Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2532

Experiment: m.b. Doxycycline hyclate 0.03125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2530 and B158DRAFT_2531 are separated by 87 nucleotidesB158DRAFT_2531 and B158DRAFT_2532 are separated by 57 nucleotidesB158DRAFT_2532 and B158DRAFT_2533 overlap by 4 nucleotidesB158DRAFT_2533 and B158DRAFT_2534 are separated by 30 nucleotides B158DRAFT_2530: B158DRAFT_2530 - nitrogen regulatory protein P-II family, at 720,811 to 721,149 _2530 B158DRAFT_2531: B158DRAFT_2531 - Beta-barrel assembly machine subunit BamD, at 721,237 to 722,043 _2531 B158DRAFT_2532: B158DRAFT_2532 - Pseudouridylate synthases, 23S RNA-specific, at 722,101 to 723,075 _2532 B158DRAFT_2533: B158DRAFT_2533 - Uncharacterized conserved protein, at 723,072 to 723,797 _2533 B158DRAFT_2534: B158DRAFT_2534 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 723,828 to 724,556 _2534 Position (kb) 722 723 724Strain fitness (log2 ratio) -2 -1 0 1at 721.123 kb on + strandat 721.196 kb on - strandat 721.196 kb on - strandat 721.230 kb on - strandat 721.258 kb on - strandat 722.114 kb on + strandat 722.130 kb on + strandat 722.134 kb on - strandat 722.159 kb on + strandat 722.271 kb on + strand, within B158DRAFT_2532at 722.285 kb on + strand, within B158DRAFT_2532at 722.331 kb on + strand, within B158DRAFT_2532at 722.339 kb on - strand, within B158DRAFT_2532at 722.458 kb on + strand, within B158DRAFT_2532at 722.466 kb on + strand, within B158DRAFT_2532at 722.466 kb on + strand, within B158DRAFT_2532at 722.471 kb on + strand, within B158DRAFT_2532at 722.471 kb on + strand, within B158DRAFT_2532at 722.474 kb on - strand, within B158DRAFT_2532at 722.526 kb on + strand, within B158DRAFT_2532at 722.672 kb on + strand, within B158DRAFT_2532at 722.672 kb on - strand, within B158DRAFT_2532at 722.723 kb on - strand, within B158DRAFT_2532at 722.734 kb on - strand, within B158DRAFT_2532at 722.803 kb on + strand, within B158DRAFT_2532at 722.803 kb on + strand, within B158DRAFT_2532at 722.803 kb on + strand, within B158DRAFT_2532at 722.803 kb on + strand, within B158DRAFT_2532at 722.811 kb on - strand, within B158DRAFT_2532at 722.811 kb on - strand, within B158DRAFT_2532at 722.811 kb on - strand, within B158DRAFT_2532at 722.854 kb on + strand, within B158DRAFT_2532at 722.854 kb on + strand, within B158DRAFT_2532at 722.854 kb on + strand, within B158DRAFT_2532at 722.854 kb on + strand, within B158DRAFT_2532at 722.854 kb on + strand, within B158DRAFT_2532at 722.862 kb on - strand, within B158DRAFT_2532at 722.862 kb on - strand, within B158DRAFT_2532at 722.875 kb on + strand, within B158DRAFT_2532at 722.878 kb on - strand, within B158DRAFT_2532at 722.881 kb on - strand, within B158DRAFT_2532at 722.881 kb on - strand, within B158DRAFT_2532at 722.881 kb on - strand, within B158DRAFT_2532at 722.922 kb on + strand, within B158DRAFT_2532at 722.957 kb on + strand, within B158DRAFT_2532at 722.957 kb on + strand, within B158DRAFT_2532at 722.957 kb on + strand, within B158DRAFT_2532at 722.957 kb on + strand, within B158DRAFT_2532at 722.957 kb on + strand, within B158DRAFT_2532at 722.965 kb on - strand, within B158DRAFT_2532at 722.965 kb on - strand, within B158DRAFT_2532at 722.967 kb on + strand, within B158DRAFT_2532at 722.967 kb on + strand, within B158DRAFT_2532at 723.057 kb on + strandat 723.065 kb on - strandat 723.092 kb on + strandat 723.100 kb on - strandat 723.167 kb on - strand, within B158DRAFT_2533at 723.177 kb on - strand, within B158DRAFT_2533at 723.307 kb on - strand, within B158DRAFT_2533at 723.345 kb on + strand, within B158DRAFT_2533at 723.353 kb on - strand, within B158DRAFT_2533at 723.353 kb on - strand, within B158DRAFT_2533at 723.353 kb on - strand, within B158DRAFT_2533at 723.361 kb on + strand, within B158DRAFT_2533at 723.385 kb on + strand, within B158DRAFT_2533at 723.385 kb on + strand, within B158DRAFT_2533at 723.385 kb on + strand, within B158DRAFT_2533at 723.385 kb on + strand, within B158DRAFT_2533at 723.393 kb on - strand, within B158DRAFT_2533at 723.449 kb on - strand, within B158DRAFT_2533at 723.451 kb on + strand, within B158DRAFT_2533at 723.494 kb on - strand, within B158DRAFT_2533at 723.496 kb on + strand, within B158DRAFT_2533at 723.496 kb on + strand, within B158DRAFT_2533at 723.497 kb on + strand, within B158DRAFT_2533at 723.518 kb on + strand, within B158DRAFT_2533at 723.526 kb on - strand, within B158DRAFT_2533at 723.552 kb on - strand, within B158DRAFT_2533at 723.620 kb on - strand, within B158DRAFT_2533at 723.682 kb on - strand, within B158DRAFT_2533at 723.698 kb on - strand, within B158DRAFT_2533at 723.707 kb on + strand, within B158DRAFT_2533at 723.712 kb on - strand, within B158DRAFT_2533at 723.731 kb on + strandat 723.731 kb on + strandat 723.731 kb on + strandat 723.731 kb on + strandat 723.731 kb on + strandat 723.739 kb on - strandat 723.739 kb on - strandat 723.754 kb on + strandat 723.760 kb on - strandat 723.846 kb on + strandat 723.929 kb on + strand, within B158DRAFT_2534at 724.016 kb on + strand, within B158DRAFT_2534at 724.016 kb on + strand, within B158DRAFT_2534at 724.033 kb on - strand, within B158DRAFT_2534at 724.068 kb on - strand, within B158DRAFT_2534

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.03125 mg/ml
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721,123 + -1.4
721,196 - -0.8
721,196 - +0.0
721,230 - +0.1
721,258 - +1.5
722,114 + -1.3
722,130 + -1.7
722,134 - -1.4
722,159 + -0.9
722,271 + B158DRAFT_2532 0.17 -0.5
722,285 + B158DRAFT_2532 0.19 -0.8
722,331 + B158DRAFT_2532 0.24 -0.4
722,339 - B158DRAFT_2532 0.24 -1.0
722,458 + B158DRAFT_2532 0.37 -0.3
722,466 + B158DRAFT_2532 0.37 -1.4
722,466 + B158DRAFT_2532 0.37 -0.5
722,471 + B158DRAFT_2532 0.38 -0.1
722,471 + B158DRAFT_2532 0.38 -1.0
722,474 - B158DRAFT_2532 0.38 -1.2
722,526 + B158DRAFT_2532 0.44 +0.0
722,672 + B158DRAFT_2532 0.59 -1.6
722,672 - B158DRAFT_2532 0.59 -0.5
722,723 - B158DRAFT_2532 0.64 -0.4
722,734 - B158DRAFT_2532 0.65 -1.5
722,803 + B158DRAFT_2532 0.72 -0.3
722,803 + B158DRAFT_2532 0.72 -0.8
722,803 + B158DRAFT_2532 0.72 +0.1
722,803 + B158DRAFT_2532 0.72 -1.1
722,811 - B158DRAFT_2532 0.73 -0.4
722,811 - B158DRAFT_2532 0.73 -2.1
722,811 - B158DRAFT_2532 0.73 -0.4
722,854 + B158DRAFT_2532 0.77 -1.0
722,854 + B158DRAFT_2532 0.77 -1.4
722,854 + B158DRAFT_2532 0.77 -1.1
722,854 + B158DRAFT_2532 0.77 -1.0
722,854 + B158DRAFT_2532 0.77 -1.1
722,862 - B158DRAFT_2532 0.78 -1.1
722,862 - B158DRAFT_2532 0.78 -1.2
722,875 + B158DRAFT_2532 0.79 -0.7
722,878 - B158DRAFT_2532 0.80 -1.6
722,881 - B158DRAFT_2532 0.80 -1.6
722,881 - B158DRAFT_2532 0.80 -1.0
722,881 - B158DRAFT_2532 0.80 -1.0
722,922 + B158DRAFT_2532 0.84 -1.1
722,957 + B158DRAFT_2532 0.88 -0.8
722,957 + B158DRAFT_2532 0.88 -0.4
722,957 + B158DRAFT_2532 0.88 -0.7
722,957 + B158DRAFT_2532 0.88 -0.6
722,957 + B158DRAFT_2532 0.88 -1.0
722,965 - B158DRAFT_2532 0.89 -1.4
722,965 - B158DRAFT_2532 0.89 -0.9
722,967 + B158DRAFT_2532 0.89 -0.4
722,967 + B158DRAFT_2532 0.89 -1.4
723,057 + +0.5
723,065 - -0.8
723,092 + -1.0
723,100 - -0.6
723,167 - B158DRAFT_2533 0.13 -1.3
723,177 - B158DRAFT_2533 0.14 -0.5
723,307 - B158DRAFT_2533 0.32 -0.3
723,345 + B158DRAFT_2533 0.38 -0.1
723,353 - B158DRAFT_2533 0.39 -0.3
723,353 - B158DRAFT_2533 0.39 -0.4
723,353 - B158DRAFT_2533 0.39 +0.1
723,361 + B158DRAFT_2533 0.40 -1.0
723,385 + B158DRAFT_2533 0.43 -0.6
723,385 + B158DRAFT_2533 0.43 -0.0
723,385 + B158DRAFT_2533 0.43 -0.2
723,385 + B158DRAFT_2533 0.43 -0.0
723,393 - B158DRAFT_2533 0.44 -0.5
723,449 - B158DRAFT_2533 0.52 +0.7
723,451 + B158DRAFT_2533 0.52 -0.1
723,494 - B158DRAFT_2533 0.58 -0.9
723,496 + B158DRAFT_2533 0.58 -0.2
723,496 + B158DRAFT_2533 0.58 +0.2
723,497 + B158DRAFT_2533 0.59 -0.2
723,518 + B158DRAFT_2533 0.61 -0.4
723,526 - B158DRAFT_2533 0.63 -0.3
723,552 - B158DRAFT_2533 0.66 -0.8
723,620 - B158DRAFT_2533 0.75 -0.9
723,682 - B158DRAFT_2533 0.84 -0.2
723,698 - B158DRAFT_2533 0.86 -1.7
723,707 + B158DRAFT_2533 0.87 -1.0
723,712 - B158DRAFT_2533 0.88 -0.7
723,731 + -0.6
723,731 + -0.1
723,731 + +0.2
723,731 + -0.4
723,731 + -0.6
723,739 - -0.6
723,739 - -0.4
723,754 + -1.0
723,760 - -0.4
723,846 + -0.4
723,929 + B158DRAFT_2534 0.14 +0.2
724,016 + B158DRAFT_2534 0.26 -0.0
724,016 + B158DRAFT_2534 0.26 -0.5
724,033 - B158DRAFT_2534 0.28 +0.2
724,068 - B158DRAFT_2534 0.33 +0.2

Or see this region's nucleotide sequence