Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2113

Experiment: m.b. Tetracycline 0.2 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2112 and B158DRAFT_2113 are separated by 369 nucleotidesB158DRAFT_2113 and B158DRAFT_2114 are separated by 2 nucleotidesB158DRAFT_2114 and B158DRAFT_2115 overlap by 4 nucleotides B158DRAFT_2112: B158DRAFT_2112 - Protein of Unknown function (DUF2784)., at 244,488 to 244,898 _2112 B158DRAFT_2113: B158DRAFT_2113 - mraZ protein, at 245,268 to 245,723 _2113 B158DRAFT_2114: B158DRAFT_2114 - S-adenosyl-methyltransferase MraW, at 245,726 to 246,661 _2114 B158DRAFT_2115: B158DRAFT_2115 - cell division protein FtsL, at 246,658 to 247,014 _2115 Position (kb) 245 246Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 244.295 kb on + strandat 244.295 kb on + strandat 244.326 kb on - strandat 244.365 kb on + strandat 244.368 kb on - strandat 244.373 kb on - strandat 244.373 kb on - strandat 244.373 kb on - strandat 244.410 kb on + strandat 244.410 kb on + strandat 244.418 kb on - strandat 244.418 kb on - strandat 244.418 kb on - strandat 244.418 kb on - strandat 244.418 kb on - strandat 244.486 kb on + strandat 244.537 kb on + strand, within B158DRAFT_2112at 244.577 kb on - strand, within B158DRAFT_2112at 244.590 kb on - strand, within B158DRAFT_2112at 244.630 kb on - strand, within B158DRAFT_2112at 244.673 kb on + strand, within B158DRAFT_2112at 244.673 kb on + strand, within B158DRAFT_2112at 244.673 kb on + strand, within B158DRAFT_2112at 244.673 kb on + strand, within B158DRAFT_2112at 244.681 kb on - strand, within B158DRAFT_2112at 244.681 kb on - strand, within B158DRAFT_2112at 244.686 kb on - strand, within B158DRAFT_2112at 244.795 kb on - strand, within B158DRAFT_2112at 244.820 kb on + strand, within B158DRAFT_2112at 244.820 kb on + strand, within B158DRAFT_2112at 244.828 kb on - strand, within B158DRAFT_2112at 244.828 kb on - strand, within B158DRAFT_2112at 244.828 kb on - strand, within B158DRAFT_2112at 244.828 kb on - strand, within B158DRAFT_2112at 244.830 kb on - strand, within B158DRAFT_2112at 244.832 kb on + strand, within B158DRAFT_2112at 244.850 kb on + strand, within B158DRAFT_2112at 244.858 kb on - strandat 244.858 kb on - strandat 244.864 kb on + strandat 244.864 kb on + strandat 244.871 kb on + strandat 244.872 kb on - strandat 244.872 kb on - strandat 244.872 kb on - strandat 244.879 kb on - strandat 244.914 kb on + strandat 244.914 kb on + strandat 244.921 kb on + strandat 244.929 kb on - strandat 244.940 kb on + strandat 245.124 kb on + strandat 245.551 kb on + strand, within B158DRAFT_2113at 245.551 kb on + strand, within B158DRAFT_2113at 245.551 kb on + strand, within B158DRAFT_2113at 245.551 kb on + strand, within B158DRAFT_2113at 245.551 kb on + strand, within B158DRAFT_2113at 245.551 kb on + strand, within B158DRAFT_2113at 245.551 kb on + strand, within B158DRAFT_2113at 245.606 kb on + strand, within B158DRAFT_2113at 245.607 kb on + strand, within B158DRAFT_2113at 245.664 kb on + strand, within B158DRAFT_2113at 245.675 kb on + strand, within B158DRAFT_2113at 245.748 kb on + strandat 245.748 kb on + strandat 245.748 kb on + strandat 245.766 kb on + strandat 245.791 kb on + strandat 245.831 kb on + strand, within B158DRAFT_2114at 245.864 kb on + strand, within B158DRAFT_2114at 246.147 kb on + strand, within B158DRAFT_2114at 246.342 kb on + strand, within B158DRAFT_2114at 246.342 kb on + strand, within B158DRAFT_2114at 246.369 kb on + strand, within B158DRAFT_2114at 246.396 kb on + strand, within B158DRAFT_2114at 246.407 kb on + strand, within B158DRAFT_2114at 246.590 kb on + strandat 246.652 kb on + strandat 246.723 kb on + strand, within B158DRAFT_2115

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.2 mg/ml
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244,295 + +0.4
244,295 + +0.3
244,326 - +0.0
244,365 + +0.3
244,368 - +0.1
244,373 - -0.7
244,373 - +0.1
244,373 - +0.1
244,410 + +1.3
244,410 + -0.6
244,418 - -0.8
244,418 - +0.4
244,418 - -0.1
244,418 - +0.1
244,418 - -0.4
244,486 + -0.5
244,537 + B158DRAFT_2112 0.12 -0.4
244,577 - B158DRAFT_2112 0.22 -0.1
244,590 - B158DRAFT_2112 0.25 +0.3
244,630 - B158DRAFT_2112 0.35 -0.2
244,673 + B158DRAFT_2112 0.45 -1.8
244,673 + B158DRAFT_2112 0.45 +0.9
244,673 + B158DRAFT_2112 0.45 +1.1
244,673 + B158DRAFT_2112 0.45 -0.5
244,681 - B158DRAFT_2112 0.47 -0.8
244,681 - B158DRAFT_2112 0.47 -1.3
244,686 - B158DRAFT_2112 0.48 -0.1
244,795 - B158DRAFT_2112 0.75 -0.1
244,820 + B158DRAFT_2112 0.81 -0.6
244,820 + B158DRAFT_2112 0.81 -3.2
244,828 - B158DRAFT_2112 0.83 -0.5
244,828 - B158DRAFT_2112 0.83 +0.5
244,828 - B158DRAFT_2112 0.83 +0.0
244,828 - B158DRAFT_2112 0.83 -1.5
244,830 - B158DRAFT_2112 0.83 -0.4
244,832 + B158DRAFT_2112 0.84 -0.7
244,850 + B158DRAFT_2112 0.88 -0.3
244,858 - +0.7
244,858 - -0.4
244,864 + -0.3
244,864 + -0.9
244,871 + -0.2
244,872 - -0.3
244,872 - +1.9
244,872 - -0.4
244,879 - +0.0
244,914 + -0.6
244,914 + -0.5
244,921 + +0.2
244,929 - -0.3
244,940 + +0.0
245,124 + +0.5
245,551 + B158DRAFT_2113 0.62 -2.0
245,551 + B158DRAFT_2113 0.62 +2.1
245,551 + B158DRAFT_2113 0.62 +0.1
245,551 + B158DRAFT_2113 0.62 +2.1
245,551 + B158DRAFT_2113 0.62 -0.7
245,551 + B158DRAFT_2113 0.62 -1.2
245,551 + B158DRAFT_2113 0.62 -1.9
245,606 + B158DRAFT_2113 0.74 -0.7
245,607 + B158DRAFT_2113 0.74 -0.5
245,664 + B158DRAFT_2113 0.87 -0.9
245,675 + B158DRAFT_2113 0.89 -0.2
245,748 + -0.7
245,748 + -2.8
245,748 + -0.3
245,766 + +3.1
245,791 + -0.5
245,831 + B158DRAFT_2114 0.11 -1.2
245,864 + B158DRAFT_2114 0.15 -1.7
246,147 + B158DRAFT_2114 0.45 +1.3
246,342 + B158DRAFT_2114 0.66 +2.1
246,342 + B158DRAFT_2114 0.66 -1.5
246,369 + B158DRAFT_2114 0.69 -0.9
246,396 + B158DRAFT_2114 0.72 +1.1
246,407 + B158DRAFT_2114 0.73 -0.2
246,590 + +0.8
246,652 + +2.1
246,723 + B158DRAFT_2115 0.18 -0.7

Or see this region's nucleotide sequence