Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2303

Experiment: m.b. Doxycycline hyclate 0.03125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2300 and B158DRAFT_2301 are separated by 77 nucleotidesB158DRAFT_2301 and B158DRAFT_2302 are separated by 26 nucleotidesB158DRAFT_2302 and B158DRAFT_2303 are separated by 3 nucleotidesB158DRAFT_2303 and B158DRAFT_2304 are separated by 86 nucleotidesB158DRAFT_2304 and B158DRAFT_2305 are separated by 37 nucleotides B158DRAFT_2300: B158DRAFT_2300 - hypothetical protein, at 463,742 to 464,131 _2300 B158DRAFT_2301: B158DRAFT_2301 - Stress-induced morphogen (activity unknown), at 464,209 to 464,472 _2301 B158DRAFT_2302: B158DRAFT_2302 - Uncharacterized protein conserved in bacteria, at 464,499 to 464,798 _2302 B158DRAFT_2303: B158DRAFT_2303 - Intracellular septation protein A, at 464,802 to 465,389 _2303 B158DRAFT_2304: B158DRAFT_2304 - Predicted metal-dependent phosphoesterases (PHP family), at 465,476 to 466,306 _2304 B158DRAFT_2305: B158DRAFT_2305 - translation factor SUA5, at 466,344 to 466,967 _2305 Position (kb) 464 465 466Strain fitness (log2 ratio) -1 0 1at 463.845 kb on + strand, within B158DRAFT_2300at 463.922 kb on + strand, within B158DRAFT_2300at 463.923 kb on - strand, within B158DRAFT_2300at 463.930 kb on - strand, within B158DRAFT_2300at 463.953 kb on + strand, within B158DRAFT_2300at 463.961 kb on - strand, within B158DRAFT_2300at 464.023 kb on + strand, within B158DRAFT_2300at 464.037 kb on + strand, within B158DRAFT_2300at 464.037 kb on + strand, within B158DRAFT_2300at 464.045 kb on - strand, within B158DRAFT_2300at 464.055 kb on + strand, within B158DRAFT_2300at 464.055 kb on + strand, within B158DRAFT_2300at 464.055 kb on - strand, within B158DRAFT_2300at 464.055 kb on - strand, within B158DRAFT_2300at 464.079 kb on + strand, within B158DRAFT_2300at 464.087 kb on - strand, within B158DRAFT_2300at 464.152 kb on + strandat 464.155 kb on + strandat 464.173 kb on - strandat 464.184 kb on + strandat 464.184 kb on + strandat 464.205 kb on + strandat 464.294 kb on + strand, within B158DRAFT_2301at 464.313 kb on + strand, within B158DRAFT_2301at 464.365 kb on + strand, within B158DRAFT_2301at 464.379 kb on - strand, within B158DRAFT_2301at 464.387 kb on - strand, within B158DRAFT_2301at 464.414 kb on + strand, within B158DRAFT_2301at 464.415 kb on + strand, within B158DRAFT_2301at 464.417 kb on - strand, within B158DRAFT_2301at 464.421 kb on - strand, within B158DRAFT_2301at 464.422 kb on - strand, within B158DRAFT_2301at 464.423 kb on - strand, within B158DRAFT_2301at 464.424 kb on - strand, within B158DRAFT_2301at 464.448 kb on + strandat 464.497 kb on + strandat 464.540 kb on + strand, within B158DRAFT_2302at 464.548 kb on - strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.581 kb on + strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.588 kb on - strand, within B158DRAFT_2302at 464.633 kb on + strand, within B158DRAFT_2302at 464.668 kb on + strand, within B158DRAFT_2302at 464.668 kb on + strand, within B158DRAFT_2302at 464.670 kb on + strand, within B158DRAFT_2302at 464.671 kb on - strand, within B158DRAFT_2302at 464.676 kb on - strand, within B158DRAFT_2302at 464.676 kb on - strand, within B158DRAFT_2302at 464.676 kb on - strand, within B158DRAFT_2302at 464.676 kb on - strand, within B158DRAFT_2302at 464.682 kb on - strand, within B158DRAFT_2302at 464.718 kb on - strand, within B158DRAFT_2302at 464.734 kb on + strand, within B158DRAFT_2302at 464.734 kb on - strand, within B158DRAFT_2302at 464.734 kb on - strand, within B158DRAFT_2302at 464.823 kb on - strandat 464.837 kb on + strandat 464.892 kb on - strand, within B158DRAFT_2303at 464.909 kb on - strand, within B158DRAFT_2303at 464.942 kb on - strand, within B158DRAFT_2303at 464.950 kb on - strand, within B158DRAFT_2303at 464.963 kb on - strand, within B158DRAFT_2303at 464.963 kb on - strand, within B158DRAFT_2303at 464.965 kb on + strand, within B158DRAFT_2303at 464.973 kb on - strand, within B158DRAFT_2303at 464.982 kb on + strand, within B158DRAFT_2303at 464.994 kb on + strand, within B158DRAFT_2303at 465.059 kb on + strand, within B158DRAFT_2303at 465.061 kb on + strand, within B158DRAFT_2303at 465.136 kb on + strand, within B158DRAFT_2303at 465.187 kb on - strand, within B158DRAFT_2303at 465.200 kb on - strand, within B158DRAFT_2303at 465.270 kb on + strand, within B158DRAFT_2303at 465.315 kb on - strand, within B158DRAFT_2303at 465.385 kb on + strandat 465.392 kb on - strandat 465.392 kb on - strandat 465.425 kb on - strandat 465.476 kb on - strandat 465.495 kb on + strandat 465.537 kb on + strandat 465.556 kb on + strandat 465.561 kb on + strand, within B158DRAFT_2304at 465.569 kb on - strand, within B158DRAFT_2304at 465.599 kb on - strand, within B158DRAFT_2304at 465.634 kb on - strand, within B158DRAFT_2304at 465.665 kb on - strand, within B158DRAFT_2304at 465.684 kb on + strand, within B158DRAFT_2304at 465.684 kb on + strand, within B158DRAFT_2304at 465.692 kb on - strand, within B158DRAFT_2304at 465.692 kb on - strand, within B158DRAFT_2304at 465.692 kb on - strand, within B158DRAFT_2304at 465.692 kb on - strand, within B158DRAFT_2304at 465.767 kb on + strand, within B158DRAFT_2304at 465.813 kb on + strand, within B158DRAFT_2304at 465.821 kb on - strand, within B158DRAFT_2304at 465.859 kb on + strand, within B158DRAFT_2304at 465.859 kb on + strand, within B158DRAFT_2304at 465.884 kb on + strand, within B158DRAFT_2304at 465.884 kb on + strand, within B158DRAFT_2304at 465.884 kb on + strand, within B158DRAFT_2304at 465.884 kb on + strand, within B158DRAFT_2304at 465.886 kb on - strand, within B158DRAFT_2304at 465.892 kb on - strand, within B158DRAFT_2304at 465.892 kb on - strand, within B158DRAFT_2304at 465.892 kb on - strand, within B158DRAFT_2304at 465.892 kb on - strand, within B158DRAFT_2304at 465.898 kb on + strand, within B158DRAFT_2304at 465.898 kb on + strand, within B158DRAFT_2304at 465.989 kb on - strand, within B158DRAFT_2304at 466.042 kb on - strand, within B158DRAFT_2304at 466.047 kb on - strand, within B158DRAFT_2304at 466.047 kb on - strand, within B158DRAFT_2304at 466.073 kb on - strand, within B158DRAFT_2304at 466.087 kb on + strand, within B158DRAFT_2304at 466.096 kb on - strand, within B158DRAFT_2304at 466.096 kb on - strand, within B158DRAFT_2304at 466.119 kb on + strand, within B158DRAFT_2304at 466.129 kb on + strand, within B158DRAFT_2304at 466.137 kb on - strand, within B158DRAFT_2304at 466.137 kb on - strand, within B158DRAFT_2304at 466.153 kb on - strand, within B158DRAFT_2304at 466.185 kb on + strand, within B158DRAFT_2304at 466.193 kb on - strand, within B158DRAFT_2304at 466.200 kb on + strand, within B158DRAFT_2304at 466.209 kb on + strand, within B158DRAFT_2304at 466.217 kb on - strand, within B158DRAFT_2304at 466.234 kb on + strandat 466.234 kb on + strandat 466.234 kb on + strandat 466.234 kb on + strandat 466.234 kb on + strandat 466.234 kb on + strandat 466.234 kb on + strandat 466.234 kb on + strandat 466.234 kb on + strandat 466.234 kb on + strandat 466.235 kb on + strandat 466.235 kb on + strandat 466.235 kb on + strandat 466.237 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.243 kb on - strandat 466.276 kb on + strandat 466.276 kb on + strandat 466.276 kb on + strandat 466.283 kb on - strandat 466.284 kb on - strandat 466.284 kb on - strandat 466.284 kb on - strandat 466.284 kb on - strandat 466.284 kb on - strandat 466.312 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.03125 mg/ml
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463,845 + B158DRAFT_2300 0.26 -0.1
463,922 + B158DRAFT_2300 0.46 -0.4
463,923 - B158DRAFT_2300 0.46 -0.8
463,930 - B158DRAFT_2300 0.48 -0.2
463,953 + B158DRAFT_2300 0.54 -0.2
463,961 - B158DRAFT_2300 0.56 -0.7
464,023 + B158DRAFT_2300 0.72 -0.1
464,037 + B158DRAFT_2300 0.76 +0.0
464,037 + B158DRAFT_2300 0.76 +0.0
464,045 - B158DRAFT_2300 0.78 +0.6
464,055 + B158DRAFT_2300 0.80 -0.5
464,055 + B158DRAFT_2300 0.80 +0.3
464,055 - B158DRAFT_2300 0.80 -0.2
464,055 - B158DRAFT_2300 0.80 +0.4
464,079 + B158DRAFT_2300 0.86 -0.3
464,087 - B158DRAFT_2300 0.88 -0.1
464,152 + -0.1
464,155 + -0.2
464,173 - +0.4
464,184 + +0.1
464,184 + -0.1
464,205 + -0.1
464,294 + B158DRAFT_2301 0.32 -0.4
464,313 + B158DRAFT_2301 0.39 +0.1
464,365 + B158DRAFT_2301 0.59 -0.4
464,379 - B158DRAFT_2301 0.64 +0.3
464,387 - B158DRAFT_2301 0.67 -0.6
464,414 + B158DRAFT_2301 0.78 +0.1
464,415 + B158DRAFT_2301 0.78 -0.1
464,417 - B158DRAFT_2301 0.79 -0.1
464,421 - B158DRAFT_2301 0.80 -0.6
464,422 - B158DRAFT_2301 0.81 +0.1
464,423 - B158DRAFT_2301 0.81 -0.5
464,424 - B158DRAFT_2301 0.81 +0.6
464,448 + +0.8
464,497 + +0.2
464,540 + B158DRAFT_2302 0.14 +0.1
464,548 - B158DRAFT_2302 0.16 +1.3
464,575 + B158DRAFT_2302 0.25 +0.1
464,575 + B158DRAFT_2302 0.25 -0.1
464,575 + B158DRAFT_2302 0.25 -0.1
464,575 + B158DRAFT_2302 0.25 +0.4
464,575 + B158DRAFT_2302 0.25 +0.4
464,575 + B158DRAFT_2302 0.25 -0.3
464,575 + B158DRAFT_2302 0.25 -0.1
464,575 + B158DRAFT_2302 0.25 -0.6
464,575 + B158DRAFT_2302 0.25 -0.6
464,575 + B158DRAFT_2302 0.25 -0.1
464,575 + B158DRAFT_2302 0.25 -0.1
464,575 + B158DRAFT_2302 0.25 -0.4
464,575 + B158DRAFT_2302 0.25 +0.3
464,575 + B158DRAFT_2302 0.25 +0.3
464,575 + B158DRAFT_2302 0.25 -1.0
464,575 + B158DRAFT_2302 0.25 -0.1
464,575 + B158DRAFT_2302 0.25 -0.3
464,575 + B158DRAFT_2302 0.25 +0.6
464,581 + B158DRAFT_2302 0.27 -0.3
464,583 - B158DRAFT_2302 0.28 -1.3
464,583 - B158DRAFT_2302 0.28 -0.2
464,583 - B158DRAFT_2302 0.28 -0.4
464,583 - B158DRAFT_2302 0.28 -0.5
464,583 - B158DRAFT_2302 0.28 -0.3
464,583 - B158DRAFT_2302 0.28 +0.1
464,583 - B158DRAFT_2302 0.28 +0.1
464,583 - B158DRAFT_2302 0.28 +0.1
464,583 - B158DRAFT_2302 0.28 +0.2
464,583 - B158DRAFT_2302 0.28 +0.0
464,583 - B158DRAFT_2302 0.28 -0.3
464,583 - B158DRAFT_2302 0.28 -0.3
464,583 - B158DRAFT_2302 0.28 -0.3
464,583 - B158DRAFT_2302 0.28 +0.5
464,583 - B158DRAFT_2302 0.28 -0.2
464,583 - B158DRAFT_2302 0.28 +0.0
464,583 - B158DRAFT_2302 0.28 -0.3
464,588 - B158DRAFT_2302 0.30 +0.2
464,633 + B158DRAFT_2302 0.45 +0.1
464,668 + B158DRAFT_2302 0.56 -0.2
464,668 + B158DRAFT_2302 0.56 +0.3
464,670 + B158DRAFT_2302 0.57 +0.5
464,671 - B158DRAFT_2302 0.57 -0.7
464,676 - B158DRAFT_2302 0.59 -0.5
464,676 - B158DRAFT_2302 0.59 -0.8
464,676 - B158DRAFT_2302 0.59 +0.1
464,676 - B158DRAFT_2302 0.59 -0.1
464,682 - B158DRAFT_2302 0.61 -0.5
464,718 - B158DRAFT_2302 0.73 -0.9
464,734 + B158DRAFT_2302 0.78 -0.1
464,734 - B158DRAFT_2302 0.78 -1.6
464,734 - B158DRAFT_2302 0.78 -0.4
464,823 - +1.2
464,837 + -0.2
464,892 - B158DRAFT_2303 0.15 -0.1
464,909 - B158DRAFT_2303 0.18 +0.0
464,942 - B158DRAFT_2303 0.24 +0.4
464,950 - B158DRAFT_2303 0.25 -0.4
464,963 - B158DRAFT_2303 0.27 -0.4
464,963 - B158DRAFT_2303 0.27 +0.3
464,965 + B158DRAFT_2303 0.28 +0.1
464,973 - B158DRAFT_2303 0.29 +0.1
464,982 + B158DRAFT_2303 0.31 +0.2
464,994 + B158DRAFT_2303 0.33 -0.2
465,059 + B158DRAFT_2303 0.44 +0.4
465,061 + B158DRAFT_2303 0.44 +0.0
465,136 + B158DRAFT_2303 0.57 +0.1
465,187 - B158DRAFT_2303 0.65 +0.0
465,200 - B158DRAFT_2303 0.68 +0.2
465,270 + B158DRAFT_2303 0.80 +0.1
465,315 - B158DRAFT_2303 0.87 -0.6
465,385 + +0.1
465,392 - -0.3
465,392 - +0.2
465,425 - -0.4
465,476 - -0.4
465,495 + -0.1
465,537 + -0.3
465,556 + -0.2
465,561 + B158DRAFT_2304 0.10 -1.0
465,569 - B158DRAFT_2304 0.11 +0.5
465,599 - B158DRAFT_2304 0.15 -0.4
465,634 - B158DRAFT_2304 0.19 +0.1
465,665 - B158DRAFT_2304 0.23 -0.2
465,684 + B158DRAFT_2304 0.25 +0.7
465,684 + B158DRAFT_2304 0.25 +0.3
465,692 - B158DRAFT_2304 0.26 -0.6
465,692 - B158DRAFT_2304 0.26 -0.1
465,692 - B158DRAFT_2304 0.26 +0.0
465,692 - B158DRAFT_2304 0.26 +0.1
465,767 + B158DRAFT_2304 0.35 -0.7
465,813 + B158DRAFT_2304 0.41 -0.2
465,821 - B158DRAFT_2304 0.42 -0.2
465,859 + B158DRAFT_2304 0.46 +0.3
465,859 + B158DRAFT_2304 0.46 -0.0
465,884 + B158DRAFT_2304 0.49 -0.5
465,884 + B158DRAFT_2304 0.49 +0.1
465,884 + B158DRAFT_2304 0.49 +0.0
465,884 + B158DRAFT_2304 0.49 +0.2
465,886 - B158DRAFT_2304 0.49 +0.3
465,892 - B158DRAFT_2304 0.50 +0.0
465,892 - B158DRAFT_2304 0.50 -0.1
465,892 - B158DRAFT_2304 0.50 +0.1
465,892 - B158DRAFT_2304 0.50 -0.0
465,898 + B158DRAFT_2304 0.51 -0.0
465,898 + B158DRAFT_2304 0.51 +0.0
465,989 - B158DRAFT_2304 0.62 -0.0
466,042 - B158DRAFT_2304 0.68 +0.1
466,047 - B158DRAFT_2304 0.69 -0.6
466,047 - B158DRAFT_2304 0.69 -0.1
466,073 - B158DRAFT_2304 0.72 +0.1
466,087 + B158DRAFT_2304 0.74 +0.7
466,096 - B158DRAFT_2304 0.75 -0.5
466,096 - B158DRAFT_2304 0.75 -0.7
466,119 + B158DRAFT_2304 0.77 -1.5
466,129 + B158DRAFT_2304 0.79 +0.2
466,137 - B158DRAFT_2304 0.80 -0.2
466,137 - B158DRAFT_2304 0.80 -0.8
466,153 - B158DRAFT_2304 0.81 +0.1
466,185 + B158DRAFT_2304 0.85 +0.0
466,193 - B158DRAFT_2304 0.86 -0.2
466,200 + B158DRAFT_2304 0.87 -0.4
466,209 + B158DRAFT_2304 0.88 -0.1
466,217 - B158DRAFT_2304 0.89 -0.6
466,234 + +0.9
466,234 + +0.1
466,234 + +0.6
466,234 + +0.7
466,234 + +0.3
466,234 + -0.8
466,234 + +1.1
466,234 + +0.0
466,234 + -0.0
466,234 + -0.8
466,235 + -0.1
466,235 + -0.1
466,235 + +0.7
466,237 - -0.4
466,242 - +0.4
466,242 - +0.4
466,242 - -0.0
466,242 - -0.3
466,242 - -0.0
466,242 - -0.3
466,242 - -0.7
466,242 - +0.1
466,242 - +0.1
466,242 - -0.0
466,242 - +0.6
466,242 - +0.4
466,242 - -0.3
466,243 - +0.2
466,276 + +0.5
466,276 + -0.1
466,276 + +0.1
466,283 - +0.1
466,284 - +0.2
466,284 - +0.2
466,284 - +0.2
466,284 - -0.4
466,284 - +0.3
466,312 + -0.1

Or see this region's nucleotide sequence