Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2477

Experiment: m.b. Tetracycline 0.2 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2475 and B158DRAFT_2477 are separated by 893 nucleotidesB158DRAFT_2477 and B158DRAFT_2478 are separated by 285 nucleotides B158DRAFT_2475: B158DRAFT_2475 - alkaline phosphatase (EC 3.1.3.1), at 657,381 to 658,997 _2475 B158DRAFT_2477: B158DRAFT_2477 - hypothetical protein, at 659,891 to 660,388 _2477 B158DRAFT_2478: B158DRAFT_2478 - DNA polymerase III, subunit gamma and tau, at 660,674 to 662,932 _2478 Position (kb) 659 660 661Strain fitness (log2 ratio) -1 0 1at 658.902 kb on + strandat 658.902 kb on - strandat 658.904 kb on - strandat 658.910 kb on - strandat 658.910 kb on - strandat 658.950 kb on - strandat 659.139 kb on + strandat 659.192 kb on + strandat 659.200 kb on - strandat 659.324 kb on - strandat 659.359 kb on + strandat 659.607 kb on - strandat 659.641 kb on - strandat 659.668 kb on - strandat 659.877 kb on + strandat 659.877 kb on + strandat 659.877 kb on + strandat 659.877 kb on + strandat 659.954 kb on + strand, within B158DRAFT_2477at 659.954 kb on + strand, within B158DRAFT_2477at 659.962 kb on - strand, within B158DRAFT_2477at 659.968 kb on + strand, within B158DRAFT_2477at 659.977 kb on + strand, within B158DRAFT_2477at 659.985 kb on + strand, within B158DRAFT_2477at 659.985 kb on - strand, within B158DRAFT_2477at 659.993 kb on - strand, within B158DRAFT_2477at 660.048 kb on - strand, within B158DRAFT_2477at 660.053 kb on - strand, within B158DRAFT_2477at 660.066 kb on + strand, within B158DRAFT_2477at 660.126 kb on - strand, within B158DRAFT_2477at 660.246 kb on + strand, within B158DRAFT_2477at 660.268 kb on + strand, within B158DRAFT_2477at 660.268 kb on + strand, within B158DRAFT_2477at 660.286 kb on - strand, within B158DRAFT_2477at 660.313 kb on - strand, within B158DRAFT_2477at 660.423 kb on + strandat 660.477 kb on + strandat 660.477 kb on + strandat 660.485 kb on - strandat 660.497 kb on - strandat 660.526 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.2 mg/ml
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658,902 + +0.1
658,902 - -0.1
658,904 - -1.4
658,910 - +0.3
658,910 - +0.7
658,950 - -0.4
659,139 + -0.9
659,192 + -0.7
659,200 - +0.3
659,324 - -0.6
659,359 + -0.5
659,607 - +0.2
659,641 - -0.0
659,668 - -0.1
659,877 + -0.5
659,877 + +0.0
659,877 + -0.0
659,877 + -0.9
659,954 + B158DRAFT_2477 0.13 -0.2
659,954 + B158DRAFT_2477 0.13 +1.1
659,962 - B158DRAFT_2477 0.14 +0.5
659,968 + B158DRAFT_2477 0.15 +0.1
659,977 + B158DRAFT_2477 0.17 +1.2
659,985 + B158DRAFT_2477 0.19 -0.3
659,985 - B158DRAFT_2477 0.19 -0.2
659,993 - B158DRAFT_2477 0.20 -0.1
660,048 - B158DRAFT_2477 0.32 -0.3
660,053 - B158DRAFT_2477 0.33 +0.0
660,066 + B158DRAFT_2477 0.35 -0.3
660,126 - B158DRAFT_2477 0.47 +0.9
660,246 + B158DRAFT_2477 0.71 -1.4
660,268 + B158DRAFT_2477 0.76 -0.4
660,268 + B158DRAFT_2477 0.76 +0.3
660,286 - B158DRAFT_2477 0.79 +1.1
660,313 - B158DRAFT_2477 0.85 -0.8
660,423 + -0.1
660,477 + -0.9
660,477 + -0.4
660,485 - +0.7
660,497 - +0.0
660,526 + -0.2

Or see this region's nucleotide sequence