kb on - strand at 469.794 kb on + strand at 469.825 kb on - strand at 469.875 kb on + strand, within B158DRAFT_0467 at 469.883 kb on - strand, within B158DRAFT_0467 at 469.883 kb on - strand, within B158DRAFT_0467 at 469.885 kb on + strand, within B158DRAFT_0467 at 469.888 kb on + strand, within B158DRAFT_0467
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.4 mg/ml remove 467,191 + +1.3 467,191 - -1.3 467,211 + +0.1 467,219 - +0.1 467,219 - -0.2 467,240 + -0.9 467,240 + -0.9 467,240 + -0.4 467,240 + -0.1 467,255 - -0.3 467,255 - -0.0 467,255 - +1.0 467,266 + +0.2 467,266 + +0.2 467,266 + +0.4 467,266 + -0.1 467,266 + -0.2 467,266 + +0.3 467,266 + -0.6 467,274 - -0.1 467,274 - -0.4 467,274 - -1.3 467,274 - -0.5 467,274 - -0.4 467,274 - +1.3 467,274 - -0.3 467,274 - -2.0 467,274 - +0.4 467,274 - +0.7 467,298 - +0.4 467,316 + -0.4 467,316 + -0.0 467,316 + -0.6 467,324 - +2.9 467,324 - -0.7 467,385 - +0.2 467,408 + -0.4 467,417 + -0.9 467,449 + -0.2 467,538 - -0.1 467,542 + +0.9 467,550 - -0.1 467,550 - -1.5 467,552 + -0.3 467,552 + +0.3 467,552 + -0.6 467,552 + -0.0 467,552 + +0.3 467,578 + -0.0 467,578 + -0.2 467,578 + -0.4 467,578 + -0.3 468,093 + -0.2 468,229 + +3.8 468,317 - B158DRAFT_0465 0.20 +4.3 468,442 + B158DRAFT_0465 0.37 +3.6 468,455 + B158DRAFT_0465 0.39 +2.8 468,579 - B158DRAFT_0465 0.56 +4.1 468,620 - B158DRAFT_0465 0.62 +4.1 468,629 + B158DRAFT_0465 0.63 +4.1 468,629 + B158DRAFT_0465 0.63 +3.6 468,630 + B158DRAFT_0465 0.63 +4.1 468,638 - B158DRAFT_0465 0.64 +2.5 468,638 - B158DRAFT_0465 0.64 +3.6 468,743 - B158DRAFT_0465 0.78 +4.3 468,750 + B158DRAFT_0465 0.79 +4.3 468,750 + B158DRAFT_0465 0.79 +3.7 468,758 - B158DRAFT_0465 0.80 +4.1 468,765 + B158DRAFT_0465 0.81 +3.8 468,781 - B158DRAFT_0465 0.84 +4.6 468,781 - B158DRAFT_0465 0.84 +3.8 468,781 - B158DRAFT_0465 0.84 +4.3 468,797 + B158DRAFT_0465 0.86 +4.7 468,798 + B158DRAFT_0465 0.86 +4.0 468,805 - B158DRAFT_0465 0.87 +2.8 468,805 - B158DRAFT_0465 0.87 +4.0 468,805 - B158DRAFT_0465 0.87 +3.9 468,842 + +3.8 469,107 - B158DRAFT_0466 0.14 -0.2 469,141 - B158DRAFT_0466 0.18 -1.1 469,141 - B158DRAFT_0466 0.18 +0.1 469,194 + B158DRAFT_0466 0.25 +0.8 469,250 + B158DRAFT_0466 0.32 -0.6 469,264 + B158DRAFT_0466 0.34 -0.7 469,277 - B158DRAFT_0466 0.35 +0.3 469,277 - B158DRAFT_0466 0.35 -0.4 469,277 - B158DRAFT_0466 0.35 -0.8 469,303 + B158DRAFT_0466 0.38 +0.1 469,308 + B158DRAFT_0466 0.39 +0.8 469,310 + B158DRAFT_0466 0.39 +0.3 469,310 + B158DRAFT_0466 0.39 -0.1 469,316 - B158DRAFT_0466 0.40 +0.5 469,316 - B158DRAFT_0466 0.40 +0.1 469,336 - B158DRAFT_0466 0.43 -0.5 469,376 + B158DRAFT_0466 0.48 +0.7 469,376 + B158DRAFT_0466 0.48 +0.0 469,376 + B158DRAFT_0466 0.48 -0.1 469,376 + B158DRAFT_0466 0.48 -0.7 469,376 + B158DRAFT_0466 0.48 -0.0 469,376 + B158DRAFT_0466 0.48 +0.3 469,384 - B158DRAFT_0466 0.49 -0.3 469,415 + B158DRAFT_0466 0.53 -1.1 469,415 + B158DRAFT_0466 0.53 +0.1 469,423 - B158DRAFT_0466 0.54 -0.2 469,423 - B158DRAFT_0466 0.54 +0.4 469,423 - B158DRAFT_0466 0.54 -0.1 469,454 + B158DRAFT_0466 0.57 -0.1 469,462 - B158DRAFT_0466 0.58 -1.4 469,466 - B158DRAFT_0466 0.59 +0.6 469,540 + B158DRAFT_0466 0.68 +0.0 469,575 + B158DRAFT_0466 0.73 -0.3 469,575 + B158DRAFT_0466 0.73 -0.2 469,676 + B158DRAFT_0466 0.85 -0.3 469,676 + B158DRAFT_0466 0.85 +0.0 469,676 + B158DRAFT_0466 0.85 +0.4 469,676 + B158DRAFT_0466 0.85 +2.3 469,684 - B158DRAFT_0466 0.86 -0.0 469,684 - B158DRAFT_0466 0.86 +3.3 469,703 - B158DRAFT_0466 0.89 -0.4 469,703 - B158DRAFT_0466 0.89 -0.5 469,703 - B158DRAFT_0466 0.89 -0.3 469,703 - B158DRAFT_0466 0.89 +0.1 469,705 + B158DRAFT_0466 0.89 -0.3 469,757 - -0.2 469,794 + -0.9 469,825 - -2.0 469,875 + B158DRAFT_0467 0.17 -1.5 469,883 - B158DRAFT_0467 0.18 +0.7 469,883 - B158DRAFT_0467 0.18 -0.3 469,885 + B158DRAFT_0467 0.18 -0.2 469,888 + B158DRAFT_0467 0.19 -0.0
Or see this region's nucleotide sequence