Experiment: m.b. Tetracycline 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2399 and B158DRAFT_2400 are separated by 37 nucleotides B158DRAFT_2400 and B158DRAFT_2401 are separated by 138 nucleotides
B158DRAFT_2399: B158DRAFT_2399 - Obg family GTPase CgtA, at 570,238 to 571,509
_2399
B158DRAFT_2400: B158DRAFT_2400 - Uncharacterized conserved protein, at 571,547 to 572,089
_2400
B158DRAFT_2401: B158DRAFT_2401 - Protein of unknown function (DUF1329)., at 572,228 to 573,580
_2401
Position (kb) 571
572
573 Strain fitness (log2 ratio) -1
0
1
2
3 at 571.294 kb on + strand, within B158DRAFT_2399 at 571.302 kb on - strand, within B158DRAFT_2399 at 571.342 kb on + strand, within B158DRAFT_2399 at 571.473 kb on + strand at 571.595 kb on + strand at 571.595 kb on + strand at 571.595 kb on + strand at 571.615 kb on + strand, within B158DRAFT_2400 at 571.618 kb on - strand, within B158DRAFT_2400 at 571.623 kb on - strand, within B158DRAFT_2400 at 571.733 kb on + strand, within B158DRAFT_2400 at 571.733 kb on + strand, within B158DRAFT_2400 at 571.836 kb on + strand, within B158DRAFT_2400 at 571.975 kb on + strand, within B158DRAFT_2400 at 572.118 kb on - strand at 572.157 kb on + strand at 572.157 kb on + strand at 572.163 kb on - strand at 572.165 kb on - strand at 572.165 kb on - strand at 572.165 kb on - strand at 572.165 kb on - strand at 572.194 kb on + strand at 572.196 kb on + strand at 572.202 kb on - strand at 572.202 kb on - strand at 572.242 kb on - strand at 572.281 kb on - strand at 572.312 kb on + strand at 572.359 kb on + strand at 572.375 kb on - strand, within B158DRAFT_2401 at 572.411 kb on - strand, within B158DRAFT_2401 at 572.421 kb on + strand, within B158DRAFT_2401 at 572.421 kb on + strand, within B158DRAFT_2401 at 572.421 kb on + strand, within B158DRAFT_2401 at 572.429 kb on - strand, within B158DRAFT_2401 at 572.431 kb on - strand, within B158DRAFT_2401 at 572.455 kb on + strand, within B158DRAFT_2401 at 572.525 kb on + strand, within B158DRAFT_2401 at 572.552 kb on - strand, within B158DRAFT_2401 at 572.576 kb on + strand, within B158DRAFT_2401 at 572.578 kb on - strand, within B158DRAFT_2401 at 572.583 kb on - strand, within B158DRAFT_2401 at 572.584 kb on - strand, within B158DRAFT_2401 at 572.590 kb on + strand, within B158DRAFT_2401 at 572.603 kb on - strand, within B158DRAFT_2401 at 572.623 kb on + strand, within B158DRAFT_2401 at 572.623 kb on - strand, within B158DRAFT_2401 at 572.628 kb on + strand, within B158DRAFT_2401 at 572.636 kb on - strand, within B158DRAFT_2401 at 572.636 kb on - strand, within B158DRAFT_2401 at 572.803 kb on + strand, within B158DRAFT_2401 at 572.816 kb on + strand, within B158DRAFT_2401 at 572.853 kb on - strand, within B158DRAFT_2401 at 572.855 kb on + strand, within B158DRAFT_2401 at 572.898 kb on + strand, within B158DRAFT_2401 at 572.927 kb on - strand, within B158DRAFT_2401 at 572.948 kb on - strand, within B158DRAFT_2401 at 572.958 kb on - strand, within B158DRAFT_2401 at 572.979 kb on + strand, within B158DRAFT_2401 at 572.989 kb on + strand, within B158DRAFT_2401 at 572.989 kb on + strand, within B158DRAFT_2401 at 572.997 kb on + strand, within B158DRAFT_2401 at 573.007 kb on + strand, within B158DRAFT_2401 at 573.012 kb on + strand, within B158DRAFT_2401 at 573.020 kb on - strand, within B158DRAFT_2401 at 573.020 kb on - strand, within B158DRAFT_2401 at 573.054 kb on - strand, within B158DRAFT_2401 at 573.060 kb on - strand, within B158DRAFT_2401 at 573.087 kb on - strand, within B158DRAFT_2401
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.2 mg/ml remove 571,294 + B158DRAFT_2399 0.83 +0.4 571,302 - B158DRAFT_2399 0.84 -0.4 571,342 + B158DRAFT_2399 0.87 +0.8 571,473 + -0.6 571,595 + -0.2 571,595 + +0.6 571,595 + -0.1 571,615 + B158DRAFT_2400 0.13 -0.5 571,618 - B158DRAFT_2400 0.13 -0.5 571,623 - B158DRAFT_2400 0.14 -1.6 571,733 + B158DRAFT_2400 0.34 -0.4 571,733 + B158DRAFT_2400 0.34 -0.8 571,836 + B158DRAFT_2400 0.53 -0.8 571,975 + B158DRAFT_2400 0.79 -0.8 572,118 - +0.0 572,157 + +0.7 572,157 + +0.3 572,163 - +0.3 572,165 - -0.2 572,165 - +0.4 572,165 - +0.2 572,165 - -0.0 572,194 + -0.5 572,196 + -0.6 572,202 - +0.4 572,202 - -0.3 572,242 - -0.1 572,281 - -0.1 572,312 + +0.1 572,359 + -0.5 572,375 - B158DRAFT_2401 0.11 -0.9 572,411 - B158DRAFT_2401 0.14 -0.4 572,421 + B158DRAFT_2401 0.14 +0.1 572,421 + B158DRAFT_2401 0.14 +0.4 572,421 + B158DRAFT_2401 0.14 -0.7 572,429 - B158DRAFT_2401 0.15 +0.5 572,431 - B158DRAFT_2401 0.15 -0.0 572,455 + B158DRAFT_2401 0.17 -0.5 572,525 + B158DRAFT_2401 0.22 +0.3 572,552 - B158DRAFT_2401 0.24 +0.6 572,576 + B158DRAFT_2401 0.26 -0.0 572,578 - B158DRAFT_2401 0.26 +0.2 572,583 - B158DRAFT_2401 0.26 -0.5 572,584 - B158DRAFT_2401 0.26 +3.5 572,590 + B158DRAFT_2401 0.27 -0.3 572,603 - B158DRAFT_2401 0.28 -0.5 572,623 + B158DRAFT_2401 0.29 +0.7 572,623 - B158DRAFT_2401 0.29 -1.0 572,628 + B158DRAFT_2401 0.30 +0.6 572,636 - B158DRAFT_2401 0.30 +0.2 572,636 - B158DRAFT_2401 0.30 -0.9 572,803 + B158DRAFT_2401 0.42 -0.3 572,816 + B158DRAFT_2401 0.43 +0.5 572,853 - B158DRAFT_2401 0.46 -0.3 572,855 + B158DRAFT_2401 0.46 +1.1 572,898 + B158DRAFT_2401 0.50 -0.2 572,927 - B158DRAFT_2401 0.52 +0.0 572,948 - B158DRAFT_2401 0.53 -0.9 572,958 - B158DRAFT_2401 0.54 -0.1 572,979 + B158DRAFT_2401 0.56 +0.2 572,989 + B158DRAFT_2401 0.56 -1.1 572,989 + B158DRAFT_2401 0.56 -0.3 572,997 + B158DRAFT_2401 0.57 -0.7 573,007 + B158DRAFT_2401 0.58 +0.1 573,012 + B158DRAFT_2401 0.58 +0.3 573,020 - B158DRAFT_2401 0.59 -0.7 573,020 - B158DRAFT_2401 0.59 +0.6 573,054 - B158DRAFT_2401 0.61 +0.2 573,060 - B158DRAFT_2401 0.61 -0.6 573,087 - B158DRAFT_2401 0.63 -0.2
Or see this region's nucleotide sequence