Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0985

Experiment: m.b. Tetracycline 0.2 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0984 and B158DRAFT_0985 are separated by 27 nucleotidesB158DRAFT_0985 and B158DRAFT_0986 are separated by 572 nucleotides B158DRAFT_0984: B158DRAFT_0984 - lysine-2,3-aminomutase-related protein, at 1,018,605 to 1,019,636 _0984 B158DRAFT_0985: B158DRAFT_0985 - translation elongation factor P, at 1,019,664 to 1,020,227 _0985 B158DRAFT_0986: B158DRAFT_0986 - EF-P lysine aminoacylase GenX, at 1,020,800 to 1,021,750 _0986 Position (kb) 1019 1020 1021Strain fitness (log2 ratio) -1 0 1 2 3 4 5at 1018.788 kb on + strand, within B158DRAFT_0984at 1018.881 kb on + strand, within B158DRAFT_0984at 1018.897 kb on + strand, within B158DRAFT_0984at 1018.956 kb on + strand, within B158DRAFT_0984at 1018.956 kb on + strand, within B158DRAFT_0984at 1018.956 kb on + strand, within B158DRAFT_0984at 1018.964 kb on - strand, within B158DRAFT_0984at 1018.977 kb on + strand, within B158DRAFT_0984at 1018.977 kb on + strand, within B158DRAFT_0984at 1018.977 kb on + strand, within B158DRAFT_0984at 1018.977 kb on + strand, within B158DRAFT_0984at 1018.982 kb on + strand, within B158DRAFT_0984at 1018.985 kb on - strand, within B158DRAFT_0984at 1018.985 kb on - strand, within B158DRAFT_0984at 1018.990 kb on - strand, within B158DRAFT_0984at 1019.001 kb on + strand, within B158DRAFT_0984at 1019.004 kb on - strand, within B158DRAFT_0984at 1019.006 kb on + strand, within B158DRAFT_0984at 1019.009 kb on - strand, within B158DRAFT_0984at 1019.020 kb on + strand, within B158DRAFT_0984at 1019.069 kb on + strand, within B158DRAFT_0984at 1019.071 kb on + strand, within B158DRAFT_0984at 1019.127 kb on - strand, within B158DRAFT_0984at 1019.217 kb on - strand, within B158DRAFT_0984at 1019.393 kb on - strand, within B158DRAFT_0984at 1019.512 kb on + strand, within B158DRAFT_0984at 1019.512 kb on + strand, within B158DRAFT_0984at 1019.520 kb on - strand, within B158DRAFT_0984at 1019.520 kb on - strand, within B158DRAFT_0984at 1019.734 kb on - strand, within B158DRAFT_0985at 1019.774 kb on - strand, within B158DRAFT_0985at 1019.790 kb on + strand, within B158DRAFT_0985at 1019.790 kb on + strand, within B158DRAFT_0985at 1019.838 kb on + strand, within B158DRAFT_0985at 1019.927 kb on - strand, within B158DRAFT_0985at 1019.937 kb on - strand, within B158DRAFT_0985at 1020.042 kb on + strand, within B158DRAFT_0985at 1020.042 kb on + strand, within B158DRAFT_0985at 1020.042 kb on + strand, within B158DRAFT_0985at 1020.042 kb on + strand, within B158DRAFT_0985at 1020.050 kb on - strand, within B158DRAFT_0985at 1020.050 kb on - strand, within B158DRAFT_0985at 1020.087 kb on - strand, within B158DRAFT_0985at 1020.111 kb on + strand, within B158DRAFT_0985at 1020.112 kb on + strand, within B158DRAFT_0985at 1020.127 kb on - strand, within B158DRAFT_0985at 1020.221 kb on + strandat 1020.245 kb on + strandat 1020.248 kb on - strandat 1020.285 kb on + strandat 1020.285 kb on + strandat 1020.285 kb on + strandat 1020.339 kb on - strandat 1020.346 kb on + strandat 1020.354 kb on - strandat 1020.773 kb on + strandat 1020.796 kb on + strandat 1020.796 kb on + strandat 1020.804 kb on - strandat 1020.804 kb on - strandat 1020.804 kb on - strandat 1020.804 kb on - strandat 1020.804 kb on - strandat 1020.843 kb on - strandat 1020.843 kb on - strandat 1020.893 kb on - strandat 1020.909 kb on - strand, within B158DRAFT_0986at 1020.967 kb on + strand, within B158DRAFT_0986at 1020.967 kb on + strand, within B158DRAFT_0986at 1020.967 kb on + strand, within B158DRAFT_0986at 1020.967 kb on + strand, within B158DRAFT_0986at 1020.967 kb on + strand, within B158DRAFT_0986at 1020.968 kb on - strand, within B158DRAFT_0986at 1020.968 kb on - strand, within B158DRAFT_0986at 1020.972 kb on + strand, within B158DRAFT_0986at 1020.972 kb on + strand, within B158DRAFT_0986at 1020.972 kb on + strand, within B158DRAFT_0986at 1020.972 kb on + strand, within B158DRAFT_0986at 1020.972 kb on + strand, within B158DRAFT_0986at 1020.972 kb on + strand, within B158DRAFT_0986at 1020.972 kb on + strand, within B158DRAFT_0986at 1020.972 kb on + strand, within B158DRAFT_0986at 1020.972 kb on + strand, within B158DRAFT_0986at 1020.972 kb on + strand, within B158DRAFT_0986at 1020.972 kb on + strand, within B158DRAFT_0986at 1020.975 kb on - strand, within B158DRAFT_0986at 1020.975 kb on - strand, within B158DRAFT_0986at 1020.975 kb on - strand, within B158DRAFT_0986at 1020.980 kb on - strand, within B158DRAFT_0986at 1020.980 kb on - strand, within B158DRAFT_0986at 1020.980 kb on - strand, within B158DRAFT_0986at 1020.982 kb on + strand, within B158DRAFT_0986at 1020.990 kb on - strand, within B158DRAFT_0986at 1021.079 kb on + strand, within B158DRAFT_0986at 1021.092 kb on - strand, within B158DRAFT_0986at 1021.104 kb on - strand, within B158DRAFT_0986at 1021.153 kb on + strand, within B158DRAFT_0986at 1021.160 kb on + strand, within B158DRAFT_0986

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.2 mg/ml
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1,018,788 + B158DRAFT_0984 0.18 +1.3
1,018,881 + B158DRAFT_0984 0.27 -1.7
1,018,897 + B158DRAFT_0984 0.28 +0.6
1,018,956 + B158DRAFT_0984 0.34 +0.0
1,018,956 + B158DRAFT_0984 0.34 -0.2
1,018,956 + B158DRAFT_0984 0.34 +0.8
1,018,964 - B158DRAFT_0984 0.35 +0.4
1,018,977 + B158DRAFT_0984 0.36 -0.1
1,018,977 + B158DRAFT_0984 0.36 +1.0
1,018,977 + B158DRAFT_0984 0.36 +0.5
1,018,977 + B158DRAFT_0984 0.36 +0.0
1,018,982 + B158DRAFT_0984 0.37 -0.6
1,018,985 - B158DRAFT_0984 0.37 -0.3
1,018,985 - B158DRAFT_0984 0.37 +0.1
1,018,990 - B158DRAFT_0984 0.37 +0.6
1,019,001 + B158DRAFT_0984 0.38 +0.0
1,019,004 - B158DRAFT_0984 0.39 -0.1
1,019,006 + B158DRAFT_0984 0.39 -0.8
1,019,009 - B158DRAFT_0984 0.39 -0.7
1,019,020 + B158DRAFT_0984 0.40 +0.1
1,019,069 + B158DRAFT_0984 0.45 -0.8
1,019,071 + B158DRAFT_0984 0.45 +0.6
1,019,127 - B158DRAFT_0984 0.51 +1.8
1,019,217 - B158DRAFT_0984 0.59 -0.3
1,019,393 - B158DRAFT_0984 0.76 +0.8
1,019,512 + B158DRAFT_0984 0.88 +0.1
1,019,512 + B158DRAFT_0984 0.88 +0.2
1,019,520 - B158DRAFT_0984 0.89 -0.5
1,019,520 - B158DRAFT_0984 0.89 -0.3
1,019,734 - B158DRAFT_0985 0.12 +3.8
1,019,774 - B158DRAFT_0985 0.20 +3.0
1,019,790 + B158DRAFT_0985 0.22 +3.2
1,019,790 + B158DRAFT_0985 0.22 +4.4
1,019,838 + B158DRAFT_0985 0.31 +3.3
1,019,927 - B158DRAFT_0985 0.47 +3.3
1,019,937 - B158DRAFT_0985 0.48 +3.8
1,020,042 + B158DRAFT_0985 0.67 +2.5
1,020,042 + B158DRAFT_0985 0.67 +4.5
1,020,042 + B158DRAFT_0985 0.67 +5.0
1,020,042 + B158DRAFT_0985 0.67 +4.2
1,020,050 - B158DRAFT_0985 0.68 +2.2
1,020,050 - B158DRAFT_0985 0.68 +4.0
1,020,087 - B158DRAFT_0985 0.75 +3.6
1,020,111 + B158DRAFT_0985 0.79 +2.5
1,020,112 + B158DRAFT_0985 0.79 +1.9
1,020,127 - B158DRAFT_0985 0.82 +4.0
1,020,221 + -0.6
1,020,245 + -0.8
1,020,248 - +0.1
1,020,285 + -0.4
1,020,285 + +0.7
1,020,285 + -0.5
1,020,339 - +0.3
1,020,346 + -0.1
1,020,354 - +0.0
1,020,773 + -0.3
1,020,796 + -0.7
1,020,796 + -0.5
1,020,804 - -0.4
1,020,804 - +0.2
1,020,804 - +1.5
1,020,804 - -0.1
1,020,804 - +0.2
1,020,843 - -0.0
1,020,843 - +0.0
1,020,893 - -0.8
1,020,909 - B158DRAFT_0986 0.11 -0.7
1,020,967 + B158DRAFT_0986 0.18 +1.5
1,020,967 + B158DRAFT_0986 0.18 +0.2
1,020,967 + B158DRAFT_0986 0.18 +1.0
1,020,967 + B158DRAFT_0986 0.18 +0.1
1,020,967 + B158DRAFT_0986 0.18 -0.3
1,020,968 - B158DRAFT_0986 0.18 +0.1
1,020,968 - B158DRAFT_0986 0.18 +3.1
1,020,972 + B158DRAFT_0986 0.18 +0.1
1,020,972 + B158DRAFT_0986 0.18 +0.3
1,020,972 + B158DRAFT_0986 0.18 +0.2
1,020,972 + B158DRAFT_0986 0.18 -0.3
1,020,972 + B158DRAFT_0986 0.18 -0.2
1,020,972 + B158DRAFT_0986 0.18 -0.8
1,020,972 + B158DRAFT_0986 0.18 +3.2
1,020,972 + B158DRAFT_0986 0.18 +0.1
1,020,972 + B158DRAFT_0986 0.18 +0.5
1,020,972 + B158DRAFT_0986 0.18 +0.5
1,020,972 + B158DRAFT_0986 0.18 +0.2
1,020,975 - B158DRAFT_0986 0.18 -0.8
1,020,975 - B158DRAFT_0986 0.18 +0.1
1,020,975 - B158DRAFT_0986 0.18 -0.2
1,020,980 - B158DRAFT_0986 0.19 +0.1
1,020,980 - B158DRAFT_0986 0.19 +0.3
1,020,980 - B158DRAFT_0986 0.19 +0.4
1,020,982 + B158DRAFT_0986 0.19 +0.4
1,020,990 - B158DRAFT_0986 0.20 -0.1
1,021,079 + B158DRAFT_0986 0.29 +0.5
1,021,092 - B158DRAFT_0986 0.31 +0.6
1,021,104 - B158DRAFT_0986 0.32 +0.6
1,021,153 + B158DRAFT_0986 0.37 -1.0
1,021,160 + B158DRAFT_0986 0.38 +0.3

Or see this region's nucleotide sequence