Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1101

Experiment: m.b. Tetracycline 0.2 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1099 and B158DRAFT_1100 are separated by 36 nucleotidesB158DRAFT_1100 and B158DRAFT_1101 are separated by 167 nucleotidesB158DRAFT_1101 and B158DRAFT_1102 are separated by 17 nucleotides B158DRAFT_1099: B158DRAFT_1099 - Putative NADP-dependent oxidoreductases, at 1,137,907 to 1,138,938 _1099 B158DRAFT_1100: B158DRAFT_1100 - Uncharacterized protein conserved in bacteria, at 1,138,975 to 1,139,362 _1100 B158DRAFT_1101: B158DRAFT_1101 - Imidazolonepropionase and related amidohydrolases, at 1,139,530 to 1,140,960 _1101 B158DRAFT_1102: B158DRAFT_1102 - hypothetical protein, at 1,140,978 to 1,141,652 _1102 Position (kb) 1139 1140 1141Strain fitness (log2 ratio) -1 0 1 2at 1138.544 kb on - strand, within B158DRAFT_1099at 1138.544 kb on - strand, within B158DRAFT_1099at 1138.549 kb on - strand, within B158DRAFT_1099at 1138.635 kb on + strand, within B158DRAFT_1099at 1138.653 kb on + strand, within B158DRAFT_1099at 1138.661 kb on - strand, within B158DRAFT_1099at 1138.661 kb on - strand, within B158DRAFT_1099at 1138.740 kb on - strand, within B158DRAFT_1099at 1138.767 kb on + strand, within B158DRAFT_1099at 1138.802 kb on + strand, within B158DRAFT_1099at 1138.846 kb on + strandat 1138.846 kb on + strandat 1138.846 kb on + strandat 1138.851 kb on + strandat 1138.851 kb on + strandat 1138.851 kb on + strandat 1138.851 kb on + strandat 1138.859 kb on - strandat 1138.859 kb on - strandat 1138.934 kb on + strandat 1138.934 kb on + strandat 1138.934 kb on + strandat 1138.942 kb on - strandat 1138.942 kb on - strandat 1138.942 kb on - strandat 1139.068 kb on + strand, within B158DRAFT_1100at 1139.197 kb on + strand, within B158DRAFT_1100at 1139.267 kb on + strand, within B158DRAFT_1100at 1139.300 kb on + strand, within B158DRAFT_1100at 1139.371 kb on - strandat 1139.391 kb on - strandat 1139.555 kb on + strandat 1139.795 kb on + strand, within B158DRAFT_1101at 1139.933 kb on + strand, within B158DRAFT_1101at 1139.933 kb on + strand, within B158DRAFT_1101at 1139.941 kb on - strand, within B158DRAFT_1101at 1139.959 kb on - strand, within B158DRAFT_1101at 1140.083 kb on - strand, within B158DRAFT_1101at 1140.123 kb on + strand, within B158DRAFT_1101at 1140.192 kb on + strand, within B158DRAFT_1101at 1140.230 kb on - strand, within B158DRAFT_1101at 1140.236 kb on - strand, within B158DRAFT_1101at 1140.269 kb on + strand, within B158DRAFT_1101at 1140.345 kb on + strand, within B158DRAFT_1101at 1140.362 kb on + strand, within B158DRAFT_1101at 1140.370 kb on - strand, within B158DRAFT_1101at 1140.381 kb on + strand, within B158DRAFT_1101at 1140.394 kb on + strand, within B158DRAFT_1101at 1140.394 kb on + strand, within B158DRAFT_1101at 1140.394 kb on + strand, within B158DRAFT_1101at 1140.394 kb on + strand, within B158DRAFT_1101at 1140.416 kb on + strand, within B158DRAFT_1101at 1140.563 kb on + strand, within B158DRAFT_1101at 1140.571 kb on - strand, within B158DRAFT_1101at 1140.572 kb on + strand, within B158DRAFT_1101at 1140.609 kb on + strand, within B158DRAFT_1101at 1140.640 kb on - strand, within B158DRAFT_1101at 1140.651 kb on + strand, within B158DRAFT_1101at 1140.654 kb on - strand, within B158DRAFT_1101at 1140.757 kb on - strand, within B158DRAFT_1101at 1140.944 kb on + strandat 1140.966 kb on - strandat 1140.969 kb on + strandat 1141.112 kb on - strand, within B158DRAFT_1102at 1141.180 kb on + strand, within B158DRAFT_1102at 1141.180 kb on + strand, within B158DRAFT_1102at 1141.220 kb on + strand, within B158DRAFT_1102at 1141.260 kb on + strand, within B158DRAFT_1102at 1141.423 kb on - strand, within B158DRAFT_1102at 1141.500 kb on + strand, within B158DRAFT_1102at 1141.510 kb on + strand, within B158DRAFT_1102at 1141.532 kb on + strand, within B158DRAFT_1102at 1141.532 kb on + strand, within B158DRAFT_1102at 1141.532 kb on + strand, within B158DRAFT_1102at 1141.540 kb on - strand, within B158DRAFT_1102at 1141.540 kb on - strand, within B158DRAFT_1102at 1141.540 kb on - strand, within B158DRAFT_1102at 1141.540 kb on - strand, within B158DRAFT_1102at 1141.540 kb on - strand, within B158DRAFT_1102at 1141.840 kb on + strandat 1141.848 kb on - strandat 1141.850 kb on + strandat 1141.899 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.2 mg/ml
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1,138,544 - B158DRAFT_1099 0.62 -0.3
1,138,544 - B158DRAFT_1099 0.62 -0.3
1,138,549 - B158DRAFT_1099 0.62 -1.5
1,138,635 + B158DRAFT_1099 0.71 -0.2
1,138,653 + B158DRAFT_1099 0.72 +0.4
1,138,661 - B158DRAFT_1099 0.73 -0.4
1,138,661 - B158DRAFT_1099 0.73 -0.2
1,138,740 - B158DRAFT_1099 0.81 -0.3
1,138,767 + B158DRAFT_1099 0.83 +0.5
1,138,802 + B158DRAFT_1099 0.87 -1.0
1,138,846 + -0.1
1,138,846 + +1.2
1,138,846 + -0.3
1,138,851 + +0.1
1,138,851 + +0.5
1,138,851 + -0.3
1,138,851 + +0.3
1,138,859 - +0.4
1,138,859 - +1.1
1,138,934 + -0.1
1,138,934 + +0.3
1,138,934 + +0.2
1,138,942 - -0.2
1,138,942 - -0.4
1,138,942 - -0.2
1,139,068 + B158DRAFT_1100 0.24 -0.4
1,139,197 + B158DRAFT_1100 0.57 +0.3
1,139,267 + B158DRAFT_1100 0.75 -0.2
1,139,300 + B158DRAFT_1100 0.84 +0.2
1,139,371 - -0.4
1,139,391 - -0.7
1,139,555 + +2.0
1,139,795 + B158DRAFT_1101 0.19 +0.1
1,139,933 + B158DRAFT_1101 0.28 +0.2
1,139,933 + B158DRAFT_1101 0.28 +0.1
1,139,941 - B158DRAFT_1101 0.29 +0.9
1,139,959 - B158DRAFT_1101 0.30 -0.8
1,140,083 - B158DRAFT_1101 0.39 -0.3
1,140,123 + B158DRAFT_1101 0.41 -0.2
1,140,192 + B158DRAFT_1101 0.46 +0.3
1,140,230 - B158DRAFT_1101 0.49 +0.3
1,140,236 - B158DRAFT_1101 0.49 -0.1
1,140,269 + B158DRAFT_1101 0.52 +0.0
1,140,345 + B158DRAFT_1101 0.57 +0.2
1,140,362 + B158DRAFT_1101 0.58 +0.0
1,140,370 - B158DRAFT_1101 0.59 +0.3
1,140,381 + B158DRAFT_1101 0.59 -0.1
1,140,394 + B158DRAFT_1101 0.60 +0.3
1,140,394 + B158DRAFT_1101 0.60 +0.4
1,140,394 + B158DRAFT_1101 0.60 -0.2
1,140,394 + B158DRAFT_1101 0.60 +0.9
1,140,416 + B158DRAFT_1101 0.62 +0.3
1,140,563 + B158DRAFT_1101 0.72 +0.2
1,140,571 - B158DRAFT_1101 0.73 -1.1
1,140,572 + B158DRAFT_1101 0.73 -0.1
1,140,609 + B158DRAFT_1101 0.75 -0.6
1,140,640 - B158DRAFT_1101 0.78 +0.1
1,140,651 + B158DRAFT_1101 0.78 -0.4
1,140,654 - B158DRAFT_1101 0.79 -0.3
1,140,757 - B158DRAFT_1101 0.86 +1.1
1,140,944 + +0.0
1,140,966 - -0.5
1,140,969 + -0.3
1,141,112 - B158DRAFT_1102 0.20 -0.3
1,141,180 + B158DRAFT_1102 0.30 +0.3
1,141,180 + B158DRAFT_1102 0.30 -1.0
1,141,220 + B158DRAFT_1102 0.36 -0.5
1,141,260 + B158DRAFT_1102 0.42 -0.3
1,141,423 - B158DRAFT_1102 0.66 -0.6
1,141,500 + B158DRAFT_1102 0.77 -0.7
1,141,510 + B158DRAFT_1102 0.79 -1.1
1,141,532 + B158DRAFT_1102 0.82 +0.2
1,141,532 + B158DRAFT_1102 0.82 -0.4
1,141,532 + B158DRAFT_1102 0.82 -0.2
1,141,540 - B158DRAFT_1102 0.83 +0.1
1,141,540 - B158DRAFT_1102 0.83 -1.1
1,141,540 - B158DRAFT_1102 0.83 -1.4
1,141,540 - B158DRAFT_1102 0.83 -0.0
1,141,540 - B158DRAFT_1102 0.83 -0.2
1,141,840 + -0.1
1,141,848 - -0.2
1,141,850 + +0.1
1,141,899 + +0.1

Or see this region's nucleotide sequence