Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2024

Experiment: m.b. Tetracycline 0.2 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2023 and B158DRAFT_2024 are separated by 69 nucleotidesB158DRAFT_2024 and B158DRAFT_2025 are separated by 76 nucleotidesB158DRAFT_2025 and B158DRAFT_2026 are separated by 41 nucleotides B158DRAFT_2023: B158DRAFT_2023 - Zn-dependent hydrolases, including glyoxylases, at 153,250 to 154,173 _2023 B158DRAFT_2024: B158DRAFT_2024 - 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway), at 154,243 to 154,977 _2024 B158DRAFT_2025: B158DRAFT_2025 - Uncharacterized protein conserved in bacteria, at 155,054 to 155,488 _2025 B158DRAFT_2026: B158DRAFT_2026 - Uncharacterized protein conserved in bacteria, at 155,530 to 156,549 _2026 Position (kb) 154 155Strain fitness (log2 ratio) -2 -1 0 1 2at 153.315 kb on - strandat 153.326 kb on - strandat 153.336 kb on - strandat 153.350 kb on + strand, within B158DRAFT_2023at 153.353 kb on - strand, within B158DRAFT_2023at 153.357 kb on - strand, within B158DRAFT_2023at 153.376 kb on + strand, within B158DRAFT_2023at 153.381 kb on + strand, within B158DRAFT_2023at 153.435 kb on + strand, within B158DRAFT_2023at 153.480 kb on - strand, within B158DRAFT_2023at 153.613 kb on - strand, within B158DRAFT_2023at 153.709 kb on + strand, within B158DRAFT_2023at 153.734 kb on + strand, within B158DRAFT_2023at 153.742 kb on - strand, within B158DRAFT_2023at 153.742 kb on - strand, within B158DRAFT_2023at 153.780 kb on + strand, within B158DRAFT_2023at 153.782 kb on - strand, within B158DRAFT_2023at 153.788 kb on - strand, within B158DRAFT_2023at 153.788 kb on - strand, within B158DRAFT_2023at 153.826 kb on + strand, within B158DRAFT_2023at 153.831 kb on + strand, within B158DRAFT_2023at 153.834 kb on - strand, within B158DRAFT_2023at 153.874 kb on + strand, within B158DRAFT_2023at 153.903 kb on - strand, within B158DRAFT_2023at 153.973 kb on + strand, within B158DRAFT_2023at 154.168 kb on + strandat 154.177 kb on + strandat 154.185 kb on - strandat 154.273 kb on + strandat 154.315 kb on + strandat 154.322 kb on - strand, within B158DRAFT_2024at 154.322 kb on - strand, within B158DRAFT_2024at 154.322 kb on - strand, within B158DRAFT_2024at 154.323 kb on + strand, within B158DRAFT_2024at 154.545 kb on + strand, within B158DRAFT_2024at 154.597 kb on - strand, within B158DRAFT_2024at 154.599 kb on + strand, within B158DRAFT_2024at 154.599 kb on + strand, within B158DRAFT_2024at 154.599 kb on + strand, within B158DRAFT_2024at 154.599 kb on + strand, within B158DRAFT_2024at 154.599 kb on + strand, within B158DRAFT_2024at 154.599 kb on + strand, within B158DRAFT_2024at 154.605 kb on + strand, within B158DRAFT_2024at 154.607 kb on - strand, within B158DRAFT_2024at 154.607 kb on - strand, within B158DRAFT_2024at 154.607 kb on - strand, within B158DRAFT_2024at 154.640 kb on - strand, within B158DRAFT_2024at 154.649 kb on - strand, within B158DRAFT_2024at 154.733 kb on - strand, within B158DRAFT_2024at 154.748 kb on + strand, within B158DRAFT_2024at 154.784 kb on + strand, within B158DRAFT_2024at 154.794 kb on + strand, within B158DRAFT_2024at 154.802 kb on - strand, within B158DRAFT_2024at 154.802 kb on - strand, within B158DRAFT_2024at 154.802 kb on - strand, within B158DRAFT_2024at 154.803 kb on - strand, within B158DRAFT_2024at 154.813 kb on + strand, within B158DRAFT_2024at 154.813 kb on + strand, within B158DRAFT_2024at 154.821 kb on - strand, within B158DRAFT_2024at 154.828 kb on + strand, within B158DRAFT_2024at 154.831 kb on - strand, within B158DRAFT_2024at 154.841 kb on + strand, within B158DRAFT_2024at 154.932 kb on + strandat 155.000 kb on - strandat 155.010 kb on + strandat 155.187 kb on - strand, within B158DRAFT_2025at 155.256 kb on + strand, within B158DRAFT_2025at 155.256 kb on + strand, within B158DRAFT_2025at 155.256 kb on + strand, within B158DRAFT_2025at 155.280 kb on + strand, within B158DRAFT_2025at 155.310 kb on - strand, within B158DRAFT_2025at 155.385 kb on + strand, within B158DRAFT_2025at 155.385 kb on + strand, within B158DRAFT_2025at 155.385 kb on + strand, within B158DRAFT_2025at 155.393 kb on - strand, within B158DRAFT_2025at 155.393 kb on - strand, within B158DRAFT_2025at 155.397 kb on + strand, within B158DRAFT_2025at 155.408 kb on + strand, within B158DRAFT_2025at 155.415 kb on - strand, within B158DRAFT_2025at 155.463 kb on + strandat 155.492 kb on - strandat 155.502 kb on - strandat 155.517 kb on - strandat 155.517 kb on - strandat 155.532 kb on + strandat 155.573 kb on + strandat 155.581 kb on - strandat 155.677 kb on + strand, within B158DRAFT_2026at 155.687 kb on + strand, within B158DRAFT_2026at 155.687 kb on + strand, within B158DRAFT_2026at 155.687 kb on + strand, within B158DRAFT_2026at 155.695 kb on - strand, within B158DRAFT_2026at 155.695 kb on - strand, within B158DRAFT_2026at 155.893 kb on + strand, within B158DRAFT_2026at 155.894 kb on - strand, within B158DRAFT_2026at 155.918 kb on - strand, within B158DRAFT_2026

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.2 mg/ml
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153,315 - +0.8
153,326 - +0.1
153,336 - +0.6
153,350 + B158DRAFT_2023 0.11 +0.1
153,353 - B158DRAFT_2023 0.11 -0.2
153,357 - B158DRAFT_2023 0.12 -0.9
153,376 + B158DRAFT_2023 0.14 +1.2
153,381 + B158DRAFT_2023 0.14 -0.5
153,435 + B158DRAFT_2023 0.20 +0.0
153,480 - B158DRAFT_2023 0.25 +0.0
153,613 - B158DRAFT_2023 0.39 -0.0
153,709 + B158DRAFT_2023 0.50 +0.4
153,734 + B158DRAFT_2023 0.52 +0.1
153,742 - B158DRAFT_2023 0.53 -0.4
153,742 - B158DRAFT_2023 0.53 +0.4
153,780 + B158DRAFT_2023 0.57 -0.4
153,782 - B158DRAFT_2023 0.58 +0.5
153,788 - B158DRAFT_2023 0.58 -0.5
153,788 - B158DRAFT_2023 0.58 -2.1
153,826 + B158DRAFT_2023 0.62 -2.0
153,831 + B158DRAFT_2023 0.63 -0.5
153,834 - B158DRAFT_2023 0.63 -0.5
153,874 + B158DRAFT_2023 0.68 +0.6
153,903 - B158DRAFT_2023 0.71 -0.2
153,973 + B158DRAFT_2023 0.78 -0.4
154,168 + +0.0
154,177 + -0.3
154,185 - -0.2
154,273 + +0.5
154,315 + -0.0
154,322 - B158DRAFT_2024 0.11 -0.4
154,322 - B158DRAFT_2024 0.11 -1.0
154,322 - B158DRAFT_2024 0.11 -1.2
154,323 + B158DRAFT_2024 0.11 -0.7
154,545 + B158DRAFT_2024 0.41 -0.7
154,597 - B158DRAFT_2024 0.48 -1.2
154,599 + B158DRAFT_2024 0.48 -0.6
154,599 + B158DRAFT_2024 0.48 +1.1
154,599 + B158DRAFT_2024 0.48 -0.3
154,599 + B158DRAFT_2024 0.48 -0.6
154,599 + B158DRAFT_2024 0.48 -0.8
154,599 + B158DRAFT_2024 0.48 +0.0
154,605 + B158DRAFT_2024 0.49 +0.4
154,607 - B158DRAFT_2024 0.50 +0.0
154,607 - B158DRAFT_2024 0.50 -0.4
154,607 - B158DRAFT_2024 0.50 +0.1
154,640 - B158DRAFT_2024 0.54 -0.4
154,649 - B158DRAFT_2024 0.55 -0.4
154,733 - B158DRAFT_2024 0.67 -0.7
154,748 + B158DRAFT_2024 0.69 +1.1
154,784 + B158DRAFT_2024 0.74 +0.2
154,794 + B158DRAFT_2024 0.75 -0.5
154,802 - B158DRAFT_2024 0.76 -0.3
154,802 - B158DRAFT_2024 0.76 -0.6
154,802 - B158DRAFT_2024 0.76 -0.6
154,803 - B158DRAFT_2024 0.76 +0.0
154,813 + B158DRAFT_2024 0.78 -0.8
154,813 + B158DRAFT_2024 0.78 +0.0
154,821 - B158DRAFT_2024 0.79 -0.2
154,828 + B158DRAFT_2024 0.80 -0.8
154,831 - B158DRAFT_2024 0.80 -0.1
154,841 + B158DRAFT_2024 0.81 -1.1
154,932 + -0.7
155,000 - +0.3
155,010 + +0.3
155,187 - B158DRAFT_2025 0.31 +2.1
155,256 + B158DRAFT_2025 0.46 -0.6
155,256 + B158DRAFT_2025 0.46 +0.1
155,256 + B158DRAFT_2025 0.46 -0.2
155,280 + B158DRAFT_2025 0.52 +0.0
155,310 - B158DRAFT_2025 0.59 +0.5
155,385 + B158DRAFT_2025 0.76 -1.1
155,385 + B158DRAFT_2025 0.76 +0.2
155,385 + B158DRAFT_2025 0.76 +0.2
155,393 - B158DRAFT_2025 0.78 -0.2
155,393 - B158DRAFT_2025 0.78 +0.1
155,397 + B158DRAFT_2025 0.79 +0.0
155,408 + B158DRAFT_2025 0.81 -0.4
155,415 - B158DRAFT_2025 0.83 -0.5
155,463 + +0.1
155,492 - -0.1
155,502 - +0.1
155,517 - +0.2
155,517 - -0.5
155,532 + -0.1
155,573 + +0.5
155,581 - +1.0
155,677 + B158DRAFT_2026 0.14 -0.2
155,687 + B158DRAFT_2026 0.15 -0.2
155,687 + B158DRAFT_2026 0.15 +0.6
155,687 + B158DRAFT_2026 0.15 +0.5
155,695 - B158DRAFT_2026 0.16 +0.3
155,695 - B158DRAFT_2026 0.16 -0.6
155,893 + B158DRAFT_2026 0.36 -0.3
155,894 - B158DRAFT_2026 0.36 -0.2
155,918 - B158DRAFT_2026 0.38 +0.2

Or see this region's nucleotide sequence