Experiment: m.b. Tetracycline 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0799 and B158DRAFT_0800 are separated by 35 nucleotides B158DRAFT_0800 and B158DRAFT_0801 are separated by 74 nucleotides B158DRAFT_0801 and B158DRAFT_0802 are separated by 132 nucleotides
B158DRAFT_0799: B158DRAFT_0799 - aconitate hydratase 1, at 803,154 to 805,859
_0799
B158DRAFT_0800: B158DRAFT_0800 - Major Facilitator Superfamily., at 805,895 to 807,262
_0800
B158DRAFT_0801: B158DRAFT_0801 - hypothetical protein, at 807,337 to 807,759
_0801
B158DRAFT_0802: B158DRAFT_0802 - Arabinose efflux permease, at 807,892 to 809,091
_0802
Position (kb) 805
806
807
808 Strain fitness (log2 ratio) -2
-1
0
1
2 at 804.969 kb on + strand, within B158DRAFT_0799 at 804.969 kb on + strand, within B158DRAFT_0799 at 804.979 kb on - strand, within B158DRAFT_0799 at 805.036 kb on + strand, within B158DRAFT_0799 at 805.044 kb on - strand, within B158DRAFT_0799 at 805.106 kb on - strand, within B158DRAFT_0799 at 805.164 kb on + strand, within B158DRAFT_0799 at 805.248 kb on - strand, within B158DRAFT_0799 at 805.253 kb on + strand, within B158DRAFT_0799 at 805.253 kb on + strand, within B158DRAFT_0799 at 805.253 kb on + strand, within B158DRAFT_0799 at 805.261 kb on - strand, within B158DRAFT_0799 at 805.277 kb on + strand, within B158DRAFT_0799 at 805.285 kb on - strand, within B158DRAFT_0799 at 805.285 kb on - strand, within B158DRAFT_0799 at 805.285 kb on - strand, within B158DRAFT_0799 at 805.296 kb on + strand, within B158DRAFT_0799 at 805.320 kb on - strand, within B158DRAFT_0799 at 805.325 kb on + strand, within B158DRAFT_0799 at 805.408 kb on - strand, within B158DRAFT_0799 at 805.455 kb on - strand, within B158DRAFT_0799 at 805.463 kb on - strand, within B158DRAFT_0799 at 805.564 kb on + strand, within B158DRAFT_0799 at 805.564 kb on + strand, within B158DRAFT_0799 at 805.599 kb on - strand at 805.613 kb on + strand at 805.651 kb on - strand at 805.776 kb on - strand at 805.853 kb on + strand at 805.971 kb on + strand at 805.971 kb on + strand at 805.979 kb on - strand at 806.047 kb on - strand, within B158DRAFT_0800 at 806.102 kb on - strand, within B158DRAFT_0800 at 806.222 kb on + strand, within B158DRAFT_0800 at 806.242 kb on + strand, within B158DRAFT_0800 at 806.259 kb on + strand, within B158DRAFT_0800 at 806.336 kb on + strand, within B158DRAFT_0800 at 806.336 kb on + strand, within B158DRAFT_0800 at 806.336 kb on + strand, within B158DRAFT_0800 at 806.336 kb on + strand, within B158DRAFT_0800 at 806.355 kb on + strand, within B158DRAFT_0800 at 806.355 kb on + strand, within B158DRAFT_0800 at 806.363 kb on + strand, within B158DRAFT_0800 at 806.374 kb on + strand, within B158DRAFT_0800 at 806.382 kb on - strand, within B158DRAFT_0800 at 806.387 kb on - strand, within B158DRAFT_0800 at 806.439 kb on + strand, within B158DRAFT_0800 at 806.439 kb on + strand, within B158DRAFT_0800 at 806.444 kb on + strand, within B158DRAFT_0800 at 806.447 kb on - strand, within B158DRAFT_0800 at 806.447 kb on - strand, within B158DRAFT_0800 at 806.558 kb on + strand, within B158DRAFT_0800 at 806.626 kb on - strand, within B158DRAFT_0800 at 806.665 kb on + strand, within B158DRAFT_0800 at 806.673 kb on - strand, within B158DRAFT_0800 at 806.731 kb on - strand, within B158DRAFT_0800 at 806.778 kb on + strand, within B158DRAFT_0800 at 806.786 kb on - strand, within B158DRAFT_0800 at 806.786 kb on - strand, within B158DRAFT_0800 at 806.814 kb on + strand, within B158DRAFT_0800 at 806.814 kb on + strand, within B158DRAFT_0800 at 806.815 kb on + strand, within B158DRAFT_0800 at 806.840 kb on + strand, within B158DRAFT_0800 at 806.840 kb on + strand, within B158DRAFT_0800 at 806.840 kb on + strand, within B158DRAFT_0800 at 806.848 kb on - strand, within B158DRAFT_0800 at 806.868 kb on - strand, within B158DRAFT_0800 at 806.903 kb on + strand, within B158DRAFT_0800 at 806.911 kb on - strand, within B158DRAFT_0800 at 806.949 kb on - strand, within B158DRAFT_0800 at 806.988 kb on - strand, within B158DRAFT_0800 at 806.998 kb on - strand, within B158DRAFT_0800 at 807.033 kb on + strand, within B158DRAFT_0800 at 807.033 kb on + strand, within B158DRAFT_0800 at 807.041 kb on - strand, within B158DRAFT_0800 at 807.041 kb on - strand, within B158DRAFT_0800 at 807.041 kb on - strand, within B158DRAFT_0800 at 807.082 kb on + strand, within B158DRAFT_0800 at 807.082 kb on + strand, within B158DRAFT_0800 at 807.090 kb on - strand, within B158DRAFT_0800 at 807.093 kb on + strand, within B158DRAFT_0800 at 807.100 kb on - strand, within B158DRAFT_0800 at 807.100 kb on - strand, within B158DRAFT_0800 at 807.114 kb on - strand, within B158DRAFT_0800 at 807.114 kb on - strand, within B158DRAFT_0800 at 807.200 kb on + strand at 807.208 kb on - strand at 807.233 kb on - strand at 807.233 kb on - strand at 807.237 kb on + strand at 807.238 kb on - strand at 807.265 kb on - strand at 807.461 kb on - strand, within B158DRAFT_0801 at 807.477 kb on + strand, within B158DRAFT_0801 at 807.477 kb on + strand, within B158DRAFT_0801 at 807.477 kb on + strand, within B158DRAFT_0801 at 807.477 kb on + strand, within B158DRAFT_0801 at 807.477 kb on + strand, within B158DRAFT_0801 at 807.485 kb on - strand, within B158DRAFT_0801 at 807.485 kb on - strand, within B158DRAFT_0801 at 807.485 kb on - strand, within B158DRAFT_0801 at 807.492 kb on + strand, within B158DRAFT_0801 at 807.492 kb on + strand, within B158DRAFT_0801 at 807.492 kb on + strand, within B158DRAFT_0801 at 807.492 kb on + strand, within B158DRAFT_0801 at 807.500 kb on - strand, within B158DRAFT_0801 at 807.500 kb on - strand, within B158DRAFT_0801 at 807.500 kb on - strand, within B158DRAFT_0801 at 807.500 kb on - strand, within B158DRAFT_0801 at 807.500 kb on - strand, within B158DRAFT_0801 at 807.500 kb on - strand, within B158DRAFT_0801 at 807.502 kb on - strand, within B158DRAFT_0801 at 807.535 kb on + strand, within B158DRAFT_0801 at 807.535 kb on + strand, within B158DRAFT_0801 at 807.535 kb on + strand, within B158DRAFT_0801 at 807.535 kb on + strand, within B158DRAFT_0801 at 807.543 kb on - strand, within B158DRAFT_0801 at 807.543 kb on - strand, within B158DRAFT_0801 at 807.543 kb on - strand, within B158DRAFT_0801 at 807.543 kb on - strand, within B158DRAFT_0801 at 807.616 kb on - strand, within B158DRAFT_0801 at 807.618 kb on + strand, within B158DRAFT_0801 at 807.626 kb on - strand, within B158DRAFT_0801 at 807.688 kb on + strand, within B158DRAFT_0801 at 807.688 kb on + strand, within B158DRAFT_0801 at 807.688 kb on + strand, within B158DRAFT_0801 at 807.746 kb on - strand at 807.820 kb on + strand at 807.828 kb on - strand at 807.867 kb on + strand at 807.883 kb on - strand at 808.047 kb on + strand, within B158DRAFT_0802 at 808.050 kb on - strand, within B158DRAFT_0802 at 808.055 kb on - strand, within B158DRAFT_0802 at 808.055 kb on - strand, within B158DRAFT_0802 at 808.081 kb on + strand, within B158DRAFT_0802 at 808.089 kb on - strand, within B158DRAFT_0802 at 808.156 kb on + strand, within B158DRAFT_0802 at 808.156 kb on + strand, within B158DRAFT_0802 at 808.174 kb on - strand, within B158DRAFT_0802
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.2 mg/ml remove 804,969 + B158DRAFT_0799 0.67 +0.1 804,969 + B158DRAFT_0799 0.67 -0.3 804,979 - B158DRAFT_0799 0.67 -0.3 805,036 + B158DRAFT_0799 0.70 -0.0 805,044 - B158DRAFT_0799 0.70 -0.3 805,106 - B158DRAFT_0799 0.72 +0.2 805,164 + B158DRAFT_0799 0.74 +0.3 805,248 - B158DRAFT_0799 0.77 -0.5 805,253 + B158DRAFT_0799 0.78 +0.7 805,253 + B158DRAFT_0799 0.78 -0.6 805,253 + B158DRAFT_0799 0.78 +0.1 805,261 - B158DRAFT_0799 0.78 -1.1 805,277 + B158DRAFT_0799 0.78 -0.9 805,285 - B158DRAFT_0799 0.79 +0.5 805,285 - B158DRAFT_0799 0.79 -0.2 805,285 - B158DRAFT_0799 0.79 -0.5 805,296 + B158DRAFT_0799 0.79 +2.1 805,320 - B158DRAFT_0799 0.80 -0.1 805,325 + B158DRAFT_0799 0.80 -0.6 805,408 - B158DRAFT_0799 0.83 -0.9 805,455 - B158DRAFT_0799 0.85 +0.2 805,463 - B158DRAFT_0799 0.85 +0.1 805,564 + B158DRAFT_0799 0.89 -2.1 805,564 + B158DRAFT_0799 0.89 +0.0 805,599 - +0.4 805,613 + +0.1 805,651 - +0.7 805,776 - -0.1 805,853 + -0.5 805,971 + +0.5 805,971 + -1.3 805,979 - -0.3 806,047 - B158DRAFT_0800 0.11 -0.1 806,102 - B158DRAFT_0800 0.15 +0.8 806,222 + B158DRAFT_0800 0.24 +0.3 806,242 + B158DRAFT_0800 0.25 -0.2 806,259 + B158DRAFT_0800 0.27 -0.2 806,336 + B158DRAFT_0800 0.32 +0.6 806,336 + B158DRAFT_0800 0.32 +1.7 806,336 + B158DRAFT_0800 0.32 +0.3 806,336 + B158DRAFT_0800 0.32 -0.3 806,355 + B158DRAFT_0800 0.34 +0.1 806,355 + B158DRAFT_0800 0.34 -0.5 806,363 + B158DRAFT_0800 0.34 +0.2 806,374 + B158DRAFT_0800 0.35 +0.3 806,382 - B158DRAFT_0800 0.36 -0.6 806,387 - B158DRAFT_0800 0.36 +1.3 806,439 + B158DRAFT_0800 0.40 -0.1 806,439 + B158DRAFT_0800 0.40 -0.3 806,444 + B158DRAFT_0800 0.40 -0.3 806,447 - B158DRAFT_0800 0.40 -1.4 806,447 - B158DRAFT_0800 0.40 -0.7 806,558 + B158DRAFT_0800 0.48 -0.3 806,626 - B158DRAFT_0800 0.53 +0.2 806,665 + B158DRAFT_0800 0.56 -0.0 806,673 - B158DRAFT_0800 0.57 -0.7 806,731 - B158DRAFT_0800 0.61 -0.2 806,778 + B158DRAFT_0800 0.65 +0.6 806,786 - B158DRAFT_0800 0.65 -0.5 806,786 - B158DRAFT_0800 0.65 -1.1 806,814 + B158DRAFT_0800 0.67 +0.0 806,814 + B158DRAFT_0800 0.67 -0.2 806,815 + B158DRAFT_0800 0.67 -0.0 806,840 + B158DRAFT_0800 0.69 -0.9 806,840 + B158DRAFT_0800 0.69 +0.5 806,840 + B158DRAFT_0800 0.69 -1.7 806,848 - B158DRAFT_0800 0.70 +0.2 806,868 - B158DRAFT_0800 0.71 -0.1 806,903 + B158DRAFT_0800 0.74 -0.3 806,911 - B158DRAFT_0800 0.74 -0.5 806,949 - B158DRAFT_0800 0.77 -0.0 806,988 - B158DRAFT_0800 0.80 -0.3 806,998 - B158DRAFT_0800 0.81 -0.3 807,033 + B158DRAFT_0800 0.83 -0.0 807,033 + B158DRAFT_0800 0.83 +0.0 807,041 - B158DRAFT_0800 0.84 -0.2 807,041 - B158DRAFT_0800 0.84 -0.4 807,041 - B158DRAFT_0800 0.84 -0.6 807,082 + B158DRAFT_0800 0.87 +0.4 807,082 + B158DRAFT_0800 0.87 +0.2 807,090 - B158DRAFT_0800 0.87 -0.9 807,093 + B158DRAFT_0800 0.88 -0.2 807,100 - B158DRAFT_0800 0.88 -0.0 807,100 - B158DRAFT_0800 0.88 -0.5 807,114 - B158DRAFT_0800 0.89 -1.8 807,114 - B158DRAFT_0800 0.89 -1.2 807,200 + -0.9 807,208 - -0.4 807,233 - -0.9 807,233 - -0.5 807,237 + -1.1 807,238 - +0.7 807,265 - -0.4 807,461 - B158DRAFT_0801 0.29 +0.0 807,477 + B158DRAFT_0801 0.33 -0.2 807,477 + B158DRAFT_0801 0.33 -0.6 807,477 + B158DRAFT_0801 0.33 -1.3 807,477 + B158DRAFT_0801 0.33 -0.4 807,477 + B158DRAFT_0801 0.33 +0.3 807,485 - B158DRAFT_0801 0.35 -0.7 807,485 - B158DRAFT_0801 0.35 -0.1 807,485 - B158DRAFT_0801 0.35 +0.0 807,492 + B158DRAFT_0801 0.37 -0.8 807,492 + B158DRAFT_0801 0.37 +1.8 807,492 + B158DRAFT_0801 0.37 +0.2 807,492 + B158DRAFT_0801 0.37 -0.5 807,500 - B158DRAFT_0801 0.39 -1.0 807,500 - B158DRAFT_0801 0.39 -0.1 807,500 - B158DRAFT_0801 0.39 -0.3 807,500 - B158DRAFT_0801 0.39 +0.2 807,500 - B158DRAFT_0801 0.39 -1.2 807,500 - B158DRAFT_0801 0.39 -1.0 807,502 - B158DRAFT_0801 0.39 +1.3 807,535 + B158DRAFT_0801 0.47 +0.5 807,535 + B158DRAFT_0801 0.47 -0.3 807,535 + B158DRAFT_0801 0.47 -0.3 807,535 + B158DRAFT_0801 0.47 -0.8 807,543 - B158DRAFT_0801 0.49 -0.1 807,543 - B158DRAFT_0801 0.49 -0.2 807,543 - B158DRAFT_0801 0.49 -0.4 807,543 - B158DRAFT_0801 0.49 +0.6 807,616 - B158DRAFT_0801 0.66 -0.1 807,618 + B158DRAFT_0801 0.66 +0.1 807,626 - B158DRAFT_0801 0.68 +0.8 807,688 + B158DRAFT_0801 0.83 +0.4 807,688 + B158DRAFT_0801 0.83 -0.5 807,688 + B158DRAFT_0801 0.83 +0.9 807,746 - +0.4 807,820 + -0.2 807,828 - -0.4 807,867 + +0.3 807,883 - +2.7 808,047 + B158DRAFT_0802 0.13 -0.9 808,050 - B158DRAFT_0802 0.13 -0.2 808,055 - B158DRAFT_0802 0.14 -0.0 808,055 - B158DRAFT_0802 0.14 +0.5 808,081 + B158DRAFT_0802 0.16 -0.0 808,089 - B158DRAFT_0802 0.16 -0.7 808,156 + B158DRAFT_0802 0.22 +0.5 808,156 + B158DRAFT_0802 0.22 +0.0 808,174 - B158DRAFT_0802 0.23 -0.5
Or see this region's nucleotide sequence