Experiment: m.b. Tetracycline 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1922 and B158DRAFT_1923 are separated by 117 nucleotides B158DRAFT_1923 and B158DRAFT_1924 are separated by 93 nucleotides B158DRAFT_1924 and B158DRAFT_1925 are separated by 49 nucleotides
B158DRAFT_1922: B158DRAFT_1922 - Uncharacterized protein involved in outer membrane biogenesis, at 57,727 to 59,574
_1922
B158DRAFT_1923: B158DRAFT_1923 - hypothetical protein, at 59,692 to 60,450
_1923
B158DRAFT_1924: B158DRAFT_1924 - Methyltransferase domain., at 60,544 to 61,176
_1924
B158DRAFT_1925: B158DRAFT_1925 - ATPase components of ABC transporters with duplicated ATPase domains, at 61,226 to 63,136
_1925
Position (kb) 60
61
62 Strain fitness (log2 ratio) -1
0
1
2
3
4
5
6
7
8 at 59.573 kb on - strand at 59.630 kb on + strand at 59.638 kb on - strand at 59.638 kb on - strand at 59.783 kb on + strand, within B158DRAFT_1923 at 59.783 kb on + strand, within B158DRAFT_1923 at 59.783 kb on + strand, within B158DRAFT_1923 at 59.804 kb on + strand, within B158DRAFT_1923 at 60.002 kb on - strand, within B158DRAFT_1923 at 60.049 kb on - strand, within B158DRAFT_1923 at 60.149 kb on + strand, within B158DRAFT_1923 at 60.215 kb on - strand, within B158DRAFT_1923 at 60.224 kb on + strand, within B158DRAFT_1923 at 60.377 kb on + strand at 60.381 kb on + strand at 60.466 kb on + strand at 60.466 kb on + strand at 60.466 kb on + strand at 60.474 kb on - strand at 60.474 kb on - strand at 60.474 kb on - strand at 60.474 kb on - strand at 60.542 kb on + strand at 60.542 kb on + strand at 60.550 kb on - strand at 60.623 kb on - strand, within B158DRAFT_1924 at 60.721 kb on + strand, within B158DRAFT_1924 at 60.731 kb on + strand, within B158DRAFT_1924 at 60.739 kb on - strand, within B158DRAFT_1924 at 60.863 kb on - strand, within B158DRAFT_1924 at 60.912 kb on - strand, within B158DRAFT_1924 at 60.990 kb on - strand, within B158DRAFT_1924 at 61.018 kb on + strand, within B158DRAFT_1924 at 61.050 kb on + strand, within B158DRAFT_1924 at 61.109 kb on + strand, within B158DRAFT_1924 at 61.117 kb on - strand at 61.153 kb on - strand at 61.166 kb on + strand at 61.172 kb on - strand at 61.172 kb on - strand at 61.174 kb on - strand at 61.179 kb on - strand at 61.269 kb on + strand at 61.269 kb on + strand at 61.269 kb on + strand at 61.269 kb on + strand at 61.269 kb on + strand at 61.269 kb on + strand at 61.269 kb on + strand at 61.274 kb on + strand at 61.274 kb on + strand at 61.277 kb on - strand at 61.277 kb on - strand at 61.277 kb on - strand at 61.277 kb on - strand at 61.277 kb on - strand at 61.277 kb on - strand at 61.277 kb on - strand at 61.277 kb on - strand at 61.277 kb on - strand at 61.277 kb on - strand at 61.277 kb on - strand at 61.282 kb on - strand at 61.287 kb on - strand at 61.418 kb on + strand, within B158DRAFT_1925 at 61.438 kb on + strand, within B158DRAFT_1925 at 61.462 kb on + strand, within B158DRAFT_1925 at 61.502 kb on - strand, within B158DRAFT_1925 at 61.511 kb on + strand, within B158DRAFT_1925 at 61.519 kb on - strand, within B158DRAFT_1925 at 61.541 kb on - strand, within B158DRAFT_1925 at 61.573 kb on + strand, within B158DRAFT_1925 at 61.573 kb on + strand, within B158DRAFT_1925 at 61.573 kb on + strand, within B158DRAFT_1925 at 61.581 kb on - strand, within B158DRAFT_1925 at 61.581 kb on - strand, within B158DRAFT_1925 at 61.581 kb on - strand, within B158DRAFT_1925 at 61.581 kb on - strand, within B158DRAFT_1925 at 61.581 kb on - strand, within B158DRAFT_1925 at 61.611 kb on + strand, within B158DRAFT_1925 at 61.692 kb on - strand, within B158DRAFT_1925 at 61.692 kb on - strand, within B158DRAFT_1925 at 61.714 kb on - strand, within B158DRAFT_1925 at 61.720 kb on + strand, within B158DRAFT_1925 at 61.722 kb on - strand, within B158DRAFT_1925 at 61.817 kb on + strand, within B158DRAFT_1925 at 61.825 kb on - strand, within B158DRAFT_1925 at 61.949 kb on + strand, within B158DRAFT_1925 at 62.015 kb on + strand, within B158DRAFT_1925 at 62.037 kb on - strand, within B158DRAFT_1925 at 62.037 kb on - strand, within B158DRAFT_1925 at 62.074 kb on + strand, within B158DRAFT_1925 at 62.074 kb on + strand, within B158DRAFT_1925 at 62.082 kb on - strand, within B158DRAFT_1925 at 62.087 kb on + strand, within B158DRAFT_1925 at 62.106 kb on + strand, within B158DRAFT_1925 at 62.114 kb on - strand, within B158DRAFT_1925 at 62.114 kb on - strand, within B158DRAFT_1925
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.2 mg/ml remove 59,573 - -0.4 59,630 + -0.0 59,638 - +0.0 59,638 - -0.6 59,783 + B158DRAFT_1923 0.12 +7.9 59,783 + B158DRAFT_1923 0.12 +7.8 59,783 + B158DRAFT_1923 0.12 +8.4 59,804 + B158DRAFT_1923 0.15 +8.7 60,002 - B158DRAFT_1923 0.41 +6.0 60,049 - B158DRAFT_1923 0.47 +2.1 60,149 + B158DRAFT_1923 0.60 +6.5 60,215 - B158DRAFT_1923 0.69 +2.5 60,224 + B158DRAFT_1923 0.70 +5.1 60,377 + +5.0 60,381 + +5.6 60,466 + +2.1 60,466 + -0.3 60,466 + -0.2 60,474 - -0.8 60,474 - +0.2 60,474 - -0.2 60,474 - -0.1 60,542 + -1.7 60,542 + -0.4 60,550 - -0.2 60,623 - B158DRAFT_1924 0.12 -0.1 60,721 + B158DRAFT_1924 0.28 +0.2 60,731 + B158DRAFT_1924 0.30 -0.5 60,739 - B158DRAFT_1924 0.31 -1.3 60,863 - B158DRAFT_1924 0.50 +0.1 60,912 - B158DRAFT_1924 0.58 +0.7 60,990 - B158DRAFT_1924 0.70 -0.4 61,018 + B158DRAFT_1924 0.75 +0.1 61,050 + B158DRAFT_1924 0.80 -0.8 61,109 + B158DRAFT_1924 0.89 -0.3 61,117 - +0.9 61,153 - +1.4 61,166 + -0.3 61,172 - -0.7 61,172 - -0.1 61,174 - -0.1 61,179 - +0.7 61,269 + -0.1 61,269 + -0.5 61,269 + +0.2 61,269 + -0.3 61,269 + +0.4 61,269 + -0.8 61,269 + +0.2 61,274 + -0.2 61,274 + -0.1 61,277 - +0.8 61,277 - -1.0 61,277 - -0.2 61,277 - +0.4 61,277 - -0.5 61,277 - -0.5 61,277 - -0.5 61,277 - -0.0 61,277 - +1.1 61,277 - -0.0 61,277 - -0.2 61,282 - -0.3 61,287 - -0.2 61,418 + B158DRAFT_1925 0.10 -0.6 61,438 + B158DRAFT_1925 0.11 -0.6 61,462 + B158DRAFT_1925 0.12 -0.6 61,502 - B158DRAFT_1925 0.14 -1.3 61,511 + B158DRAFT_1925 0.15 -0.4 61,519 - B158DRAFT_1925 0.15 -0.1 61,541 - B158DRAFT_1925 0.16 +0.5 61,573 + B158DRAFT_1925 0.18 -0.3 61,573 + B158DRAFT_1925 0.18 -0.2 61,573 + B158DRAFT_1925 0.18 +1.3 61,581 - B158DRAFT_1925 0.19 -1.2 61,581 - B158DRAFT_1925 0.19 +0.3 61,581 - B158DRAFT_1925 0.19 -0.9 61,581 - B158DRAFT_1925 0.19 -0.4 61,581 - B158DRAFT_1925 0.19 +0.2 61,611 + B158DRAFT_1925 0.20 +0.3 61,692 - B158DRAFT_1925 0.24 -0.4 61,692 - B158DRAFT_1925 0.24 +0.3 61,714 - B158DRAFT_1925 0.26 -0.3 61,720 + B158DRAFT_1925 0.26 -0.3 61,722 - B158DRAFT_1925 0.26 +0.5 61,817 + B158DRAFT_1925 0.31 +0.6 61,825 - B158DRAFT_1925 0.31 -0.1 61,949 + B158DRAFT_1925 0.38 -0.8 62,015 + B158DRAFT_1925 0.41 -0.3 62,037 - B158DRAFT_1925 0.42 -1.6 62,037 - B158DRAFT_1925 0.42 -0.6 62,074 + B158DRAFT_1925 0.44 -0.3 62,074 + B158DRAFT_1925 0.44 -0.4 62,082 - B158DRAFT_1925 0.45 +0.1 62,087 + B158DRAFT_1925 0.45 -0.2 62,106 + B158DRAFT_1925 0.46 -0.0 62,114 - B158DRAFT_1925 0.46 -0.6 62,114 - B158DRAFT_1925 0.46 -0.4
Or see this region's nucleotide sequence