Experiment: m.b. Tetracycline 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0633 and B158DRAFT_0634 are separated by 59 nucleotides B158DRAFT_0634 and B158DRAFT_0635 are separated by 147 nucleotides B158DRAFT_0635 and B158DRAFT_0636 are separated by 51 nucleotides B158DRAFT_0636 and B158DRAFT_0637 are separated by 23 nucleotides
B158DRAFT_0633: B158DRAFT_0633 - putative RNA-binding protein, YhbY family, at 641,703 to 642,032
_0633
B158DRAFT_0634: B158DRAFT_0634 - 23S rRNA Um-2552 2'-O-methyltransferase (EC 2.1.1.166), at 642,092 to 642,712
_0634
B158DRAFT_0635: B158DRAFT_0635 - ATP-dependent metalloprotease FtsH, at 642,860 to 644,785
_0635
B158DRAFT_0636: B158DRAFT_0636 - Dihydropteroate synthase (EC 2.5.1.15), at 644,837 to 645,652
_0636
B158DRAFT_0637: B158DRAFT_0637 - phosphoglucosamine mutase (EC 5.4.2.10), at 645,676 to 647,016
_0637
Position (kb) 642
643
644
645 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5
6
7 at 641.914 kb on - strand, within B158DRAFT_0633 at 641.946 kb on + strand, within B158DRAFT_0633 at 641.946 kb on + strand, within B158DRAFT_0633 at 641.946 kb on + strand, within B158DRAFT_0633 at 641.954 kb on - strand, within B158DRAFT_0633 at 641.985 kb on + strand, within B158DRAFT_0633 at 642.115 kb on + strand at 642.195 kb on + strand, within B158DRAFT_0634 at 642.195 kb on + strand, within B158DRAFT_0634 at 642.237 kb on + strand, within B158DRAFT_0634 at 642.245 kb on + strand, within B158DRAFT_0634 at 642.261 kb on - strand, within B158DRAFT_0634 at 642.290 kb on + strand, within B158DRAFT_0634 at 642.290 kb on + strand, within B158DRAFT_0634 at 642.310 kb on + strand, within B158DRAFT_0634 at 642.371 kb on - strand, within B158DRAFT_0634 at 642.427 kb on + strand, within B158DRAFT_0634 at 642.427 kb on + strand, within B158DRAFT_0634 at 642.427 kb on + strand, within B158DRAFT_0634 at 642.427 kb on + strand, within B158DRAFT_0634 at 642.427 kb on + strand, within B158DRAFT_0634 at 642.435 kb on - strand, within B158DRAFT_0634 at 642.435 kb on - strand, within B158DRAFT_0634 at 642.435 kb on - strand, within B158DRAFT_0634 at 642.435 kb on - strand, within B158DRAFT_0634 at 642.435 kb on - strand, within B158DRAFT_0634 at 642.435 kb on - strand, within B158DRAFT_0634 at 642.435 kb on - strand, within B158DRAFT_0634 at 642.440 kb on - strand, within B158DRAFT_0634 at 642.493 kb on + strand, within B158DRAFT_0634 at 642.493 kb on + strand, within B158DRAFT_0634 at 642.501 kb on - strand, within B158DRAFT_0634 at 642.521 kb on + strand, within B158DRAFT_0634 at 642.532 kb on + strand, within B158DRAFT_0634 at 642.540 kb on - strand, within B158DRAFT_0634 at 642.607 kb on - strand, within B158DRAFT_0634 at 642.706 kb on + strand at 642.706 kb on + strand at 642.706 kb on + strand at 642.706 kb on + strand at 642.706 kb on + strand at 642.714 kb on - strand at 642.714 kb on - strand at 642.714 kb on - strand at 642.714 kb on - strand at 642.747 kb on - strand at 643.192 kb on + strand, within B158DRAFT_0635 at 643.754 kb on + strand at 643.776 kb on + strand, within B158DRAFT_0635 at 644.064 kb on + strand, within B158DRAFT_0635 at 644.076 kb on + strand, within B158DRAFT_0635 at 644.104 kb on + strand, within B158DRAFT_0635 at 644.184 kb on + strand, within B158DRAFT_0635 at 644.465 kb on + strand, within B158DRAFT_0635 at 644.664 kb on + strand at 644.711 kb on + strand at 645.633 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.2 mg/ml remove 641,914 - B158DRAFT_0633 0.64 -0.4 641,946 + B158DRAFT_0633 0.74 -0.4 641,946 + B158DRAFT_0633 0.74 +0.6 641,946 + B158DRAFT_0633 0.74 +0.1 641,954 - B158DRAFT_0633 0.76 -0.8 641,985 + B158DRAFT_0633 0.85 +0.1 642,115 + -0.6 642,195 + B158DRAFT_0634 0.17 +0.8 642,195 + B158DRAFT_0634 0.17 -0.2 642,237 + B158DRAFT_0634 0.23 -0.6 642,245 + B158DRAFT_0634 0.25 -1.0 642,261 - B158DRAFT_0634 0.27 +0.3 642,290 + B158DRAFT_0634 0.32 -0.4 642,290 + B158DRAFT_0634 0.32 -0.3 642,310 + B158DRAFT_0634 0.35 +1.3 642,371 - B158DRAFT_0634 0.45 -0.8 642,427 + B158DRAFT_0634 0.54 -0.4 642,427 + B158DRAFT_0634 0.54 -0.2 642,427 + B158DRAFT_0634 0.54 -0.1 642,427 + B158DRAFT_0634 0.54 +2.4 642,427 + B158DRAFT_0634 0.54 -0.6 642,435 - B158DRAFT_0634 0.55 -2.1 642,435 - B158DRAFT_0634 0.55 -0.3 642,435 - B158DRAFT_0634 0.55 +0.1 642,435 - B158DRAFT_0634 0.55 -0.2 642,435 - B158DRAFT_0634 0.55 +1.2 642,435 - B158DRAFT_0634 0.55 +0.1 642,435 - B158DRAFT_0634 0.55 -0.5 642,440 - B158DRAFT_0634 0.56 -0.4 642,493 + B158DRAFT_0634 0.65 +0.1 642,493 + B158DRAFT_0634 0.65 -1.3 642,501 - B158DRAFT_0634 0.66 -0.1 642,521 + B158DRAFT_0634 0.69 +0.2 642,532 + B158DRAFT_0634 0.71 -0.8 642,540 - B158DRAFT_0634 0.72 +0.6 642,607 - B158DRAFT_0634 0.83 +0.1 642,706 + +0.6 642,706 + +2.2 642,706 + -2.6 642,706 + +0.0 642,706 + -0.1 642,714 - +0.5 642,714 - +0.4 642,714 - -0.4 642,714 - -0.4 642,747 - +0.2 643,192 + B158DRAFT_0635 0.17 +7.0 643,754 + +7.5 643,776 + B158DRAFT_0635 0.48 +7.1 644,064 + B158DRAFT_0635 0.63 +6.6 644,076 + B158DRAFT_0635 0.63 +7.0 644,104 + B158DRAFT_0635 0.65 +6.4 644,184 + B158DRAFT_0635 0.69 +6.5 644,465 + B158DRAFT_0635 0.83 +6.6 644,664 + +0.6 644,711 + +0.0 645,633 + +0.4
Or see this region's nucleotide sequence