Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2013

Experiment: m.b. Tetracycline 0.2 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2012 and B158DRAFT_2013 are separated by 14 nucleotidesB158DRAFT_2013 and B158DRAFT_2014 are separated by 1 nucleotidesB158DRAFT_2014 and B158DRAFT_2015 are separated by 30 nucleotides B158DRAFT_2012: B158DRAFT_2012 - replicative DNA helicase, at 141,823 to 143,208 _2012 B158DRAFT_2013: B158DRAFT_2013 - alanine racemase, at 143,223 to 144,317 _2013 B158DRAFT_2014: B158DRAFT_2014 - secondary thiamine-phosphate synthase enzyme, at 144,319 to 144,732 _2014 B158DRAFT_2015: B158DRAFT_2015 - hypothetical protein, at 144,763 to 145,476 _2015 Position (kb) 143 144 145Strain fitness (log2 ratio) -3 -2 -1 0 1at 143.318 kb on + strandat 143.318 kb on + strandat 143.318 kb on + strandat 143.318 kb on + strandat 143.324 kb on + strandat 143.326 kb on - strandat 143.326 kb on - strandat 143.344 kb on + strand, within B158DRAFT_2013at 143.344 kb on + strand, within B158DRAFT_2013at 143.352 kb on - strand, within B158DRAFT_2013at 143.369 kb on + strand, within B158DRAFT_2013at 143.443 kb on + strand, within B158DRAFT_2013at 143.499 kb on - strand, within B158DRAFT_2013at 143.524 kb on - strand, within B158DRAFT_2013at 143.580 kb on + strand, within B158DRAFT_2013at 143.601 kb on + strand, within B158DRAFT_2013at 143.642 kb on + strand, within B158DRAFT_2013at 143.647 kb on + strand, within B158DRAFT_2013at 143.663 kb on + strand, within B158DRAFT_2013at 143.675 kb on + strand, within B158DRAFT_2013at 143.675 kb on + strand, within B158DRAFT_2013at 143.683 kb on - strand, within B158DRAFT_2013at 143.693 kb on + strand, within B158DRAFT_2013at 143.755 kb on - strand, within B158DRAFT_2013at 143.763 kb on - strand, within B158DRAFT_2013at 143.777 kb on + strand, within B158DRAFT_2013at 143.835 kb on + strand, within B158DRAFT_2013at 143.835 kb on + strand, within B158DRAFT_2013at 143.856 kb on + strand, within B158DRAFT_2013at 143.880 kb on + strand, within B158DRAFT_2013at 143.888 kb on - strand, within B158DRAFT_2013at 144.006 kb on - strand, within B158DRAFT_2013at 144.083 kb on + strand, within B158DRAFT_2013at 144.088 kb on + strand, within B158DRAFT_2013at 144.088 kb on + strand, within B158DRAFT_2013at 144.088 kb on + strand, within B158DRAFT_2013at 144.088 kb on + strand, within B158DRAFT_2013at 144.091 kb on - strand, within B158DRAFT_2013at 144.096 kb on - strand, within B158DRAFT_2013at 144.096 kb on - strand, within B158DRAFT_2013at 144.115 kb on - strand, within B158DRAFT_2013at 144.163 kb on + strand, within B158DRAFT_2013at 144.163 kb on + strand, within B158DRAFT_2013at 144.163 kb on + strand, within B158DRAFT_2013at 144.171 kb on - strand, within B158DRAFT_2013at 144.184 kb on + strand, within B158DRAFT_2013at 144.184 kb on + strand, within B158DRAFT_2013at 144.184 kb on + strand, within B158DRAFT_2013at 144.184 kb on + strand, within B158DRAFT_2013at 144.184 kb on + strand, within B158DRAFT_2013at 144.184 kb on + strand, within B158DRAFT_2013at 144.184 kb on + strand, within B158DRAFT_2013at 144.184 kb on + strand, within B158DRAFT_2013at 144.184 kb on + strand, within B158DRAFT_2013at 144.184 kb on + strand, within B158DRAFT_2013at 144.184 kb on + strand, within B158DRAFT_2013at 144.184 kb on + strand, within B158DRAFT_2013at 144.184 kb on + strand, within B158DRAFT_2013at 144.184 kb on + strand, within B158DRAFT_2013at 144.184 kb on + strand, within B158DRAFT_2013at 144.184 kb on + strand, within B158DRAFT_2013at 144.184 kb on + strand, within B158DRAFT_2013at 144.186 kb on + strand, within B158DRAFT_2013at 144.186 kb on + strand, within B158DRAFT_2013at 144.189 kb on + strand, within B158DRAFT_2013at 144.192 kb on - strand, within B158DRAFT_2013at 144.192 kb on - strand, within B158DRAFT_2013at 144.192 kb on - strand, within B158DRAFT_2013at 144.192 kb on - strand, within B158DRAFT_2013at 144.192 kb on - strand, within B158DRAFT_2013at 144.192 kb on - strand, within B158DRAFT_2013at 144.192 kb on - strand, within B158DRAFT_2013at 144.192 kb on - strand, within B158DRAFT_2013at 144.192 kb on - strand, within B158DRAFT_2013at 144.192 kb on - strand, within B158DRAFT_2013at 144.192 kb on - strand, within B158DRAFT_2013at 144.192 kb on - strand, within B158DRAFT_2013at 144.192 kb on - strand, within B158DRAFT_2013at 144.192 kb on - strand, within B158DRAFT_2013at 144.192 kb on - strand, within B158DRAFT_2013at 144.192 kb on - strand, within B158DRAFT_2013at 144.192 kb on - strand, within B158DRAFT_2013at 144.192 kb on - strand, within B158DRAFT_2013at 144.192 kb on - strand, within B158DRAFT_2013at 144.192 kb on - strand, within B158DRAFT_2013at 144.197 kb on - strand, within B158DRAFT_2013at 144.253 kb on - strandat 144.277 kb on - strandat 144.316 kb on + strandat 144.356 kb on + strandat 144.364 kb on - strand, within B158DRAFT_2014at 144.364 kb on - strand, within B158DRAFT_2014at 144.364 kb on - strand, within B158DRAFT_2014at 144.458 kb on - strand, within B158DRAFT_2014at 144.565 kb on + strand, within B158DRAFT_2014at 144.573 kb on + strand, within B158DRAFT_2014at 144.573 kb on + strand, within B158DRAFT_2014at 144.579 kb on - strand, within B158DRAFT_2014at 144.588 kb on + strand, within B158DRAFT_2014at 144.588 kb on + strand, within B158DRAFT_2014at 144.588 kb on + strand, within B158DRAFT_2014at 144.588 kb on + strand, within B158DRAFT_2014at 144.588 kb on + strand, within B158DRAFT_2014at 144.588 kb on + strand, within B158DRAFT_2014at 144.588 kb on + strand, within B158DRAFT_2014at 144.588 kb on + strand, within B158DRAFT_2014at 144.588 kb on + strand, within B158DRAFT_2014at 144.588 kb on + strand, within B158DRAFT_2014at 144.588 kb on + strand, within B158DRAFT_2014at 144.588 kb on + strand, within B158DRAFT_2014at 144.588 kb on + strand, within B158DRAFT_2014at 144.588 kb on + strand, within B158DRAFT_2014at 144.588 kb on + strand, within B158DRAFT_2014at 144.588 kb on + strand, within B158DRAFT_2014at 144.588 kb on + strand, within B158DRAFT_2014at 144.588 kb on + strand, within B158DRAFT_2014at 144.588 kb on + strand, within B158DRAFT_2014at 144.588 kb on + strand, within B158DRAFT_2014at 144.588 kb on + strand, within B158DRAFT_2014at 144.588 kb on + strand, within B158DRAFT_2014at 144.588 kb on + strand, within B158DRAFT_2014at 144.596 kb on - strand, within B158DRAFT_2014at 144.596 kb on - strand, within B158DRAFT_2014at 144.596 kb on - strand, within B158DRAFT_2014at 144.596 kb on - strand, within B158DRAFT_2014at 144.596 kb on - strand, within B158DRAFT_2014at 144.596 kb on - strand, within B158DRAFT_2014at 144.596 kb on - strand, within B158DRAFT_2014at 144.596 kb on - strand, within B158DRAFT_2014at 144.596 kb on - strand, within B158DRAFT_2014at 144.596 kb on - strand, within B158DRAFT_2014at 144.596 kb on - strand, within B158DRAFT_2014at 144.596 kb on - strand, within B158DRAFT_2014at 144.596 kb on - strand, within B158DRAFT_2014at 144.596 kb on - strand, within B158DRAFT_2014at 144.596 kb on - strand, within B158DRAFT_2014at 144.596 kb on - strand, within B158DRAFT_2014at 144.596 kb on - strand, within B158DRAFT_2014at 144.616 kb on - strand, within B158DRAFT_2014at 144.665 kb on + strand, within B158DRAFT_2014at 144.673 kb on - strand, within B158DRAFT_2014at 144.698 kb on - strandat 144.698 kb on - strandat 144.820 kb on + strandat 144.831 kb on + strandat 144.831 kb on + strandat 144.839 kb on - strand, within B158DRAFT_2015at 144.839 kb on - strand, within B158DRAFT_2015at 144.841 kb on + strand, within B158DRAFT_2015at 144.889 kb on + strand, within B158DRAFT_2015at 144.900 kb on + strand, within B158DRAFT_2015at 144.902 kb on - strand, within B158DRAFT_2015at 144.927 kb on - strand, within B158DRAFT_2015at 144.927 kb on - strand, within B158DRAFT_2015at 144.927 kb on - strand, within B158DRAFT_2015at 144.950 kb on + strand, within B158DRAFT_2015at 144.956 kb on - strand, within B158DRAFT_2015at 144.958 kb on - strand, within B158DRAFT_2015at 144.966 kb on + strand, within B158DRAFT_2015at 145.022 kb on + strand, within B158DRAFT_2015at 145.022 kb on + strand, within B158DRAFT_2015at 145.022 kb on + strand, within B158DRAFT_2015at 145.030 kb on - strand, within B158DRAFT_2015at 145.030 kb on - strand, within B158DRAFT_2015at 145.030 kb on - strand, within B158DRAFT_2015at 145.030 kb on - strand, within B158DRAFT_2015at 145.030 kb on - strand, within B158DRAFT_2015at 145.032 kb on + strand, within B158DRAFT_2015at 145.040 kb on - strand, within B158DRAFT_2015at 145.040 kb on - strand, within B158DRAFT_2015at 145.040 kb on - strand, within B158DRAFT_2015at 145.040 kb on - strand, within B158DRAFT_2015at 145.040 kb on - strand, within B158DRAFT_2015at 145.047 kb on - strand, within B158DRAFT_2015at 145.064 kb on + strand, within B158DRAFT_2015at 145.176 kb on - strand, within B158DRAFT_2015at 145.179 kb on - strand, within B158DRAFT_2015at 145.190 kb on + strand, within B158DRAFT_2015at 145.190 kb on + strand, within B158DRAFT_2015at 145.218 kb on + strand, within B158DRAFT_2015at 145.250 kb on - strand, within B158DRAFT_2015at 145.260 kb on + strand, within B158DRAFT_2015at 145.284 kb on + strand, within B158DRAFT_2015at 145.292 kb on - strand, within B158DRAFT_2015at 145.298 kb on - strand, within B158DRAFT_2015

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.2 mg/ml
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143,318 + -0.2
143,318 + -2.1
143,318 + -1.1
143,318 + -1.0
143,324 + -1.5
143,326 - -1.6
143,326 - +0.7
143,344 + B158DRAFT_2013 0.11 -0.1
143,344 + B158DRAFT_2013 0.11 -1.3
143,352 - B158DRAFT_2013 0.12 -1.2
143,369 + B158DRAFT_2013 0.13 -1.6
143,443 + B158DRAFT_2013 0.20 -1.6
143,499 - B158DRAFT_2013 0.25 -1.8
143,524 - B158DRAFT_2013 0.27 +0.7
143,580 + B158DRAFT_2013 0.33 +0.1
143,601 + B158DRAFT_2013 0.35 -0.6
143,642 + B158DRAFT_2013 0.38 -0.7
143,647 + B158DRAFT_2013 0.39 -2.3
143,663 + B158DRAFT_2013 0.40 -0.6
143,675 + B158DRAFT_2013 0.41 -0.7
143,675 + B158DRAFT_2013 0.41 -1.0
143,683 - B158DRAFT_2013 0.42 -3.3
143,693 + B158DRAFT_2013 0.43 -1.1
143,755 - B158DRAFT_2013 0.49 -0.7
143,763 - B158DRAFT_2013 0.49 -1.2
143,777 + B158DRAFT_2013 0.51 -0.7
143,835 + B158DRAFT_2013 0.56 -1.6
143,835 + B158DRAFT_2013 0.56 -0.9
143,856 + B158DRAFT_2013 0.58 -0.8
143,880 + B158DRAFT_2013 0.60 -1.6
143,888 - B158DRAFT_2013 0.61 -0.6
144,006 - B158DRAFT_2013 0.72 -1.1
144,083 + B158DRAFT_2013 0.79 -0.9
144,088 + B158DRAFT_2013 0.79 -1.0
144,088 + B158DRAFT_2013 0.79 -0.8
144,088 + B158DRAFT_2013 0.79 -1.0
144,088 + B158DRAFT_2013 0.79 -0.2
144,091 - B158DRAFT_2013 0.79 -1.8
144,096 - B158DRAFT_2013 0.80 -1.0
144,096 - B158DRAFT_2013 0.80 -1.0
144,115 - B158DRAFT_2013 0.81 -1.0
144,163 + B158DRAFT_2013 0.86 -1.3
144,163 + B158DRAFT_2013 0.86 -0.8
144,163 + B158DRAFT_2013 0.86 -0.7
144,171 - B158DRAFT_2013 0.87 -0.9
144,184 + B158DRAFT_2013 0.88 +1.0
144,184 + B158DRAFT_2013 0.88 -0.6
144,184 + B158DRAFT_2013 0.88 -0.6
144,184 + B158DRAFT_2013 0.88 -0.9
144,184 + B158DRAFT_2013 0.88 -2.5
144,184 + B158DRAFT_2013 0.88 -0.9
144,184 + B158DRAFT_2013 0.88 -0.7
144,184 + B158DRAFT_2013 0.88 +0.0
144,184 + B158DRAFT_2013 0.88 -0.2
144,184 + B158DRAFT_2013 0.88 -0.8
144,184 + B158DRAFT_2013 0.88 -1.1
144,184 + B158DRAFT_2013 0.88 -0.5
144,184 + B158DRAFT_2013 0.88 -1.3
144,184 + B158DRAFT_2013 0.88 -0.1
144,184 + B158DRAFT_2013 0.88 -0.7
144,184 + B158DRAFT_2013 0.88 -0.4
144,184 + B158DRAFT_2013 0.88 -1.3
144,186 + B158DRAFT_2013 0.88 -0.8
144,186 + B158DRAFT_2013 0.88 -1.7
144,189 + B158DRAFT_2013 0.88 -1.5
144,192 - B158DRAFT_2013 0.88 -0.2
144,192 - B158DRAFT_2013 0.88 -2.5
144,192 - B158DRAFT_2013 0.88 -1.6
144,192 - B158DRAFT_2013 0.88 -1.0
144,192 - B158DRAFT_2013 0.88 +0.9
144,192 - B158DRAFT_2013 0.88 -0.8
144,192 - B158DRAFT_2013 0.88 -1.3
144,192 - B158DRAFT_2013 0.88 -1.2
144,192 - B158DRAFT_2013 0.88 -0.5
144,192 - B158DRAFT_2013 0.88 -0.4
144,192 - B158DRAFT_2013 0.88 -0.5
144,192 - B158DRAFT_2013 0.88 -2.0
144,192 - B158DRAFT_2013 0.88 -1.1
144,192 - B158DRAFT_2013 0.88 +0.3
144,192 - B158DRAFT_2013 0.88 -0.7
144,192 - B158DRAFT_2013 0.88 -1.5
144,192 - B158DRAFT_2013 0.88 +0.5
144,192 - B158DRAFT_2013 0.88 -0.3
144,192 - B158DRAFT_2013 0.88 -1.7
144,192 - B158DRAFT_2013 0.88 +0.9
144,197 - B158DRAFT_2013 0.89 +0.6
144,253 - -0.6
144,277 - -1.5
144,316 + -2.4
144,356 + -0.7
144,364 - B158DRAFT_2014 0.11 -0.5
144,364 - B158DRAFT_2014 0.11 +0.0
144,364 - B158DRAFT_2014 0.11 -0.2
144,458 - B158DRAFT_2014 0.34 -0.5
144,565 + B158DRAFT_2014 0.59 -2.0
144,573 + B158DRAFT_2014 0.61 -0.5
144,573 + B158DRAFT_2014 0.61 -0.8
144,579 - B158DRAFT_2014 0.63 -0.1
144,588 + B158DRAFT_2014 0.65 -0.2
144,588 + B158DRAFT_2014 0.65 -0.5
144,588 + B158DRAFT_2014 0.65 -0.1
144,588 + B158DRAFT_2014 0.65 -0.9
144,588 + B158DRAFT_2014 0.65 +0.3
144,588 + B158DRAFT_2014 0.65 +0.5
144,588 + B158DRAFT_2014 0.65 -0.1
144,588 + B158DRAFT_2014 0.65 -0.8
144,588 + B158DRAFT_2014 0.65 -0.3
144,588 + B158DRAFT_2014 0.65 +0.2
144,588 + B158DRAFT_2014 0.65 -0.3
144,588 + B158DRAFT_2014 0.65 -0.7
144,588 + B158DRAFT_2014 0.65 -0.6
144,588 + B158DRAFT_2014 0.65 +0.7
144,588 + B158DRAFT_2014 0.65 -0.3
144,588 + B158DRAFT_2014 0.65 -0.5
144,588 + B158DRAFT_2014 0.65 -0.8
144,588 + B158DRAFT_2014 0.65 -1.9
144,588 + B158DRAFT_2014 0.65 -1.1
144,588 + B158DRAFT_2014 0.65 +0.6
144,588 + B158DRAFT_2014 0.65 +0.1
144,588 + B158DRAFT_2014 0.65 -0.0
144,588 + B158DRAFT_2014 0.65 -0.1
144,596 - B158DRAFT_2014 0.67 -1.1
144,596 - B158DRAFT_2014 0.67 -0.3
144,596 - B158DRAFT_2014 0.67 -0.0
144,596 - B158DRAFT_2014 0.67 -0.2
144,596 - B158DRAFT_2014 0.67 -0.4
144,596 - B158DRAFT_2014 0.67 -0.5
144,596 - B158DRAFT_2014 0.67 -0.0
144,596 - B158DRAFT_2014 0.67 -0.2
144,596 - B158DRAFT_2014 0.67 -0.6
144,596 - B158DRAFT_2014 0.67 -0.4
144,596 - B158DRAFT_2014 0.67 +0.2
144,596 - B158DRAFT_2014 0.67 +0.4
144,596 - B158DRAFT_2014 0.67 -0.8
144,596 - B158DRAFT_2014 0.67 -0.2
144,596 - B158DRAFT_2014 0.67 +0.5
144,596 - B158DRAFT_2014 0.67 -0.5
144,596 - B158DRAFT_2014 0.67 -0.2
144,616 - B158DRAFT_2014 0.72 -0.7
144,665 + B158DRAFT_2014 0.84 -0.6
144,673 - B158DRAFT_2014 0.86 -0.3
144,698 - +0.0
144,698 - +0.5
144,820 + -0.7
144,831 + -0.2
144,831 + -0.3
144,839 - B158DRAFT_2015 0.11 +0.2
144,839 - B158DRAFT_2015 0.11 -0.8
144,841 + B158DRAFT_2015 0.11 -0.5
144,889 + B158DRAFT_2015 0.18 -0.3
144,900 + B158DRAFT_2015 0.19 +0.8
144,902 - B158DRAFT_2015 0.19 -0.0
144,927 - B158DRAFT_2015 0.23 +0.5
144,927 - B158DRAFT_2015 0.23 +0.0
144,927 - B158DRAFT_2015 0.23 +0.2
144,950 + B158DRAFT_2015 0.26 -0.4
144,956 - B158DRAFT_2015 0.27 -1.7
144,958 - B158DRAFT_2015 0.27 -1.2
144,966 + B158DRAFT_2015 0.28 -0.6
145,022 + B158DRAFT_2015 0.36 -0.0
145,022 + B158DRAFT_2015 0.36 -1.9
145,022 + B158DRAFT_2015 0.36 +0.1
145,030 - B158DRAFT_2015 0.37 -0.8
145,030 - B158DRAFT_2015 0.37 -0.3
145,030 - B158DRAFT_2015 0.37 -0.2
145,030 - B158DRAFT_2015 0.37 +0.3
145,030 - B158DRAFT_2015 0.37 -0.3
145,032 + B158DRAFT_2015 0.38 +0.8
145,040 - B158DRAFT_2015 0.39 -0.4
145,040 - B158DRAFT_2015 0.39 +0.5
145,040 - B158DRAFT_2015 0.39 +0.0
145,040 - B158DRAFT_2015 0.39 -0.3
145,040 - B158DRAFT_2015 0.39 -0.5
145,047 - B158DRAFT_2015 0.40 +1.5
145,064 + B158DRAFT_2015 0.42 -1.6
145,176 - B158DRAFT_2015 0.58 -0.4
145,179 - B158DRAFT_2015 0.58 -0.5
145,190 + B158DRAFT_2015 0.60 -1.2
145,190 + B158DRAFT_2015 0.60 -0.5
145,218 + B158DRAFT_2015 0.64 -0.5
145,250 - B158DRAFT_2015 0.68 -0.5
145,260 + B158DRAFT_2015 0.70 +0.4
145,284 + B158DRAFT_2015 0.73 -0.0
145,292 - B158DRAFT_2015 0.74 +0.3
145,298 - B158DRAFT_2015 0.75 +0.2

Or see this region's nucleotide sequence