Experiment: m.b. Doxycycline hyclate 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1981 and B158DRAFT_1982 are separated by 72 nucleotides B158DRAFT_1982 and B158DRAFT_1983 are separated by 45 nucleotides B158DRAFT_1983 and B158DRAFT_1984 are separated by 162 nucleotides
B158DRAFT_1981: B158DRAFT_1981 - coproporphyrinogen III oxidase, anaerobic (EC 1.3.99.22), at 117,290 to 118,666
_1981
B158DRAFT_1982: B158DRAFT_1982 - cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases, at 118,739 to 119,452
_1982
B158DRAFT_1983: B158DRAFT_1983 - Protein of unknown function (DUF1282)., at 119,498 to 120,094
_1983
B158DRAFT_1984: B158DRAFT_1984 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 120,257 to 121,018
_1984
Position (kb) 118
119
120 Strain fitness (log2 ratio) -2
-1
0
1
2 at 117.755 kb on + strand, within B158DRAFT_1981 at 117.816 kb on + strand, within B158DRAFT_1981 at 117.922 kb on + strand, within B158DRAFT_1981 at 118.007 kb on + strand, within B158DRAFT_1981 at 118.007 kb on + strand, within B158DRAFT_1981 at 118.015 kb on - strand, within B158DRAFT_1981 at 118.051 kb on - strand, within B158DRAFT_1981 at 118.067 kb on - strand, within B158DRAFT_1981 at 118.191 kb on - strand, within B158DRAFT_1981 at 118.225 kb on + strand, within B158DRAFT_1981 at 118.225 kb on + strand, within B158DRAFT_1981 at 118.225 kb on + strand, within B158DRAFT_1981 at 118.233 kb on - strand, within B158DRAFT_1981 at 118.233 kb on - strand, within B158DRAFT_1981 at 118.233 kb on - strand, within B158DRAFT_1981 at 118.244 kb on + strand, within B158DRAFT_1981 at 118.317 kb on + strand, within B158DRAFT_1981 at 118.325 kb on - strand, within B158DRAFT_1981 at 118.325 kb on - strand, within B158DRAFT_1981 at 118.325 kb on - strand, within B158DRAFT_1981 at 118.325 kb on - strand, within B158DRAFT_1981 at 118.325 kb on - strand, within B158DRAFT_1981 at 118.352 kb on - strand, within B158DRAFT_1981 at 118.532 kb on + strand at 118.585 kb on - strand at 118.709 kb on - strand at 118.709 kb on - strand at 118.718 kb on + strand at 118.736 kb on - strand at 118.808 kb on - strand at 118.818 kb on - strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.926 kb on + strand, within B158DRAFT_1982 at 118.934 kb on - strand, within B158DRAFT_1982 at 118.934 kb on - strand, within B158DRAFT_1982 at 118.934 kb on - strand, within B158DRAFT_1982 at 118.961 kb on + strand, within B158DRAFT_1982 at 118.969 kb on - strand, within B158DRAFT_1982 at 118.969 kb on - strand, within B158DRAFT_1982 at 119.006 kb on + strand, within B158DRAFT_1982 at 119.009 kb on - strand, within B158DRAFT_1982 at 119.027 kb on + strand, within B158DRAFT_1982 at 119.063 kb on - strand, within B158DRAFT_1982 at 119.070 kb on - strand, within B158DRAFT_1982 at 119.070 kb on - strand, within B158DRAFT_1982 at 119.070 kb on - strand, within B158DRAFT_1982 at 119.115 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.279 kb on - strand, within B158DRAFT_1982 at 119.279 kb on - strand, within B158DRAFT_1982 at 119.279 kb on - strand, within B158DRAFT_1982 at 119.279 kb on - strand, within B158DRAFT_1982 at 119.279 kb on - strand, within B158DRAFT_1982 at 119.339 kb on - strand, within B158DRAFT_1982 at 119.442 kb on - strand at 119.480 kb on + strand at 119.480 kb on + strand at 119.480 kb on + strand at 119.488 kb on + strand at 119.488 kb on - strand at 119.488 kb on - strand at 119.488 kb on - strand at 119.488 kb on - strand at 119.491 kb on - strand at 119.491 kb on - strand at 119.546 kb on - strand at 119.606 kb on + strand, within B158DRAFT_1983 at 119.614 kb on - strand, within B158DRAFT_1983 at 119.642 kb on + strand, within B158DRAFT_1983 at 119.642 kb on + strand, within B158DRAFT_1983 at 119.642 kb on + strand, within B158DRAFT_1983 at 119.642 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.691 kb on + strand, within B158DRAFT_1983 at 119.785 kb on - strand, within B158DRAFT_1983 at 119.887 kb on + strand, within B158DRAFT_1983 at 119.892 kb on + strand, within B158DRAFT_1983 at 119.895 kb on - strand, within B158DRAFT_1983 at 119.895 kb on - strand, within B158DRAFT_1983 at 119.897 kb on + strand, within B158DRAFT_1983 at 119.897 kb on + strand, within B158DRAFT_1983 at 119.905 kb on - strand, within B158DRAFT_1983 at 119.915 kb on - strand, within B158DRAFT_1983 at 119.918 kb on + strand, within B158DRAFT_1983 at 119.997 kb on + strand, within B158DRAFT_1983 at 120.009 kb on + strand, within B158DRAFT_1983 at 120.015 kb on + strand, within B158DRAFT_1983 at 120.033 kb on - strand, within B158DRAFT_1983 at 120.048 kb on + strand at 120.080 kb on + strand at 120.080 kb on + strand at 120.088 kb on - strand at 120.088 kb on - strand at 120.088 kb on - strand at 120.149 kb on - strand at 120.153 kb on + strand at 120.153 kb on + strand at 120.161 kb on - strand at 120.161 kb on - strand at 120.161 kb on - strand at 120.161 kb on - strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.325 kb on - strand at 120.327 kb on + strand at 120.335 kb on - strand, within B158DRAFT_1984 at 120.335 kb on - strand, within B158DRAFT_1984 at 120.387 kb on - strand, within B158DRAFT_1984 at 120.451 kb on - strand, within B158DRAFT_1984
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.03125 mg/ml remove 117,755 + B158DRAFT_1981 0.34 -0.5 117,816 + B158DRAFT_1981 0.38 -0.2 117,922 + B158DRAFT_1981 0.46 -0.2 118,007 + B158DRAFT_1981 0.52 -0.3 118,007 + B158DRAFT_1981 0.52 +0.9 118,015 - B158DRAFT_1981 0.53 +0.2 118,051 - B158DRAFT_1981 0.55 -0.3 118,067 - B158DRAFT_1981 0.56 -0.3 118,191 - B158DRAFT_1981 0.65 -0.3 118,225 + B158DRAFT_1981 0.68 +0.2 118,225 + B158DRAFT_1981 0.68 +0.1 118,225 + B158DRAFT_1981 0.68 -0.1 118,233 - B158DRAFT_1981 0.68 +0.1 118,233 - B158DRAFT_1981 0.68 +0.2 118,233 - B158DRAFT_1981 0.68 -0.2 118,244 + B158DRAFT_1981 0.69 +0.1 118,317 + B158DRAFT_1981 0.75 -0.5 118,325 - B158DRAFT_1981 0.75 -0.6 118,325 - B158DRAFT_1981 0.75 -0.3 118,325 - B158DRAFT_1981 0.75 -0.7 118,325 - B158DRAFT_1981 0.75 -0.8 118,325 - B158DRAFT_1981 0.75 -0.5 118,352 - B158DRAFT_1981 0.77 +0.7 118,532 + -0.1 118,585 - +0.1 118,709 - -0.5 118,709 - -0.3 118,718 + -0.4 118,736 - -1.3 118,808 - -0.5 118,818 - B158DRAFT_1982 0.11 -0.3 118,833 + B158DRAFT_1982 0.13 -0.4 118,833 + B158DRAFT_1982 0.13 +0.1 118,833 + B158DRAFT_1982 0.13 -0.5 118,833 + B158DRAFT_1982 0.13 -0.0 118,833 + B158DRAFT_1982 0.13 -1.1 118,833 + B158DRAFT_1982 0.13 -0.7 118,833 + B158DRAFT_1982 0.13 -0.8 118,833 + B158DRAFT_1982 0.13 -1.2 118,833 + B158DRAFT_1982 0.13 +0.3 118,833 + B158DRAFT_1982 0.13 +0.6 118,833 + B158DRAFT_1982 0.13 +0.1 118,833 + B158DRAFT_1982 0.13 -0.9 118,841 - B158DRAFT_1982 0.14 -0.5 118,841 - B158DRAFT_1982 0.14 -0.2 118,841 - B158DRAFT_1982 0.14 -2.1 118,841 - B158DRAFT_1982 0.14 +0.0 118,841 - B158DRAFT_1982 0.14 -0.5 118,841 - B158DRAFT_1982 0.14 -0.4 118,841 - B158DRAFT_1982 0.14 -0.6 118,841 - B158DRAFT_1982 0.14 -1.0 118,841 - B158DRAFT_1982 0.14 -0.5 118,841 - B158DRAFT_1982 0.14 -0.9 118,841 - B158DRAFT_1982 0.14 -0.5 118,841 - B158DRAFT_1982 0.14 -0.3 118,841 - B158DRAFT_1982 0.14 -0.1 118,841 - B158DRAFT_1982 0.14 -0.9 118,926 + B158DRAFT_1982 0.26 -0.5 118,934 - B158DRAFT_1982 0.27 -0.4 118,934 - B158DRAFT_1982 0.27 -0.3 118,934 - B158DRAFT_1982 0.27 -0.8 118,961 + B158DRAFT_1982 0.31 -0.3 118,969 - B158DRAFT_1982 0.32 -0.4 118,969 - B158DRAFT_1982 0.32 -0.9 119,006 + B158DRAFT_1982 0.37 -1.5 119,009 - B158DRAFT_1982 0.38 -0.1 119,027 + B158DRAFT_1982 0.40 -0.7 119,063 - B158DRAFT_1982 0.45 -1.2 119,070 - B158DRAFT_1982 0.46 -0.6 119,070 - B158DRAFT_1982 0.46 -0.4 119,070 - B158DRAFT_1982 0.46 -0.6 119,115 + B158DRAFT_1982 0.53 -0.1 119,271 + B158DRAFT_1982 0.75 -0.8 119,271 + B158DRAFT_1982 0.75 -0.3 119,271 + B158DRAFT_1982 0.75 +0.4 119,271 + B158DRAFT_1982 0.75 -0.8 119,271 + B158DRAFT_1982 0.75 +0.2 119,271 + B158DRAFT_1982 0.75 -1.0 119,271 + B158DRAFT_1982 0.75 -1.0 119,271 + B158DRAFT_1982 0.75 -0.7 119,271 + B158DRAFT_1982 0.75 -0.7 119,279 - B158DRAFT_1982 0.76 -1.3 119,279 - B158DRAFT_1982 0.76 -0.9 119,279 - B158DRAFT_1982 0.76 -1.2 119,279 - B158DRAFT_1982 0.76 -2.7 119,279 - B158DRAFT_1982 0.76 -1.1 119,339 - B158DRAFT_1982 0.84 +0.8 119,442 - -0.3 119,480 + +0.5 119,480 + -0.0 119,480 + -0.4 119,488 + -0.6 119,488 - +0.1 119,488 - -0.2 119,488 - +0.1 119,488 - -0.2 119,491 - -0.4 119,491 - +0.0 119,546 - -0.9 119,606 + B158DRAFT_1983 0.18 +0.3 119,614 - B158DRAFT_1983 0.19 -0.3 119,642 + B158DRAFT_1983 0.24 +0.3 119,642 + B158DRAFT_1983 0.24 -0.3 119,642 + B158DRAFT_1983 0.24 +0.0 119,642 + B158DRAFT_1983 0.24 +0.7 119,644 + B158DRAFT_1983 0.24 +0.1 119,644 + B158DRAFT_1983 0.24 +0.2 119,644 + B158DRAFT_1983 0.24 -0.3 119,644 + B158DRAFT_1983 0.24 -0.4 119,644 + B158DRAFT_1983 0.24 +0.5 119,644 + B158DRAFT_1983 0.24 -0.9 119,644 + B158DRAFT_1983 0.24 -0.8 119,644 + B158DRAFT_1983 0.24 -0.4 119,650 - B158DRAFT_1983 0.25 +0.3 119,650 - B158DRAFT_1983 0.25 +0.2 119,650 - B158DRAFT_1983 0.25 +0.5 119,650 - B158DRAFT_1983 0.25 -0.5 119,650 - B158DRAFT_1983 0.25 +0.3 119,650 - B158DRAFT_1983 0.25 +0.1 119,650 - B158DRAFT_1983 0.25 +0.3 119,650 - B158DRAFT_1983 0.25 -1.5 119,650 - B158DRAFT_1983 0.25 -0.7 119,652 - B158DRAFT_1983 0.26 +1.1 119,652 - B158DRAFT_1983 0.26 -0.5 119,652 - B158DRAFT_1983 0.26 -0.2 119,652 - B158DRAFT_1983 0.26 -0.4 119,652 - B158DRAFT_1983 0.26 -0.3 119,652 - B158DRAFT_1983 0.26 -0.2 119,652 - B158DRAFT_1983 0.26 -0.0 119,652 - B158DRAFT_1983 0.26 -0.0 119,652 - B158DRAFT_1983 0.26 -0.2 119,652 - B158DRAFT_1983 0.26 -0.1 119,691 + B158DRAFT_1983 0.32 +0.5 119,785 - B158DRAFT_1983 0.48 -0.2 119,887 + B158DRAFT_1983 0.65 -0.2 119,892 + B158DRAFT_1983 0.66 +1.6 119,895 - B158DRAFT_1983 0.66 -0.3 119,895 - B158DRAFT_1983 0.66 +0.7 119,897 + B158DRAFT_1983 0.67 +0.2 119,897 + B158DRAFT_1983 0.67 -0.4 119,905 - B158DRAFT_1983 0.68 -0.4 119,915 - B158DRAFT_1983 0.70 -0.2 119,918 + B158DRAFT_1983 0.70 -0.7 119,997 + B158DRAFT_1983 0.84 +0.2 120,009 + B158DRAFT_1983 0.86 -0.1 120,015 + B158DRAFT_1983 0.87 +1.2 120,033 - B158DRAFT_1983 0.90 -0.1 120,048 + +0.0 120,080 + -0.6 120,080 + +0.1 120,088 - +0.4 120,088 - -0.0 120,088 - +0.1 120,149 - -0.0 120,153 + -0.3 120,153 + -1.0 120,161 - -0.0 120,161 - +0.3 120,161 - -0.2 120,161 - +0.1 120,189 + -0.6 120,189 + -0.1 120,189 + +0.6 120,189 + +0.6 120,189 + -0.3 120,189 + +0.0 120,189 + -0.0 120,189 + -0.5 120,189 + +0.0 120,189 + -0.6 120,189 + +0.1 120,189 + -0.2 120,189 + +0.8 120,189 + -0.1 120,189 + -0.0 120,189 + +2.3 120,189 + -0.4 120,189 + -0.2 120,189 + +0.0 120,189 + -0.1 120,189 + -0.2 120,189 + -0.8 120,189 + +0.0 120,189 + +0.0 120,189 + +0.4 120,189 + +0.1 120,189 + -0.2 120,189 + -0.0 120,189 + -0.2 120,189 + +0.1 120,197 - -0.1 120,197 - -0.7 120,197 - -0.3 120,197 - -0.4 120,197 - -0.3 120,197 - -0.5 120,197 - +1.4 120,197 - -0.0 120,197 - +0.3 120,197 - +0.0 120,197 - -0.3 120,197 - -0.4 120,197 - +0.1 120,197 - -0.2 120,197 - -0.1 120,197 - -0.3 120,197 - -0.7 120,197 - -0.2 120,197 - -0.4 120,197 - +0.0 120,197 - -0.6 120,197 - -0.5 120,197 - -0.5 120,197 - +0.2 120,197 - -0.1 120,197 - +0.8 120,197 - -0.1 120,197 - +0.5 120,197 - -0.0 120,197 - -0.2 120,197 - +0.1 120,197 - +0.1 120,325 - +0.3 120,327 + -0.5 120,335 - B158DRAFT_1984 0.10 +0.5 120,335 - B158DRAFT_1984 0.10 +0.2 120,387 - B158DRAFT_1984 0.17 -0.0 120,451 - B158DRAFT_1984 0.25 -0.6
Or see this region's nucleotide sequence