Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0203

Experiment: m.b. Tetracycline 0.4 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0202 and B158DRAFT_0203 are separated by 362 nucleotidesB158DRAFT_0203 and B158DRAFT_0204 are separated by 172 nucleotides B158DRAFT_0202: B158DRAFT_0202 - Heat shock protein, at 207,186 to 208,193 _0202 B158DRAFT_0203: B158DRAFT_0203 - tRNA (guanine-N(7)-)-methyltransferase, at 208,556 to 209,257 _0203 B158DRAFT_0204: B158DRAFT_0204 - Di- and tricarboxylate transporters, at 209,430 to 211,259 _0204 Position (kb) 208 209 210Strain fitness (log2 ratio) -2 -1 0 1 2at 207.603 kb on + strand, within B158DRAFT_0202at 207.739 kb on + strand, within B158DRAFT_0202at 207.739 kb on + strand, within B158DRAFT_0202at 207.747 kb on - strand, within B158DRAFT_0202at 207.753 kb on - strand, within B158DRAFT_0202at 207.778 kb on + strand, within B158DRAFT_0202at 207.791 kb on + strand, within B158DRAFT_0202at 207.811 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.850 kb on - strand, within B158DRAFT_0202at 207.882 kb on - strand, within B158DRAFT_0202at 207.922 kb on + strand, within B158DRAFT_0202at 207.930 kb on - strand, within B158DRAFT_0202at 207.930 kb on - strand, within B158DRAFT_0202at 207.962 kb on - strand, within B158DRAFT_0202at 208.033 kb on - strand, within B158DRAFT_0202at 208.053 kb on - strand, within B158DRAFT_0202at 208.365 kb on - strandat 208.422 kb on + strandat 208.422 kb on + strandat 208.422 kb on + strandat 208.422 kb on + strandat 208.428 kb on - strandat 208.430 kb on - strandat 208.430 kb on - strandat 208.591 kb on + strandat 208.599 kb on - strandat 208.606 kb on - strandat 208.636 kb on + strand, within B158DRAFT_0203at 208.709 kb on + strand, within B158DRAFT_0203at 208.727 kb on - strand, within B158DRAFT_0203at 208.958 kb on + strand, within B158DRAFT_0203at 208.961 kb on - strand, within B158DRAFT_0203at 208.965 kb on - strand, within B158DRAFT_0203at 208.965 kb on - strand, within B158DRAFT_0203at 208.965 kb on - strand, within B158DRAFT_0203at 208.980 kb on + strand, within B158DRAFT_0203at 208.980 kb on + strand, within B158DRAFT_0203at 209.022 kb on + strand, within B158DRAFT_0203at 209.022 kb on + strand, within B158DRAFT_0203at 209.022 kb on + strand, within B158DRAFT_0203at 209.030 kb on - strand, within B158DRAFT_0203at 209.051 kb on - strand, within B158DRAFT_0203at 209.178 kb on - strand, within B158DRAFT_0203at 209.200 kb on + strandat 209.200 kb on + strandat 209.200 kb on + strandat 209.325 kb on + strandat 209.325 kb on + strandat 209.333 kb on - strandat 209.333 kb on - strandat 209.372 kb on + strandat 209.388 kb on - strandat 209.561 kb on - strandat 209.561 kb on - strandat 209.568 kb on - strandat 209.580 kb on - strandat 209.611 kb on - strandat 209.618 kb on - strand, within B158DRAFT_0204at 209.696 kb on - strand, within B158DRAFT_0204at 209.701 kb on - strand, within B158DRAFT_0204at 209.709 kb on - strand, within B158DRAFT_0204at 209.883 kb on + strand, within B158DRAFT_0204at 209.891 kb on - strand, within B158DRAFT_0204at 209.891 kb on - strand, within B158DRAFT_0204at 209.965 kb on - strand, within B158DRAFT_0204at 210.010 kb on + strand, within B158DRAFT_0204at 210.060 kb on - strand, within B158DRAFT_0204at 210.206 kb on + strand, within B158DRAFT_0204at 210.206 kb on + strand, within B158DRAFT_0204at 210.206 kb on + strand, within B158DRAFT_0204at 210.206 kb on + strand, within B158DRAFT_0204at 210.214 kb on - strand, within B158DRAFT_0204at 210.214 kb on - strand, within B158DRAFT_0204

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.4 mg/ml
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207,603 + B158DRAFT_0202 0.41 -0.0
207,739 + B158DRAFT_0202 0.55 -0.9
207,739 + B158DRAFT_0202 0.55 -0.5
207,747 - B158DRAFT_0202 0.56 -0.3
207,753 - B158DRAFT_0202 0.56 -0.1
207,778 + B158DRAFT_0202 0.59 -0.3
207,791 + B158DRAFT_0202 0.60 -0.1
207,811 + B158DRAFT_0202 0.62 -1.3
207,834 + B158DRAFT_0202 0.64 +0.6
207,834 + B158DRAFT_0202 0.64 +0.1
207,834 + B158DRAFT_0202 0.64 -1.0
207,834 + B158DRAFT_0202 0.64 -0.4
207,834 + B158DRAFT_0202 0.64 -0.4
207,834 + B158DRAFT_0202 0.64 -0.8
207,834 + B158DRAFT_0202 0.64 +0.1
207,834 + B158DRAFT_0202 0.64 -0.5
207,834 + B158DRAFT_0202 0.64 -0.6
207,834 + B158DRAFT_0202 0.64 +0.3
207,834 + B158DRAFT_0202 0.64 -0.3
207,834 + B158DRAFT_0202 0.64 -0.0
207,834 + B158DRAFT_0202 0.64 +0.1
207,834 + B158DRAFT_0202 0.64 +0.2
207,842 - B158DRAFT_0202 0.65 -1.2
207,842 - B158DRAFT_0202 0.65 +0.8
207,842 - B158DRAFT_0202 0.65 -1.0
207,842 - B158DRAFT_0202 0.65 +0.0
207,842 - B158DRAFT_0202 0.65 +0.1
207,842 - B158DRAFT_0202 0.65 -0.1
207,842 - B158DRAFT_0202 0.65 +0.4
207,842 - B158DRAFT_0202 0.65 +2.2
207,842 - B158DRAFT_0202 0.65 -0.1
207,842 - B158DRAFT_0202 0.65 +1.2
207,842 - B158DRAFT_0202 0.65 +1.0
207,842 - B158DRAFT_0202 0.65 +0.0
207,842 - B158DRAFT_0202 0.65 -0.2
207,842 - B158DRAFT_0202 0.65 -0.7
207,842 - B158DRAFT_0202 0.65 -0.8
207,842 - B158DRAFT_0202 0.65 -0.5
207,842 - B158DRAFT_0202 0.65 +0.2
207,850 - B158DRAFT_0202 0.66 -0.6
207,882 - B158DRAFT_0202 0.69 +1.2
207,922 + B158DRAFT_0202 0.73 -0.6
207,930 - B158DRAFT_0202 0.74 -0.5
207,930 - B158DRAFT_0202 0.74 -0.2
207,962 - B158DRAFT_0202 0.77 -0.4
208,033 - B158DRAFT_0202 0.84 -0.4
208,053 - B158DRAFT_0202 0.86 +0.1
208,365 - +0.8
208,422 + +0.2
208,422 + -0.6
208,422 + +0.1
208,422 + -0.8
208,428 - -0.1
208,430 - -0.9
208,430 - -0.6
208,591 + -0.3
208,599 - -0.3
208,606 - +0.3
208,636 + B158DRAFT_0203 0.11 +0.1
208,709 + B158DRAFT_0203 0.22 +0.6
208,727 - B158DRAFT_0203 0.24 +1.0
208,958 + B158DRAFT_0203 0.57 +0.1
208,961 - B158DRAFT_0203 0.58 -0.4
208,965 - B158DRAFT_0203 0.58 +1.0
208,965 - B158DRAFT_0203 0.58 -0.1
208,965 - B158DRAFT_0203 0.58 +1.0
208,980 + B158DRAFT_0203 0.60 -0.5
208,980 + B158DRAFT_0203 0.60 -0.3
209,022 + B158DRAFT_0203 0.66 +0.7
209,022 + B158DRAFT_0203 0.66 -0.5
209,022 + B158DRAFT_0203 0.66 +0.8
209,030 - B158DRAFT_0203 0.68 +0.3
209,051 - B158DRAFT_0203 0.71 -0.3
209,178 - B158DRAFT_0203 0.89 -0.1
209,200 + -0.2
209,200 + -1.1
209,200 + +0.1
209,325 + -0.9
209,325 + +0.3
209,333 - -1.1
209,333 - +0.4
209,372 + -0.4
209,388 - -0.2
209,561 - -0.4
209,561 - +1.0
209,568 - -0.2
209,580 - -0.6
209,611 - -0.8
209,618 - B158DRAFT_0204 0.10 -0.4
209,696 - B158DRAFT_0204 0.15 +1.1
209,701 - B158DRAFT_0204 0.15 +0.6
209,709 - B158DRAFT_0204 0.15 -0.4
209,883 + B158DRAFT_0204 0.25 -2.0
209,891 - B158DRAFT_0204 0.25 +0.6
209,891 - B158DRAFT_0204 0.25 +1.2
209,965 - B158DRAFT_0204 0.29 -0.1
210,010 + B158DRAFT_0204 0.32 -1.4
210,060 - B158DRAFT_0204 0.34 -0.4
210,206 + B158DRAFT_0204 0.42 -2.0
210,206 + B158DRAFT_0204 0.42 +0.1
210,206 + B158DRAFT_0204 0.42 -1.5
210,206 + B158DRAFT_0204 0.42 +0.1
210,214 - B158DRAFT_0204 0.43 -1.6
210,214 - B158DRAFT_0204 0.43 +0.8

Or see this region's nucleotide sequence